RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 CCDC34Q96HJ3 373 aa16.25■□□□□ 0.19
NLRC3-202ENST00000359128 PMFBP1Q8TBY8 1022 aa16.24■□□□□ 0.19
NLRC3-202ENST00000359128 COG3Q96JB2 828 aa16.24■□□□□ 0.19
NLRC3-202ENST00000359128 NOP58Q9Y2X3 529 aaKnown RBP16.24■□□□□ 0.19
NLRC3-202ENST00000359128 RAPGEF2Q9Y4G8 1499 aa16.24■□□□□ 0.19
NLRC3-202ENST00000359128 DCAF8L1A6NGE4 600 aa16.24■□□□□ 0.19
NLRC3-202ENST00000359128 ERICH6BQ5W0A0 696 aa16.24■□□□□ 0.19
NLRC3-202ENST00000359128 KLHL34Q8N239 644 aa16.23■□□□□ 0.19
NLRC3-202ENST00000359128 CTDP1Q9Y5B0 961 aaPredicted RBP16.23■□□□□ 0.19
NLRC3-202ENST00000359128 CCDC146Q8IYE0 955 aa16.23■□□□□ 0.19
NLRC3-202ENST00000359128 NOL10Q9BSC4 688 aaKnown RBP16.23■□□□□ 0.19
NLRC3-202ENST00000359128 TTC5Q8N0Z6 440 aa16.23■□□□□ 0.19
NLRC3-202ENST00000359128 CADPSQ9ULU8 1353 aa16.23■□□□□ 0.19
NLRC3-202ENST00000359128 KANK4Q5T7N3 995 aaPredicted RBP16.22■□□□□ 0.19
NLRC3-202ENST00000359128 MROH2BQ7Z745 1585 aa16.22■□□□□ 0.19
NLRC3-202ENST00000359128 FHOD3Q2V2M9 1422 aa16.22■□□□□ 0.19
NLRC3-202ENST00000359128 SYTL4Q96C24 671 aaPredicted RBP16.21■□□□□ 0.19
NLRC3-202ENST00000359128 CCER2I3L3R5 266 aa16.21■□□□□ 0.19
NLRC3-202ENST00000359128 PTMSP20962 102 aa16.21■□□□□ 0.19
NLRC3-202ENST00000359128 MSNP26038 577 aaKnown RBP16.21■□□□□ 0.19
NLRC3-202ENST00000359128 PSME1Q06323 249 aa16.2■□□□□ 0.18
NLRC3-202ENST00000359128 AMOTL1Q8IY63 956 aa16.2■□□□□ 0.18
NLRC3-202ENST00000359128 RCAN3Q9UKA8 241 aa16.2■□□□□ 0.18
NLRC3-202ENST00000359128 VGFO15240 615 aaPredicted RBP16.2■□□□□ 0.18
NLRC3-202ENST00000359128 FBXW7Q969H0 707 aa16.2■□□□□ 0.18
NLRC3-202ENST00000359128 AMER1Q5JTC6 1135 aaPredicted RBP16.2■□□□□ 0.18
NLRC3-202ENST00000359128 PTPRGP23470 1445 aa16.19■□□□□ 0.18
NLRC3-202ENST00000359128 RAB3GAP2Q9H2M9 1393 aa16.18■□□□□ 0.18
NLRC3-202ENST00000359128 FAM69CQ0P6D2 419 aa16.18■□□□□ 0.18
NLRC3-202ENST00000359128 GBP4Q96PP9 640 aa16.18■□□□□ 0.18
NLRC3-202ENST00000359128 TCEAL9Q9UHQ7 104 aa16.18■□□□□ 0.18
NLRC3-202ENST00000359128 TOP2AP11388 1531 aaKnown RBP16.17■□□□□ 0.18
NLRC3-202ENST00000359128 CWC22Q9HCG8 908 aaKnown RBP16.17■□□□□ 0.18
NLRC3-202ENST00000359128 EVC2Q86UK5 1308 aa16.17■□□□□ 0.18
NLRC3-202ENST00000359128 ATF3P18847 181 aa16.17■□□□□ 0.18
NLRC3-202ENST00000359128 PDE4CQ08493 712 aa16.17■□□□□ 0.18
NLRC3-202ENST00000359128 CCDC144AA2RUR9 1427 aa16.17■□□□□ 0.18
NLRC3-202ENST00000359128 CREBRFQ8IUR6 639 aa16.17■□□□□ 0.18
NLRC3-202ENST00000359128 NGEFQ8N5V2 710 aa16.17■□□□□ 0.18
NLRC3-202ENST00000359128 RAD21O60216 631 aa16.16■□□□□ 0.18
NLRC3-202ENST00000359128 TEFQ10587 303 aa16.16■□□□□ 0.18
NLRC3-202ENST00000359128 CSPP1Q1MSJ5 1256 aa16.16■□□□□ 0.18
NLRC3-202ENST00000359128 SYAP1Q96A49 352 aaPredicted RBP16.15■□□□□ 0.18
NLRC3-202ENST00000359128 MFAP1P55081 439 aaKnown RBP16.14■□□□□ 0.17
NLRC3-202ENST00000359128 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.14■□□□□ 0.17
NLRC3-202ENST00000359128 KRI1Q8N9T8 703 aaKnown RBP16.14■□□□□ 0.17
NLRC3-202ENST00000359128 CENPJQ9HC77 1338 aaPredicted RBP16.14■□□□□ 0.17
NLRC3-202ENST00000359128 CEP89Q96ST8 783 aa16.13■□□□□ 0.17
NLRC3-202ENST00000359128 WIZO95785 1651 aa16.13■□□□□ 0.17
NLRC3-202ENST00000359128 NEXNQ0ZGT2 675 aa16.13■□□□□ 0.17
NLRC3-202ENST00000359128 MINK1Q8N4C8 1332 aaPredicted RBP16.13■□□□□ 0.17
NLRC3-202ENST00000359128 AKAP17AQ02040 695 aaKnown RBP16.12■□□□□ 0.17
NLRC3-202ENST00000359128 NOL8Q76FK4 1167 aaKnown RBP16.12■□□□□ 0.17
NLRC3-202ENST00000359128 VPS37DQ86XT2 251 aa16.12■□□□□ 0.17
NLRC3-202ENST00000359128 FANCD2Q9BXW9 1451 aa16.12■□□□□ 0.17
NLRC3-202ENST00000359128 CGNL1Q0VF96 1302 aa16.12■□□□□ 0.17
NLRC3-202ENST00000359128 KIF16BQ96L93 1317 aa16.11■□□□□ 0.17
NLRC3-202ENST00000359128 KIF3AQ9Y496 699 aa16.11■□□□□ 0.17
NLRC3-202ENST00000359128 CLUAP1Q96AJ1 413 aa16.11■□□□□ 0.17
NLRC3-202ENST00000359128 LRRFIP1Q32MZ4 808 aaKnown RBP16.1■□□□□ 0.17
NLRC3-202ENST00000359128 EIF2S2P20042 333 aaKnown RBP16.09■□□□□ 0.17
NLRC3-202ENST00000359128 SYNE3Q6ZMZ3 975 aa16.09■□□□□ 0.17
NLRC3-202ENST00000359128 PHLDB1Q86UU1 1377 aa16.08■□□□□ 0.17
NLRC3-202ENST00000359128 RRP7AQ9Y3A4 280 aaKnown RBP16.08■□□□□ 0.17
NLRC3-202ENST00000359128 A0A0U1RQG5 324 aaPredicted RBP16.08■□□□□ 0.16
NLRC3-202ENST00000359128 SF3A1Q15459 793 aaKnown RBP16.08■□□□□ 0.16
NLRC3-202ENST00000359128 L3MBTL2Q969R5 705 aa16.08■□□□□ 0.16
NLRC3-202ENST00000359128 PRDM2Q13029 1718 aa16.07■□□□□ 0.16
NLRC3-202ENST00000359128 RILPL2Q969X0 211 aa16.07■□□□□ 0.16
NLRC3-202ENST00000359128 KIF15Q9NS87 1388 aa16.07■□□□□ 0.16
NLRC3-202ENST00000359128 RBM33Q96EV2 1170 aaKnown RBP16.07■□□□□ 0.16
NLRC3-202ENST00000359128 C9orf78Q9NZ63 289 aaPredicted RBP16.06■□□□□ 0.16
NLRC3-202ENST00000359128 H3BQV1 296 aa16.06■□□□□ 0.16
NLRC3-202ENST00000359128 IFFO2Q5TF58 517 aa16.06■□□□□ 0.16
NLRC3-202ENST00000359128 TPD52L1Q16890 204 aaPredicted RBP16.05■□□□□ 0.16
NLRC3-202ENST00000359128 NLRP13Q86W25 1043 aa16.05■□□□□ 0.16
NLRC3-202ENST00000359128 TCERG1O14776 1098 aaKnown RBP16.05■□□□□ 0.16
NLRC3-202ENST00000359128 DDX58O95786 925 aaKnown RBP16.05■□□□□ 0.16
NLRC3-202ENST00000359128 CHMP4CQ96CF2 233 aa16.04■□□□□ 0.16
NLRC3-202ENST00000359128 PANK3Q9H999 370 aa16.04■□□□□ 0.16
NLRC3-202ENST00000359128 ANO8Q9HCE9 1232 aaPredicted RBP16.04■□□□□ 0.16
NLRC3-202ENST00000359128 CNKSR2Q8WXI2 1034 aa16.04■□□□□ 0.16
NLRC3-202ENST00000359128 ELL2O00472 640 aaPredicted RBP16.04■□□□□ 0.16
NLRC3-202ENST00000359128 ST18O60284 1047 aa16.04■□□□□ 0.16
NLRC3-202ENST00000359128 PES1O00541 588 aaKnown RBP16.03■□□□□ 0.16
NLRC3-202ENST00000359128 FAM184AQ8NB25 1140 aa16.03■□□□□ 0.16
NLRC3-202ENST00000359128 DHX16O60231 1041 aaKnown RBP16.02■□□□□ 0.16
NLRC3-202ENST00000359128 TPM2P07951 284 aa16.02■□□□□ 0.16
NLRC3-202ENST00000359128 SF3B2Q13435 895 aaKnown RBP16.02■□□□□ 0.15
NLRC3-202ENST00000359128 RAPGEF4Q8WZA2 1011 aa16.02■□□□□ 0.15
NLRC3-202ENST00000359128 NECTIN2Q92692 538 aa16.01■□□□□ 0.15
NLRC3-202ENST00000359128 RTN4Q9NQC3 1192 aaKnown RBP16.01■□□□□ 0.15
NLRC3-202ENST00000359128 FOXD4L1Q9NU39 408 aa16.01■□□□□ 0.15
NLRC3-202ENST00000359128 APPP05067 770 aa16.01■□□□□ 0.15
NLRC3-202ENST00000359128 SLKQ9H2G2 1235 aaPredicted RBP16.01■□□□□ 0.15
NLRC3-202ENST00000359128 WASHC2AQ641Q2 1341 aa16.01■□□□□ 0.15
NLRC3-202ENST00000359128 TPM3P06753 285 aa16■□□□□ 0.15
NLRC3-202ENST00000359128 GZF1Q9H116 711 aaPredicted RBP15.99■□□□□ 0.15
NLRC3-202ENST00000359128 MYBBP1AQ9BQG0 1328 aaKnown RBP15.99■□□□□ 0.15
NLRC3-202ENST00000359128 DIAPH1O60610 1272 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms