RNA–Protein interactions for RNA: ENST00000360392.4

TRIM9-203, Transcript of tripartite motif containing 9, humanhuman

TSL 1 (best) BASIC

Gene TRIM9, Length 3,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-203ENST00000360392 AKNAQ7Z591 1439 aa12.91□□□□□ -0.34
TRIM9-203ENST00000360392 HSP90AA1P07900 732 aaKnown RBP12.91□□□□□ -0.34
TRIM9-203ENST00000360392 NCOA1Q15788 1441 aa12.9□□□□□ -0.34
TRIM9-203ENST00000360392 DNMT1P26358 1616 aaKnown RBP12.9□□□□□ -0.34
TRIM9-203ENST00000360392 ANKRD50Q9ULJ7 1429 aa12.89□□□□□ -0.35
TRIM9-203ENST00000360392 ROCK1Q13464 1354 aa12.89□□□□□ -0.35
TRIM9-203ENST00000360392 ST20-MTHFSA0A0A6YYL1 179 aa12.89□□□□□ -0.35
TRIM9-203ENST00000360392 NUP160Q12769 1436 aa12.89□□□□□ -0.35
TRIM9-203ENST00000360392 NUDCQ9Y266 331 aa12.89□□□□□ -0.35
TRIM9-203ENST00000360392 ATP10BO94823 1461 aa12.89□□□□□ -0.35
TRIM9-203ENST00000360392 CCDC7Q96M83 1385 aa12.88□□□□□ -0.35
TRIM9-203ENST00000360392 CNTLNQ9NXG0 1405 aa12.88□□□□□ -0.35
TRIM9-203ENST00000360392 RPRD2Q5VT52 1461 aaKnown RBP12.86□□□□□ -0.35
TRIM9-203ENST00000360392 KIF15Q9NS87 1388 aa12.86□□□□□ -0.35
TRIM9-203ENST00000360392 PZPP20742 1482 aa12.86□□□□□ -0.35
TRIM9-203ENST00000360392 PNNQ9H307 717 aaKnown RBP12.85□□□□□ -0.35
TRIM9-203ENST00000360392 USP47Q96K76 1375 aa12.85□□□□□ -0.35
TRIM9-203ENST00000360392 SLC4A3P48751 1232 aa12.85□□□□□ -0.35
TRIM9-203ENST00000360392 FRAT1Q92837 279 aaPredicted RBP12.84□□□□□ -0.35
TRIM9-203ENST00000360392 DDRGK1Q96HY6 314 aa12.84□□□□□ -0.35
TRIM9-203ENST00000360392 NBPF1Q3BBV0 1214 aa12.84□□□□□ -0.35
TRIM9-203ENST00000360392 C9orf84Q5VXU9 1444 aa12.84□□□□□ -0.35
TRIM9-203ENST00000360392 TEX14Q8IWB6 1497 aa12.83□□□□□ -0.36
TRIM9-203ENST00000360392 AFAP1Q8N556 730 aa12.82□□□□□ -0.36
TRIM9-203ENST00000360392 CC2D1BQ5T0F9 858 aaKnown RBP12.81□□□□□ -0.36
TRIM9-203ENST00000360392 EXOC6Q8TAG9 804 aa12.81□□□□□ -0.36
TRIM9-203ENST00000360392 KIAA1107Q9UPP5 1409 aa12.81□□□□□ -0.36
TRIM9-203ENST00000360392 CHGAP10645 457 aaKnown RBP12.79□□□□□ -0.36
TRIM9-203ENST00000360392 ROCK2O75116 1388 aaKnown RBP12.79□□□□□ -0.36
TRIM9-203ENST00000360392 PLIN1O60240 522 aa12.78□□□□□ -0.36
TRIM9-203ENST00000360392 RCAN3Q9UKA8 241 aa12.78□□□□□ -0.36
TRIM9-203ENST00000360392 ITSN2Q9NZM3 1697 aa12.78□□□□□ -0.36
TRIM9-203ENST00000360392 ABCA8O94911 1581 aa12.78□□□□□ -0.36
TRIM9-203ENST00000360392 NFKBIBQ15653 356 aa12.78□□□□□ -0.36
TRIM9-203ENST00000360392 ABCC10Q5T3U5 1492 aa12.78□□□□□ -0.36
TRIM9-203ENST00000360392 ERCC6L2Q5T890 1561 aa12.77□□□□□ -0.37
TRIM9-203ENST00000360392 CDC42BPAQ5VT25 1732 aa12.76□□□□□ -0.37
TRIM9-203ENST00000360392 FAM43AQ8N2R8 423 aa12.75□□□□□ -0.37
TRIM9-203ENST00000360392 PDE4AP27815 886 aa12.75□□□□□ -0.37
TRIM9-203ENST00000360392 RGS3P49796 1198 aa12.75□□□□□ -0.37
TRIM9-203ENST00000360392 ARID3AQ99856 593 aa12.74□□□□□ -0.37
TRIM9-203ENST00000360392 ARHGAP5Q13017 1502 aa12.74□□□□□ -0.37
TRIM9-203ENST00000360392 ADGRL2O95490 1459 aa12.73□□□□□ -0.37
TRIM9-203ENST00000360392 EFCAB2Q5VUJ9 269 aa12.73□□□□□ -0.37
TRIM9-203ENST00000360392 RRP1P56182 461 aaKnown RBP12.73□□□□□ -0.37
TRIM9-203ENST00000360392 SPATA31E1Q6ZUB1 1445 aa12.72□□□□□ -0.37
TRIM9-203ENST00000360392 CANXP27824 592 aaKnown RBP12.72□□□□□ -0.37
TRIM9-203ENST00000360392 SKAP1Q86WV1 359 aa12.72□□□□□ -0.37
TRIM9-203ENST00000360392 CCDC144AA2RUR9 1427 aa12.72□□□□□ -0.37
TRIM9-203ENST00000360392 ADGBQ8N7X0 1667 aa12.71□□□□□ -0.37
TRIM9-203ENST00000360392 KIF3BO15066 747 aa12.71□□□□□ -0.37
TRIM9-203ENST00000360392 ADCY10Q96PN6 1610 aa12.71□□□□□ -0.37
TRIM9-203ENST00000360392 CHD1O14646 1710 aa12.71□□□□□ -0.37
TRIM9-203ENST00000360392 TCERG1O14776 1098 aaKnown RBP12.71□□□□□ -0.37
TRIM9-203ENST00000360392 SYCP2Q9BX26 1530 aa12.71□□□□□ -0.38
TRIM9-203ENST00000360392 WDR43Q15061 677 aaKnown RBP eCLIP12.71□□□□□ -0.38
TRIM9-203ENST00000360392 MBD5Q9P267 1494 aa12.7□□□□□ -0.38
TRIM9-203ENST00000360392 TRIM44Q96DX7 344 aaPredicted RBP12.7□□□□□ -0.38
TRIM9-203ENST00000360392 CDCA7LQ96GN5 454 aa12.7□□□□□ -0.38
TRIM9-203ENST00000360392 SPAG9O60271 1321 aaKnown RBP12.69□□□□□ -0.38
TRIM9-203ENST00000360392 CCDC141Q6ZP82 1450 aa12.69□□□□□ -0.38
TRIM9-203ENST00000360392 CROCC2H7BZ55 1655 aa12.69□□□□□ -0.38
TRIM9-203ENST00000360392 NUTM2DQ5VT03 806 aaPredicted RBP12.69□□□□□ -0.38
TRIM9-203ENST00000360392 PLEKHH2Q8IVE3 1493 aa12.69□□□□□ -0.38
TRIM9-203ENST00000360392 SAMD9LQ8IVG5 1584 aa12.69□□□□□ -0.38
TRIM9-203ENST00000360392 PNISRQ8TF01 805 aaKnown RBP12.69□□□□□ -0.38
TRIM9-203ENST00000360392 GZF1Q9H116 711 aaPredicted RBP12.68□□□□□ -0.38
TRIM9-203ENST00000360392 AMER1Q5JTC6 1135 aaPredicted RBP12.67□□□□□ -0.38
TRIM9-203ENST00000360392 TTC37Q6PGP7 1564 aa12.67□□□□□ -0.38
TRIM9-203ENST00000360392 FRAT2O75474 233 aaPredicted RBP12.67□□□□□ -0.38
TRIM9-203ENST00000360392 L1TD1Q5T7N2 865 aaKnown RBP12.67□□□□□ -0.38
TRIM9-203ENST00000360392 GGT6Q6P531 493 aa12.67□□□□□ -0.38
TRIM9-203ENST00000360392 PANK3Q9H999 370 aa12.67□□□□□ -0.38
TRIM9-203ENST00000360392 SMG6Q86US8 1419 aaKnown RBP12.67□□□□□ -0.38
TRIM9-203ENST00000360392 MYBBP1AQ9BQG0 1328 aaKnown RBP12.66□□□□□ -0.38
TRIM9-203ENST00000360392 RALBP1Q15311 655 aa12.66□□□□□ -0.38
TRIM9-203ENST00000360392 CRBNQ96SW2 442 aa12.66□□□□□ -0.38
TRIM9-203ENST00000360392 BCORL1Q5H9F3 1711 aa12.66□□□□□ -0.38
TRIM9-203ENST00000360392 WASHC2CQ9Y4E1 1318 aa12.65□□□□□ -0.38
TRIM9-203ENST00000360392 RRP9O43818 475 aaKnown RBP12.65□□□□□ -0.38
TRIM9-203ENST00000360392 KTN1Q86UP2 1357 aaKnown RBP12.65□□□□□ -0.38
TRIM9-203ENST00000360392 RSPH4AQ5TD94 716 aa12.65□□□□□ -0.38
TRIM9-203ENST00000360392 NLRP13Q86W25 1043 aa12.65□□□□□ -0.38
TRIM9-203ENST00000360392 SHANK2Q9UPX8 1470 aa12.65□□□□□ -0.39
TRIM9-203ENST00000360392 DHX29Q7Z478 1369 aaKnown RBP12.64□□□□□ -0.39
TRIM9-203ENST00000360392 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.64□□□□□ -0.39
TRIM9-203ENST00000360392 CDC42BPBQ9Y5S2 1711 aa12.64□□□□□ -0.39
TRIM9-203ENST00000360392 NPM1P06748 294 aaKnown RBP eCLIP12.64□□□□□ -0.39
TRIM9-203ENST00000360392 TNNT2P45379 298 aaPredicted RBP12.64□□□□□ -0.39
TRIM9-203ENST00000360392 FAM135AQ9P2D6 1515 aa12.63□□□□□ -0.39
TRIM9-203ENST00000360392 SLKQ9H2G2 1235 aaPredicted RBP12.63□□□□□ -0.39
TRIM9-203ENST00000360392 RBM10P98175 930 aaKnown RBP12.62□□□□□ -0.39
TRIM9-203ENST00000360392 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.62□□□□□ -0.39
TRIM9-203ENST00000360392 PDE4CQ08493 712 aa12.62□□□□□ -0.39
TRIM9-203ENST00000360392 ARHGEF12Q9NZN5 1544 aa12.61□□□□□ -0.39
TRIM9-203ENST00000360392 KNSTRNQ9Y448 316 aa12.61□□□□□ -0.39
TRIM9-203ENST00000360392 TMF1P82094 1093 aa12.61□□□□□ -0.39
TRIM9-203ENST00000360392 SAFB2Q14151 953 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRIM9-203ENST00000360392 NEUROD2Q15784 382 aa12.6□□□□□ -0.39
TRIM9-203ENST00000360392 TRAPPC8Q9Y2L5 1435 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms