RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 TSPY4P0CV99 314 aa20.48■□□□□ 0.87
PDLIM5-203ENST00000359265 TSPY10P0CW01 314 aa20.48■□□□□ 0.87
PDLIM5-203ENST00000359265 PLXNC1O60486 1568 aa20.47■□□□□ 0.87
PDLIM5-203ENST00000359265 NCOA1Q15788 1441 aa20.47■□□□□ 0.87
PDLIM5-203ENST00000359265 IQSEC2Q5JU85 1478 aa20.47■□□□□ 0.87
PDLIM5-203ENST00000359265 ZNF518AQ6AHZ1 1483 aa20.46■□□□□ 0.87
PDLIM5-203ENST00000359265 ZFYVE16Q7Z3T8 1539 aa20.45■□□□□ 0.86
PDLIM5-203ENST00000359265 ACIN1Q9UKV3 1341 aaKnown RBP20.45■□□□□ 0.86
PDLIM5-203ENST00000359265 CLSPNQ9HAW4 1339 aa20.44■□□□□ 0.86
PDLIM5-203ENST00000359265 TRAPPC8Q9Y2L5 1435 aa20.44■□□□□ 0.86
PDLIM5-203ENST00000359265 ZMYM4Q5VZL5 1548 aa20.43■□□□□ 0.86
PDLIM5-203ENST00000359265 UHRF1BP1Q6BDS2 1440 aa20.42■□□□□ 0.86
PDLIM5-203ENST00000359265 KDM5CP41229 1560 aa20.42■□□□□ 0.86
PDLIM5-203ENST00000359265 SETD1BQ9UPS6 1966 aaKnown RBP20.41■□□□□ 0.86
PDLIM5-203ENST00000359265 UBAP1LF5GYI3 381 aa20.41■□□□□ 0.86
PDLIM5-203ENST00000359265 RTEL1-TNFRSF6BF6WH68 1400 aa20.4■□□□□ 0.86
PDLIM5-203ENST00000359265 INO80Q9ULG1 1556 aaPredicted RBP20.4■□□□□ 0.86
PDLIM5-203ENST00000359265 ATP7AQ04656 1500 aa20.38■□□□□ 0.85
PDLIM5-203ENST00000359265 SPAG9O60271 1321 aaKnown RBP20.38■□□□□ 0.85
PDLIM5-203ENST00000359265 MED1Q15648 1581 aaPredicted RBP20.38■□□□□ 0.85
PDLIM5-203ENST00000359265 KIF15Q9NS87 1388 aa20.37■□□□□ 0.85
PDLIM5-203ENST00000359265 ANKRD50Q9ULJ7 1429 aa20.36■□□□□ 0.85
PDLIM5-203ENST00000359265 AFAP1Q8N556 730 aa20.36■□□□□ 0.85
PDLIM5-203ENST00000359265 MAGI2Q86UL8 1455 aa20.36■□□□□ 0.85
PDLIM5-203ENST00000359265 KIDINS220Q9ULH0 1771 aa20.34■□□□□ 0.85
PDLIM5-203ENST00000359265 DUOX2Q9NRD8 1548 aa20.34■□□□□ 0.85
PDLIM5-203ENST00000359265 MLH3Q9UHC1 1453 aa20.33■□□□□ 0.85
PDLIM5-203ENST00000359265 ATP10AO60312 1499 aa20.31■□□□□ 0.84
PDLIM5-203ENST00000359265 ZNF335Q9H4Z2 1342 aaPredicted RBP20.31■□□□□ 0.84
PDLIM5-203ENST00000359265 HSPA1LP34931 641 aa20.31■□□□□ 0.84
PDLIM5-203ENST00000359265 MYT1LQ9UL68 1186 aa20.31■□□□□ 0.84
PDLIM5-203ENST00000359265 UNC13BO14795 1591 aa20.3■□□□□ 0.84
PDLIM5-203ENST00000359265 TRIM52Q96A61 297 aa20.29■□□□□ 0.84
PDLIM5-203ENST00000359265 ERBINQ96RT1 1412 aa20.28■□□□□ 0.84
PDLIM5-203ENST00000359265 KDM5DQ9BY66 1539 aa20.28■□□□□ 0.84
PDLIM5-203ENST00000359265 EIF2AK4Q9P2K8 1649 aaKnown RBP20.26■□□□□ 0.83
PDLIM5-203ENST00000359265 ABCA6Q8N139 1617 aa20.25■□□□□ 0.83
PDLIM5-203ENST00000359265 C3P01024 1663 aa20.25■□□□□ 0.83
PDLIM5-203ENST00000359265 PIAS4Q8N2W9 510 aaPredicted RBP20.24■□□□□ 0.83
PDLIM5-203ENST00000359265 PZPP20742 1482 aa20.24■□□□□ 0.83
PDLIM5-203ENST00000359265 DIP2CQ9Y2E4 1556 aa20.23■□□□□ 0.83
PDLIM5-203ENST00000359265 NCKAP5LQ9HCH0 1330 aa20.23■□□□□ 0.83
PDLIM5-203ENST00000359265 IQGAP3Q86VI3 1631 aa20.21■□□□□ 0.83
PDLIM5-203ENST00000359265 DEPDC5O75140 1603 aa20.2■□□□□ 0.82
PDLIM5-203ENST00000359265 A2MP01023 1474 aa20.2■□□□□ 0.82
PDLIM5-203ENST00000359265 PIP4K2BP78356 416 aa20.19■□□□□ 0.82
PDLIM5-203ENST00000359265 MPHOSPH9Q99550 1183 aa20.19■□□□□ 0.82
PDLIM5-203ENST00000359265 DHX29Q7Z478 1369 aaKnown RBP20.19■□□□□ 0.82
PDLIM5-203ENST00000359265 CAMSAP1Q5T5Y3 1602 aa20.18■□□□□ 0.82
PDLIM5-203ENST00000359265 SCAF1Q9H7N4 1312 aaKnown RBP20.17■□□□□ 0.82
PDLIM5-203ENST00000359265 REREQ9P2R6 1566 aa20.17■□□□□ 0.82
PDLIM5-203ENST00000359265 NUP155O75694 1391 aa20.16■□□□□ 0.82
PDLIM5-203ENST00000359265 FAM135AQ9P2D6 1515 aa20.16■□□□□ 0.82
PDLIM5-203ENST00000359265 SLC4A1APQ9BWU0 796 aaKnown RBP20.15■□□□□ 0.82
PDLIM5-203ENST00000359265 PPP6R1Q9UPN7 881 aa20.14■□□□□ 0.81
PDLIM5-203ENST00000359265 RNF17Q9BXT8 1623 aaKnown RBP20.13■□□□□ 0.81
PDLIM5-203ENST00000359265 PRDM15P57071 1507 aaPredicted RBP20.1■□□□□ 0.81
PDLIM5-203ENST00000359265 RGS17Q9UGC6 210 aaPredicted RBP20.09■□□□□ 0.81
PDLIM5-203ENST00000359265 TET3O43151 1660 aa20.08■□□□□ 0.81
PDLIM5-203ENST00000359265 MROH1Q8NDA8 1641 aa20.08■□□□□ 0.8
PDLIM5-203ENST00000359265 KANK1Q14678 1352 aa20.08■□□□□ 0.8
PDLIM5-203ENST00000359265 AGLP35573 1532 aa20.07■□□□□ 0.8
PDLIM5-203ENST00000359265 KIF3BO15066 747 aa20.07■□□□□ 0.8
PDLIM5-203ENST00000359265 SIN3AQ96ST3 1273 aa20.07■□□□□ 0.8
PDLIM5-203ENST00000359265 VWDEQ8N2E2 1590 aa20.07■□□□□ 0.8
PDLIM5-203ENST00000359265 ANKRD30BQ9BXX2 1392 aa20.07■□□□□ 0.8
PDLIM5-203ENST00000359265 NEUROD1Q13562 356 aa20.06■□□□□ 0.8
PDLIM5-203ENST00000359265 TIMELESSQ9UNS1 1208 aa20.06■□□□□ 0.8
PDLIM5-203ENST00000359265 TOM1O60784 492 aa20.04■□□□□ 0.8
PDLIM5-203ENST00000359265 PKD2Q13563 968 aa20.04■□□□□ 0.8
PDLIM5-203ENST00000359265 TONSLQ96HA7 1378 aa20.04■□□□□ 0.8
PDLIM5-203ENST00000359265 CEP152O94986 1710 aa20.04■□□□□ 0.8
PDLIM5-203ENST00000359265 ADRA2BP18089 450 aa20.03■□□□□ 0.8
PDLIM5-203ENST00000359265 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.03■□□□□ 0.8
PDLIM5-203ENST00000359265 ESF1Q9H501 851 aaKnown RBP20.03■□□□□ 0.8
PDLIM5-203ENST00000359265 E9PCH4 1651 aa20.03■□□□□ 0.8
PDLIM5-203ENST00000359265 RPRD2Q5VT52 1461 aaKnown RBP20.02■□□□□ 0.8
PDLIM5-203ENST00000359265 ZC3H13Q5T200 1668 aaKnown RBP20.02■□□□□ 0.8
PDLIM5-203ENST00000359265 SPHKAPQ2M3C7 1700 aa19.99■□□□□ 0.79
PDLIM5-203ENST00000359265 ALKQ9UM73 1620 aa19.98■□□□□ 0.79
PDLIM5-203ENST00000359265 LMTK2Q8IWU2 1503 aa19.97■□□□□ 0.79
PDLIM5-203ENST00000359265 NPATQ14207 1427 aa19.97■□□□□ 0.79
PDLIM5-203ENST00000359265 PLA2R1Q13018 1463 aa19.97■□□□□ 0.79
PDLIM5-203ENST00000359265 GGT6Q6P531 493 aa19.96■□□□□ 0.79
PDLIM5-203ENST00000359265 EFCAB6Q5THR3 1501 aa19.96■□□□□ 0.79
PDLIM5-203ENST00000359265 ZMYM3Q14202 1370 aa19.95■□□□□ 0.79
PDLIM5-203ENST00000359265 CNTLNQ9NXG0 1405 aa19.94■□□□□ 0.78
PDLIM5-203ENST00000359265 ABCC3O15438 1527 aa19.93■□□□□ 0.78
PDLIM5-203ENST00000359265 WASHC2CQ9Y4E1 1318 aa19.91■□□□□ 0.78
PDLIM5-203ENST00000359265 POTEAQ6S8J7 498 aa19.9■□□□□ 0.78
PDLIM5-203ENST00000359265 TRPM2O94759 1503 aa19.9■□□□□ 0.78
PDLIM5-203ENST00000359265 ZNF142P52746 1687 aaPredicted RBP19.9■□□□□ 0.78
PDLIM5-203ENST00000359265 CCDC144AA2RUR9 1427 aa19.89■□□□□ 0.77
PDLIM5-203ENST00000359265 MROH2AA6NES4 1674 aa19.88■□□□□ 0.77
PDLIM5-203ENST00000359265 MYO3AQ8NEV4 1616 aa19.88■□□□□ 0.77
PDLIM5-203ENST00000359265 CEP170BQ9Y4F5 1589 aaPredicted RBP19.88■□□□□ 0.77
PDLIM5-203ENST00000359265 CPS1P31327 1500 aa19.88■□□□□ 0.77
PDLIM5-203ENST00000359265 CLTCQ00610 1675 aaKnown RBP19.87■□□□□ 0.77
PDLIM5-203ENST00000359265 PPP1R15AO75807 674 aaPredicted RBP19.87■□□□□ 0.77
PDLIM5-203ENST00000359265 CLTCL1P53675 1640 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms