RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 FOXD1Q16676 465 aa16.55■□□□□ 0.24
CCDC144A-203ENST00000360495 PLIN1O60240 522 aa16.55■□□□□ 0.24
CCDC144A-203ENST00000360495 RASSF8Q8NHQ8 419 aa16.55■□□□□ 0.24
CCDC144A-203ENST00000360495 KIF3AQ9Y496 699 aa16.54■□□□□ 0.24
CCDC144A-203ENST00000360495 NOM1Q5C9Z4 860 aaKnown RBP16.54■□□□□ 0.24
CCDC144A-203ENST00000360495 CRBNQ96SW2 442 aa16.54■□□□□ 0.24
CCDC144A-203ENST00000360495 ROCK2O75116 1388 aaKnown RBP16.54■□□□□ 0.24
CCDC144A-203ENST00000360495 CCDC70Q6NSX1 233 aa16.53■□□□□ 0.24
CCDC144A-203ENST00000360495 PODXL2Q9NZ53 605 aa16.53■□□□□ 0.24
CCDC144A-203ENST00000360495 IL27Q8NEV9 243 aa16.52■□□□□ 0.24
CCDC144A-203ENST00000360495 BRPF3Q9ULD4 1205 aa16.52■□□□□ 0.24
CCDC144A-203ENST00000360495 SAFB2Q14151 953 aaKnown RBP eCLIP16.52■□□□□ 0.23
CCDC144A-203ENST00000360495 FHAD1B1AJZ9 1412 aa16.52■□□□□ 0.23
CCDC144A-203ENST00000360495 ZBED9Q6R2W3 1325 aa16.52■□□□□ 0.23
CCDC144A-203ENST00000360495 TPM2P07951 284 aa16.52■□□□□ 0.23
CCDC144A-203ENST00000360495 PKD2Q13563 968 aa16.52■□□□□ 0.23
CCDC144A-203ENST00000360495 H3BQV1 296 aa16.51■□□□□ 0.23
CCDC144A-203ENST00000360495 IFFO2Q5TF58 517 aa16.51■□□□□ 0.23
CCDC144A-203ENST00000360495 STK31Q9BXU1 1019 aa16.51■□□□□ 0.23
CCDC144A-203ENST00000360495 MRE11P49959 708 aa16.51■□□□□ 0.23
CCDC144A-203ENST00000360495 TSR1Q2NL82 804 aaKnown RBP16.51■□□□□ 0.23
CCDC144A-203ENST00000360495 PES1O00541 588 aaKnown RBP16.51■□□□□ 0.23
CCDC144A-203ENST00000360495 PHLDB1Q86UU1 1377 aa16.5■□□□□ 0.23
CCDC144A-203ENST00000360495 HOMER1Q86YM7 354 aa16.5■□□□□ 0.23
CCDC144A-203ENST00000360495 APPP05067 770 aa16.5■□□□□ 0.23
CCDC144A-203ENST00000360495 CEP89Q96ST8 783 aa16.5■□□□□ 0.23
CCDC144A-203ENST00000360495 TPD52L1Q16890 204 aaPredicted RBP16.49■□□□□ 0.23
CCDC144A-203ENST00000360495 TPM1P09493 284 aa16.49■□□□□ 0.23
CCDC144A-203ENST00000360495 ARGLU1Q9NWB6 273 aaPredicted RBP16.49■□□□□ 0.23
CCDC144A-203ENST00000360495 SLC4A10Q6U841 1118 aa16.48■□□□□ 0.23
CCDC144A-203ENST00000360495 HDGFL2Q7Z4V5 671 aaPredicted RBP16.48■□□□□ 0.23
CCDC144A-203ENST00000360495 VPS8Q8N3P4 1428 aa16.48■□□□□ 0.23
CCDC144A-203ENST00000360495 ANKRD45Q5TZF3 282 aa16.48■□□□□ 0.23
CCDC144A-203ENST00000360495 DIAPH3Q9NSV4 1193 aa16.48■□□□□ 0.23
CCDC144A-203ENST00000360495 CCDC66A2RUB6 948 aa16.47■□□□□ 0.23
CCDC144A-203ENST00000360495 GORABQ5T7V8 394 aa16.47■□□□□ 0.23
CCDC144A-203ENST00000360495 MPHOSPH9Q99550 1183 aa16.46■□□□□ 0.23
CCDC144A-203ENST00000360495 BAZ1BQ9UIG0 1483 aaKnown RBP16.46■□□□□ 0.23
CCDC144A-203ENST00000360495 FAM184AQ8NB25 1140 aa16.46■□□□□ 0.23
CCDC144A-203ENST00000360495 IFT57Q9NWB7 429 aa16.46■□□□□ 0.23
CCDC144A-203ENST00000360495 ARHGAP35Q9NRY4 1499 aa16.46■□□□□ 0.23
CCDC144A-203ENST00000360495 MYBBP1AQ9BQG0 1328 aaKnown RBP16.46■□□□□ 0.23
CCDC144A-203ENST00000360495 KANK4Q5T7N3 995 aaPredicted RBP16.46■□□□□ 0.22
CCDC144A-203ENST00000360495 NASPP49321 788 aaPredicted RBP16.45■□□□□ 0.22
CCDC144A-203ENST00000360495 CCDC39Q9UFE4 941 aa16.45■□□□□ 0.22
CCDC144A-203ENST00000360495 CGNL1Q0VF96 1302 aa16.45■□□□□ 0.22
CCDC144A-203ENST00000360495 RILPL2Q969X0 211 aa16.44■□□□□ 0.22
CCDC144A-203ENST00000360495 MNS1Q8NEH6 495 aa16.44■□□□□ 0.22
CCDC144A-203ENST00000360495 KIF15Q9NS87 1388 aa16.44■□□□□ 0.22
CCDC144A-203ENST00000360495 HDAC5Q9UQL6 1122 aa16.44■□□□□ 0.22
CCDC144A-203ENST00000360495 COG6Q9Y2V7 657 aa16.43■□□□□ 0.22
CCDC144A-203ENST00000360495 BCL2L13Q9BXK5 485 aa16.43■□□□□ 0.22
CCDC144A-203ENST00000360495 SPAG9O60271 1321 aaKnown RBP16.43■□□□□ 0.22
CCDC144A-203ENST00000360495 KANK1Q14678 1352 aa16.43■□□□□ 0.22
CCDC144A-203ENST00000360495 MCTP1Q6DN14 999 aa16.43■□□□□ 0.22
CCDC144A-203ENST00000360495 CWC15Q9P013 229 aaKnown RBP16.43■□□□□ 0.22
CCDC144A-203ENST00000360495 L3MBTL2Q969R5 705 aa16.42■□□□□ 0.22
CCDC144A-203ENST00000360495 CHMP3Q9Y3E7 222 aa16.42■□□□□ 0.22
CCDC144A-203ENST00000360495 RBM10P98175 930 aaKnown RBP16.42■□□□□ 0.22
CCDC144A-203ENST00000360495 ACBD3Q9H3P7 528 aa16.42■□□□□ 0.22
CCDC144A-203ENST00000360495 PRKRIP1Q9H875 184 aaPredicted RBP16.42■□□□□ 0.22
CCDC144A-203ENST00000360495 CHMP4AQ9BY43 222 aa16.41■□□□□ 0.22
CCDC144A-203ENST00000360495 NUCB2P80303 420 aa16.41■□□□□ 0.22
CCDC144A-203ENST00000360495 HSP90B2PQ58FF3 399 aa16.41■□□□□ 0.22
CCDC144A-203ENST00000360495 ZKSCAN2Q63HK3 967 aa16.41■□□□□ 0.22
CCDC144A-203ENST00000360495 IPO7O95373 1038 aaKnown RBP16.4■□□□□ 0.22
CCDC144A-203ENST00000360495 REC8O95072 547 aa16.4■□□□□ 0.22
CCDC144A-203ENST00000360495 BCL11BQ9C0K0 894 aaPredicted RBP16.4■□□□□ 0.22
CCDC144A-203ENST00000360495 STK26Q9P289 416 aa16.39■□□□□ 0.21
CCDC144A-203ENST00000360495 RRP7AQ9Y3A4 280 aaKnown RBP16.39■□□□□ 0.21
CCDC144A-203ENST00000360495 BICD2Q8TD16 824 aa16.39■□□□□ 0.21
CCDC144A-203ENST00000360495 PRM3Q9NNZ6 103 aa16.39■□□□□ 0.21
CCDC144A-203ENST00000360495 E9PSI1 815 aa16.39■□□□□ 0.21
CCDC144A-203ENST00000360495 AK7Q96M32 723 aa16.39■□□□□ 0.21
CCDC144A-203ENST00000360495 RRP12Q5JTH9 1297 aaKnown RBP16.38■□□□□ 0.21
CCDC144A-203ENST00000360495 RUFY1Q96T51 708 aa16.38■□□□□ 0.21
CCDC144A-203ENST00000360495 CHMP4CQ96CF2 233 aa16.38■□□□□ 0.21
CCDC144A-203ENST00000360495 TOMM22Q9NS69 142 aa16.38■□□□□ 0.21
CCDC144A-203ENST00000360495 TRAK2O60296 914 aa16.37■□□□□ 0.21
CCDC144A-203ENST00000360495 SASS6Q6UVJ0 657 aa16.37■□□□□ 0.21
CCDC144A-203ENST00000360495 SOGA1O94964 1423 aa16.37■□□□□ 0.21
CCDC144A-203ENST00000360495 H0YHG0 523 aa16.36■□□□□ 0.21
CCDC144A-203ENST00000360495 LMOD3Q0VAK6 560 aa16.36■□□□□ 0.21
CCDC144A-203ENST00000360495 EIF3AQ14152 1382 aaKnown RBP16.36■□□□□ 0.21
CCDC144A-203ENST00000360495 C22orf23Q9BZE7 217 aa16.35■□□□□ 0.21
CCDC144A-203ENST00000360495 RNF214Q8ND24 703 aa16.35■□□□□ 0.21
CCDC144A-203ENST00000360495 ZNF330Q9Y3S2 320 aaPredicted RBP16.35■□□□□ 0.21
CCDC144A-203ENST00000360495 FMN1Q68DA7 1419 aa16.35■□□□□ 0.21
CCDC144A-203ENST00000360495 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.35■□□□□ 0.21
CCDC144A-203ENST00000360495 TAF7LQ5H9L4 462 aa16.35■□□□□ 0.21
CCDC144A-203ENST00000360495 FRAT2O75474 233 aaPredicted RBP16.35■□□□□ 0.21
CCDC144A-203ENST00000360495 HMGN5P82970 282 aaKnown RBP16.34■□□□□ 0.21
CCDC144A-203ENST00000360495 RDXP35241 583 aaKnown RBP16.34■□□□□ 0.21
CCDC144A-203ENST00000360495 CDR1P51861 262 aa16.34■□□□□ 0.21
CCDC144A-203ENST00000360495 RRP9O43818 475 aaKnown RBP16.33■□□□□ 0.21
CCDC144A-203ENST00000360495 PCMTD1Q96MG8 357 aaPredicted RBP16.33■□□□□ 0.21
CCDC144A-203ENST00000360495 CCDC173Q0VFZ6 552 aa16.33■□□□□ 0.2
CCDC144A-203ENST00000360495 ANKRD20A12PQ8NF67 263 aa16.33■□□□□ 0.2
CCDC144A-203ENST00000360495 VPS37CA5D8V6 355 aaPredicted RBP16.32■□□□□ 0.2
CCDC144A-203ENST00000360495 MARCH6O60337 910 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms