RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 RALBP1Q15311 655 aa27.78■■■□□ 2.04
TRIM3-202ENST00000359518 NPM2Q86SE8 214 aaKnown RBP27.78■■■□□ 2.04
TRIM3-202ENST00000359518 CC2D1BQ5T0F9 858 aaKnown RBP27.77■■■□□ 2.04
TRIM3-202ENST00000359518 RRP1P56182 461 aaKnown RBP27.76■■■□□ 2.03
TRIM3-202ENST00000359518 BRD4O60885 1362 aaPredicted RBP27.76■■■□□ 2.03
TRIM3-202ENST00000359518 CDCA7LQ96GN5 454 aa27.76■■■□□ 2.03
TRIM3-202ENST00000359518 ATP10BO94823 1461 aa27.75■■■□□ 2.03
TRIM3-202ENST00000359518 RCAN3Q9UKA8 241 aa27.75■■■□□ 2.03
TRIM3-202ENST00000359518 LRPPRCP42704 1394 aaKnown RBP27.75■■■□□ 2.03
TRIM3-202ENST00000359518 MAGI1Q96QZ7 1491 aaPredicted RBP27.75■■■□□ 2.03
TRIM3-202ENST00000359518 SYNJ2O15056 1496 aa27.74■■■□□ 2.03
TRIM3-202ENST00000359518 PRKCSHP14314 528 aaPredicted RBP27.73■■■□□ 2.03
TRIM3-202ENST00000359518 IPO9Q96P70 1041 aaKnown RBP27.72■■■□□ 2.03
TRIM3-202ENST00000359518 CDC42BPAQ5VT25 1732 aa27.72■■■□□ 2.03
TRIM3-202ENST00000359518 ADCY10Q96PN6 1610 aa27.71■■■□□ 2.03
TRIM3-202ENST00000359518 NLRP13Q86W25 1043 aa27.7■■■□□ 2.03
TRIM3-202ENST00000359518 ABCC10Q5T3U5 1492 aa27.7■■■□□ 2.02
TRIM3-202ENST00000359518 ZBTB47Q9UFB7 747 aaPredicted RBP27.7■■■□□ 2.02
TRIM3-202ENST00000359518 PLIN1O60240 522 aa27.69■■■□□ 2.02
TRIM3-202ENST00000359518 KTN1Q86UP2 1357 aaKnown RBP27.68■■■□□ 2.02
TRIM3-202ENST00000359518 ARHGEF12Q9NZN5 1544 aa27.67■■■□□ 2.02
TRIM3-202ENST00000359518 CCDC144AA2RUR9 1427 aa27.64■■■□□ 2.02
TRIM3-202ENST00000359518 SKAP1Q86WV1 359 aa27.64■■■□□ 2.02
TRIM3-202ENST00000359518 SHANK2Q9UPX8 1470 aa27.63■■■□□ 2.01
TRIM3-202ENST00000359518 PER1O15534 1290 aaPredicted RBP27.62■■■□□ 2.01
TRIM3-202ENST00000359518 PANK3Q9H999 370 aa27.62■■■□□ 2.01
TRIM3-202ENST00000359518 NUP160Q12769 1436 aa27.6■■■□□ 2.01
TRIM3-202ENST00000359518 PRAG1Q86YV5 1406 aa27.59■■■□□ 2.01
TRIM3-202ENST00000359518 MYT1LQ9UL68 1186 aa27.59■■■□□ 2.01
TRIM3-202ENST00000359518 PARD3Q8TEW0 1356 aa27.59■■■□□ 2.01
TRIM3-202ENST00000359518 ABCA8O94911 1581 aa27.58■■■□□ 2.01
TRIM3-202ENST00000359518 PTPRGP23470 1445 aa27.58■■■□□ 2.01
TRIM3-202ENST00000359518 FAM135AQ9P2D6 1515 aa27.58■■■□□ 2.01
TRIM3-202ENST00000359518 DISP3Q9P2K9 1392 aa27.58■■■□□ 2.01
TRIM3-202ENST00000359518 KDM5DQ9BY66 1539 aa27.55■■■□□ 2
TRIM3-202ENST00000359518 PDE4AP27815 886 aa27.54■■■□□ 2
TRIM3-202ENST00000359518 TESK2Q96S53 571 aa27.54■■■□□ 2
TRIM3-202ENST00000359518 RTL5Q5HYW3 569 aaPredicted RBP27.53■■■□□ 2
TRIM3-202ENST00000359518 CCDC141Q6ZP82 1450 aa27.53■■■□□ 2
TRIM3-202ENST00000359518 PDE3BQ13370 1112 aa27.51■■□□□ 1.99
TRIM3-202ENST00000359518 TCERG1O14776 1098 aaKnown RBP27.5■■□□□ 1.99
TRIM3-202ENST00000359518 LAS1LQ9Y4W2 734 aaKnown RBP27.5■■□□□ 1.99
TRIM3-202ENST00000359518 PLA2R1Q13018 1463 aa27.5■■□□□ 1.99
TRIM3-202ENST00000359518 CRBNQ96SW2 442 aa27.49■■□□□ 1.99
TRIM3-202ENST00000359518 E9PCH4 1651 aa27.48■■□□□ 1.99
TRIM3-202ENST00000359518 A2MP01023 1474 aa27.48■■□□□ 1.99
TRIM3-202ENST00000359518 SAMD9LQ8IVG5 1584 aa27.48■■□□□ 1.99
TRIM3-202ENST00000359518 TMF1P82094 1093 aa27.46■■□□□ 1.99
TRIM3-202ENST00000359518 ADAMTS8Q9UP79 889 aa27.45■■□□□ 1.99
TRIM3-202ENST00000359518 C20orf194Q5TEA3 1177 aa27.45■■□□□ 1.98
TRIM3-202ENST00000359518 TRPM1Q7Z4N2 1603 aa27.45■■□□□ 1.98
TRIM3-202ENST00000359518 SYCP2Q9BX26 1530 aa27.44■■□□□ 1.98
TRIM3-202ENST00000359518 BACH2Q9BYV9 841 aa27.43■■□□□ 1.98
TRIM3-202ENST00000359518 PLEKHH2Q8IVE3 1493 aa27.43■■□□□ 1.98
TRIM3-202ENST00000359518 ARHGEF5Q12774 1597 aa27.43■■□□□ 1.98
TRIM3-202ENST00000359518 RSPH4AQ5TD94 716 aa27.43■■□□□ 1.98
TRIM3-202ENST00000359518 ERBINQ96RT1 1412 aa27.42■■□□□ 1.98
TRIM3-202ENST00000359518 COL17A1Q9UMD9 1497 aaPredicted RBP27.41■■□□□ 1.98
TRIM3-202ENST00000359518 CDC42BPBQ9Y5S2 1711 aa27.4■■□□□ 1.98
TRIM3-202ENST00000359518 ARHGAP5Q13017 1502 aa27.4■■□□□ 1.98
TRIM3-202ENST00000359518 GPRASP1Q5JY77 1395 aa27.38■■□□□ 1.97
TRIM3-202ENST00000359518 KNSTRNQ9Y448 316 aa27.35■■□□□ 1.97
TRIM3-202ENST00000359518 WASHC2CQ9Y4E1 1318 aa27.34■■□□□ 1.97
TRIM3-202ENST00000359518 WDR43Q15061 677 aaKnown RBP eCLIP27.33■■□□□ 1.97
TRIM3-202ENST00000359518 NEFMP07197 916 aa27.32■■□□□ 1.96
TRIM3-202ENST00000359518 MS4A1P11836 297 aa27.31■■□□□ 1.96
TRIM3-202ENST00000359518 PREX2Q70Z35 1606 aa27.31■■□□□ 1.96
TRIM3-202ENST00000359518 BLMP54132 1417 aaPredicted RBP27.3■■□□□ 1.96
TRIM3-202ENST00000359518 PPP2R1AP30153 589 aa27.3■■□□□ 1.96
TRIM3-202ENST00000359518 TTC37Q6PGP7 1564 aa27.29■■□□□ 1.96
TRIM3-202ENST00000359518 PRDM15P57071 1507 aaPredicted RBP27.29■■□□□ 1.96
TRIM3-202ENST00000359518 CCDC146Q8IYE0 955 aa27.29■■□□□ 1.96
TRIM3-202ENST00000359518 SLC4A3P48751 1232 aa27.27■■□□□ 1.96
TRIM3-202ENST00000359518 PLEKHH1Q9ULM0 1364 aa27.27■■□□□ 1.96
TRIM3-202ENST00000359518 MAGI2Q86UL8 1455 aa27.25■■□□□ 1.95
TRIM3-202ENST00000359518 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.23■■□□□ 1.95
TRIM3-202ENST00000359518 DUSP27Q5VZP5 1158 aa27.23■■□□□ 1.95
TRIM3-202ENST00000359518 MYO5CQ9NQX4 1742 aa27.22■■□□□ 1.95
TRIM3-202ENST00000359518 AMER1Q5JTC6 1135 aaPredicted RBP27.21■■□□□ 1.95
TRIM3-202ENST00000359518 UNC13BO14795 1591 aa27.21■■□□□ 1.95
TRIM3-202ENST00000359518 ZMYM4Q5VZL5 1548 aa27.19■■□□□ 1.94
TRIM3-202ENST00000359518 GOLGA2Q08379 1002 aa27.19■■□□□ 1.94
TRIM3-202ENST00000359518 AFAP1Q8N556 730 aa27.18■■□□□ 1.94
TRIM3-202ENST00000359518 RGS3P49796 1198 aa27.18■■□□□ 1.94
TRIM3-202ENST00000359518 WDR7Q9Y4E6 1490 aa27.18■■□□□ 1.94
TRIM3-202ENST00000359518 EFCAB2Q5VUJ9 269 aa27.15■■□□□ 1.94
TRIM3-202ENST00000359518 SPINK5Q9NQ38 1064 aaPredicted RBP27.15■■□□□ 1.94
TRIM3-202ENST00000359518 IQGAP3Q86VI3 1631 aa27.15■■□□□ 1.94
TRIM3-202ENST00000359518 APAF1O14727 1248 aa27.14■■□□□ 1.94
TRIM3-202ENST00000359518 EIF2AK4Q9P2K8 1649 aaKnown RBP27.13■■□□□ 1.93
TRIM3-202ENST00000359518 KDM2BQ8NHM5 1336 aa27.12■■□□□ 1.93
TRIM3-202ENST00000359518 DUOX2Q9NRD8 1548 aa27.12■■□□□ 1.93
TRIM3-202ENST00000359518 TRAPPC8Q9Y2L5 1435 aa27.12■■□□□ 1.93
TRIM3-202ENST00000359518 IL27Q8NEV9 243 aa27.11■■□□□ 1.93
TRIM3-202ENST00000359518 RTN4Q9NQC3 1192 aaKnown RBP27.11■■□□□ 1.93
TRIM3-202ENST00000359518 ERCC6L2Q5T890 1561 aa27.11■■□□□ 1.93
TRIM3-202ENST00000359518 MAST1Q9Y2H9 1570 aa27.1■■□□□ 1.93
TRIM3-202ENST00000359518 LAMC1P11047 1609 aa27.1■■□□□ 1.93
TRIM3-202ENST00000359518 BCAR3O75815 825 aa27.1■■□□□ 1.93
TRIM3-202ENST00000359518 CENPQQ7L2Z9 268 aaPredicted RBP27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms