RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 RAD54L2Q9Y4B4 1467 aa14.24□□□□□ -0.13
TMC3-201ENST00000359440 HDGFL2Q7Z4V5 671 aaPredicted RBP14.23□□□□□ -0.13
TMC3-201ENST00000359440 ANKRD50Q9ULJ7 1429 aa14.23□□□□□ -0.13
TMC3-201ENST00000359440 JPH4Q96JJ6 628 aa14.23□□□□□ -0.13
TMC3-201ENST00000359440 ITPRIPQ8IWB1 547 aa14.22□□□□□ -0.13
TMC3-201ENST00000359440 SKOR2Q2VWA4 1001 aaPredicted RBP14.22□□□□□ -0.13
TMC3-201ENST00000359440 SUPT6HQ7KZ85 1726 aaKnown RBP14.22□□□□□ -0.13
TMC3-201ENST00000359440 NAIPQ13075 1403 aa14.22□□□□□ -0.13
TMC3-201ENST00000359440 SRPK2P78362 688 aaKnown RBP14.21□□□□□ -0.13
TMC3-201ENST00000359440 SMC4Q9NTJ3 1288 aa14.21□□□□□ -0.13
TMC3-201ENST00000359440 CHAF1AQ13111 956 aaPredicted RBP14.21□□□□□ -0.13
TMC3-201ENST00000359440 SYAP1Q96A49 352 aaPredicted RBP14.2□□□□□ -0.14
TMC3-201ENST00000359440 ZRSR1Q15695 479 aaKnown RBP14.2□□□□□ -0.14
TMC3-201ENST00000359440 KIAA1107Q9UPP5 1409 aa14.2□□□□□ -0.14
TMC3-201ENST00000359440 ROCK1Q13464 1354 aa14.19□□□□□ -0.14
TMC3-201ENST00000359440 PLIN1O60240 522 aa14.19□□□□□ -0.14
TMC3-201ENST00000359440 SPAG9O60271 1321 aaKnown RBP14.19□□□□□ -0.14
TMC3-201ENST00000359440 MFAP1P55081 439 aaKnown RBP14.19□□□□□ -0.14
TMC3-201ENST00000359440 PNISRQ8TF01 805 aaKnown RBP14.18□□□□□ -0.14
TMC3-201ENST00000359440 SPRYD3Q8NCJ5 442 aa14.18□□□□□ -0.14
TMC3-201ENST00000359440 TERF2IPQ9NYB0 399 aa14.18□□□□□ -0.14
TMC3-201ENST00000359440 HECW1Q76N89 1606 aa14.18□□□□□ -0.14
TMC3-201ENST00000359440 CCDC146Q8IYE0 955 aa14.18□□□□□ -0.14
TMC3-201ENST00000359440 BIVM-ERCC5R4GMW8 1640 aa14.17□□□□□ -0.14
TMC3-201ENST00000359440 GOLGA6L6A8MZA4 724 aa14.17□□□□□ -0.14
TMC3-201ENST00000359440 ZKSCAN2Q63HK3 967 aa14.17□□□□□ -0.14
TMC3-201ENST00000359440 NRDCO43847 1150 aa14.17□□□□□ -0.14
TMC3-201ENST00000359440 LMOD3Q0VAK6 560 aa14.16□□□□□ -0.14
TMC3-201ENST00000359440 GZF1Q9H116 711 aaPredicted RBP14.16□□□□□ -0.14
TMC3-201ENST00000359440 HDGFP51858 240 aaKnown RBP14.16□□□□□ -0.14
TMC3-201ENST00000359440 CHMP4AQ9BY43 222 aa14.16□□□□□ -0.14
TMC3-201ENST00000359440 NFKBIBQ15653 356 aa14.15□□□□□ -0.14
TMC3-201ENST00000359440 BACH2Q9BYV9 841 aa14.15□□□□□ -0.14
TMC3-201ENST00000359440 CHMP5Q9NZZ3 219 aa14.15□□□□□ -0.14
TMC3-201ENST00000359440 KIAA2012Q0VF49 1180 aa14.14□□□□□ -0.15
TMC3-201ENST00000359440 PCF11O94913 1555 aaKnown RBP14.14□□□□□ -0.15
TMC3-201ENST00000359440 NINLQ9Y2I6 1382 aa14.14□□□□□ -0.15
TMC3-201ENST00000359440 HMMRO75330 724 aa14.13□□□□□ -0.15
TMC3-201ENST00000359440 APAF1O14727 1248 aa14.13□□□□□ -0.15
TMC3-201ENST00000359440 NBPF8Q3BBV2 869 aa14.13□□□□□ -0.15
TMC3-201ENST00000359440 AKNAQ7Z591 1439 aa14.13□□□□□ -0.15
TMC3-201ENST00000359440 DDX19BQ9UMR2 479 aa14.13□□□□□ -0.15
TMC3-201ENST00000359440 KIF3BO15066 747 aa14.12□□□□□ -0.15
TMC3-201ENST00000359440 CLUAP1Q96AJ1 413 aa14.12□□□□□ -0.15
TMC3-201ENST00000359440 DNMBPQ6XZF7 1577 aa14.12□□□□□ -0.15
TMC3-201ENST00000359440 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.11□□□□□ -0.15
TMC3-201ENST00000359440 PTPRGP23470 1445 aa14.11□□□□□ -0.15
TMC3-201ENST00000359440 GOLGA6L4A6NEF3 574 aa14.11□□□□□ -0.15
TMC3-201ENST00000359440 CUL7Q14999 1698 aa14.11□□□□□ -0.15
TMC3-201ENST00000359440 GRIN2BQ13224 1484 aa14.11□□□□□ -0.15
TMC3-201ENST00000359440 ST18O60284 1047 aa14.11□□□□□ -0.15
TMC3-201ENST00000359440 ABCA10Q8WWZ4 1543 aa14.11□□□□□ -0.15
TMC3-201ENST00000359440 ZNF644Q9H582 1327 aaPredicted RBP14.11□□□□□ -0.15
TMC3-201ENST00000359440 TOPBP1Q92547 1522 aa14.11□□□□□ -0.15
TMC3-201ENST00000359440 DAPK1P53355 1430 aa14.1□□□□□ -0.15
TMC3-201ENST00000359440 NCOA1Q15788 1441 aa14.1□□□□□ -0.15
TMC3-201ENST00000359440 SLC4A3P48751 1232 aa14.1□□□□□ -0.15
TMC3-201ENST00000359440 COG6Q9Y2V7 657 aa14.1□□□□□ -0.15
TMC3-201ENST00000359440 PDE3AQ14432 1141 aa14.1□□□□□ -0.15
TMC3-201ENST00000359440 SCAPERQ9BY12 1400 aa14.1□□□□□ -0.15
TMC3-201ENST00000359440 PHF14O94880 888 aa14.1□□□□□ -0.15
TMC3-201ENST00000359440 POLA1P09884 1462 aaPredicted RBP14.09□□□□□ -0.15
TMC3-201ENST00000359440 RUNDC1Q96C34 613 aa14.09□□□□□ -0.15
TMC3-201ENST00000359440 PLCB2Q00722 1185 aa14.09□□□□□ -0.15
TMC3-201ENST00000359440 TROQ12816 1431 aaPredicted RBP14.08□□□□□ -0.15
TMC3-201ENST00000359440 CSPP1Q1MSJ5 1256 aa14.08□□□□□ -0.16
TMC3-201ENST00000359440 MAPKBP1O60336 1514 aa14.08□□□□□ -0.16
TMC3-201ENST00000359440 KCNJ4P48050 445 aa14.08□□□□□ -0.16
TMC3-201ENST00000359440 HSP90AA2PQ14568 343 aaPredicted RBP14.08□□□□□ -0.16
TMC3-201ENST00000359440 RTF1Q92541 710 aaKnown RBP14.08□□□□□ -0.16
TMC3-201ENST00000359440 PLEKHH2Q8IVE3 1493 aa14.08□□□□□ -0.16
TMC3-201ENST00000359440 PAK3O75914 559 aaPredicted RBP14.08□□□□□ -0.16
TMC3-201ENST00000359440 OS9Q13438 667 aaPredicted RBP14.08□□□□□ -0.16
TMC3-201ENST00000359440 ANKRD30BQ9BXX2 1392 aa14.07□□□□□ -0.16
TMC3-201ENST00000359440 KIAA1211Q6ZU35 1233 aa14.07□□□□□ -0.16
TMC3-201ENST00000359440 DZIP1LQ8IYY4 767 aaKnown RBP14.07□□□□□ -0.16
TMC3-201ENST00000359440 EVC2Q86UK5 1308 aa14.07□□□□□ -0.16
TMC3-201ENST00000359440 GGT6Q6P531 493 aa14.06□□□□□ -0.16
TMC3-201ENST00000359440 ISY1Q9ULR0 285 aaKnown RBP14.06□□□□□ -0.16
TMC3-201ENST00000359440 HDAC5Q9UQL6 1122 aa14.06□□□□□ -0.16
TMC3-201ENST00000359440 PTPN23Q9H3S7 1636 aa14.06□□□□□ -0.16
TMC3-201ENST00000359440 PRDM2Q13029 1718 aa14.06□□□□□ -0.16
TMC3-201ENST00000359440 HTATSF1O43719 755 aaKnown RBP14.06□□□□□ -0.16
TMC3-201ENST00000359440 CC2D2AQ9P2K1 1620 aa14.06□□□□□ -0.16
TMC3-201ENST00000359440 KIF16BQ96L93 1317 aa14.05□□□□□ -0.16
TMC3-201ENST00000359440 MSH5O43196 834 aa14.05□□□□□ -0.16
TMC3-201ENST00000359440 ADAMTS8Q9UP79 889 aa14.05□□□□□ -0.16
TMC3-201ENST00000359440 BICRAQ9NZM4 1560 aa14.05□□□□□ -0.16
TMC3-201ENST00000359440 CCDC184Q52MB2 194 aa14.04□□□□□ -0.16
TMC3-201ENST00000359440 MRE11P49959 708 aa14.04□□□□□ -0.16
TMC3-201ENST00000359440 EPRSP07814 1512 aaKnown RBP14.04□□□□□ -0.16
TMC3-201ENST00000359440 DDX49Q9Y6V7 483 aaKnown RBP14.03□□□□□ -0.16
TMC3-201ENST00000359440 C9orf84Q5VXU9 1444 aa14.03□□□□□ -0.16
TMC3-201ENST00000359440 RPRD2Q5VT52 1461 aaKnown RBP14.03□□□□□ -0.16
TMC3-201ENST00000359440 VGFO15240 615 aaPredicted RBP14.03□□□□□ -0.16
TMC3-201ENST00000359440 PPP2R1AP30153 589 aa14.03□□□□□ -0.16
TMC3-201ENST00000359440 FGD1P98174 961 aa14.02□□□□□ -0.16
TMC3-201ENST00000359440 SAFB2Q14151 953 aaKnown RBP eCLIP14.02□□□□□ -0.16
TMC3-201ENST00000359440 FAM43AQ8N2R8 423 aa14.02□□□□□ -0.16
TMC3-201ENST00000359440 CDCA7LQ96GN5 454 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms