RNA–Protein interactions for RNA: ENST00000358545.6

TNFSF11-202, Transcript of TNF superfamily member 11, humanhuman

TSL 1 (best) BASIC

Gene TNFSF11, Length 1,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-202ENST00000358545 UHRF1BP1Q6BDS2 1440 aa10.92□□□□□ -0.66
TNFSF11-202ENST00000358545 IQSEC2Q5JU85 1478 aa10.92□□□□□ -0.66
TNFSF11-202ENST00000358545 CEBPAP49715 358 aaPredicted RBP10.91□□□□□ -0.66
TNFSF11-202ENST00000358545 P3H3Q8IVL6 736 aa10.91□□□□□ -0.66
TNFSF11-202ENST00000358545 PTPRTO14522 1441 aa10.91□□□□□ -0.66
TNFSF11-202ENST00000358545 MAGI2Q86UL8 1455 aa10.9□□□□□ -0.66
TNFSF11-202ENST00000358545 C3P01024 1663 aa10.9□□□□□ -0.67
TNFSF11-202ENST00000358545 NKX1-1Q15270 411 aaPredicted RBP10.89□□□□□ -0.67
TNFSF11-202ENST00000358545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.89□□□□□ -0.67
TNFSF11-202ENST00000358545 SAMD9Q5K651 1589 aa10.89□□□□□ -0.67
TNFSF11-202ENST00000358545 VGFO15240 615 aaPredicted RBP10.88□□□□□ -0.67
TNFSF11-202ENST00000358545 FAM9AQ8IZU1 332 aaPredicted RBP10.88□□□□□ -0.67
TNFSF11-202ENST00000358545 NUP153P49790 1475 aaKnown RBP10.88□□□□□ -0.67
TNFSF11-202ENST00000358545 MED1Q15648 1581 aaPredicted RBP10.87□□□□□ -0.67
TNFSF11-202ENST00000358545 C9orf84Q5VXU9 1444 aa10.87□□□□□ -0.67
TNFSF11-202ENST00000358545 STK25O00506 426 aa10.87□□□□□ -0.67
TNFSF11-202ENST00000358545 CHRM1P11229 460 aaPredicted RBP10.87□□□□□ -0.67
TNFSF11-202ENST00000358545 GTPBP6O43824 516 aaPredicted RBP10.86□□□□□ -0.67
TNFSF11-202ENST00000358545 ATP10AO60312 1499 aa10.86□□□□□ -0.67
TNFSF11-202ENST00000358545 NBR1Q14596 966 aa10.85□□□□□ -0.67
TNFSF11-202ENST00000358545 PRXQ9BXM0 1461 aa10.83□□□□□ -0.68
TNFSF11-202ENST00000358545 PRKAR2AP13861 404 aaKnown RBP10.83□□□□□ -0.68
TNFSF11-202ENST00000358545 FARP1Q9Y4F1 1045 aaPredicted RBP10.83□□□□□ -0.68
TNFSF11-202ENST00000358545 NCOA1Q15788 1441 aa10.82□□□□□ -0.68
TNFSF11-202ENST00000358545 SCAPERQ9BY12 1400 aa10.82□□□□□ -0.68
TNFSF11-202ENST00000358545 UBAP1LF5GYI3 381 aa10.82□□□□□ -0.68
TNFSF11-202ENST00000358545 SUPT6HQ7KZ85 1726 aaKnown RBP10.81□□□□□ -0.68
TNFSF11-202ENST00000358545 MYO5CQ9NQX4 1742 aa10.81□□□□□ -0.68
TNFSF11-202ENST00000358545 PYGBP11216 843 aa10.81□□□□□ -0.68
TNFSF11-202ENST00000358545 FXR2P51116 673 aaKnown RBP eCLIP10.81□□□□□ -0.68
TNFSF11-202ENST00000358545 CAMSAP1Q5T5Y3 1602 aa10.8□□□□□ -0.68
TNFSF11-202ENST00000358545 SGIP1Q9BQI5 828 aa10.8□□□□□ -0.68
TNFSF11-202ENST00000358545 PLEKHD1A6NEE1 506 aa10.79□□□□□ -0.68
TNFSF11-202ENST00000358545 DIP2CQ9Y2E4 1556 aa10.79□□□□□ -0.68
TNFSF11-202ENST00000358545 CHRDL2Q6WN34 429 aa10.79□□□□□ -0.68
TNFSF11-202ENST00000358545 STK24Q9Y6E0 443 aa10.79□□□□□ -0.68
TNFSF11-202ENST00000358545 ZNF335Q9H4Z2 1342 aaPredicted RBP10.78□□□□□ -0.68
TNFSF11-202ENST00000358545 ABCA6Q8N139 1617 aa10.78□□□□□ -0.68
TNFSF11-202ENST00000358545 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.78□□□□□ -0.68
TNFSF11-202ENST00000358545 ZFP91Q96JP5 570 aaPredicted RBP10.78□□□□□ -0.68
TNFSF11-202ENST00000358545 BCL11BQ9C0K0 894 aaPredicted RBP10.78□□□□□ -0.68
TNFSF11-202ENST00000358545 TSPYL2Q9H2G4 693 aaPredicted RBP10.77□□□□□ -0.69
TNFSF11-202ENST00000358545 KDM5CP41229 1560 aa10.77□□□□□ -0.69
TNFSF11-202ENST00000358545 REREQ9P2R6 1566 aa10.76□□□□□ -0.69
TNFSF11-202ENST00000358545 CDK13Q14004 1512 aaKnown RBP10.76□□□□□ -0.69
TNFSF11-202ENST00000358545 PLCH2O75038 1416 aa10.76□□□□□ -0.69
TNFSF11-202ENST00000358545 TRAPPC8Q9Y2L5 1435 aa10.76□□□□□ -0.69
TNFSF11-202ENST00000358545 RYDENQ9NUL5 291 aaKnown RBP10.75□□□□□ -0.69
TNFSF11-202ENST00000358545 ZNF518AQ6AHZ1 1483 aa10.75□□□□□ -0.69
TNFSF11-202ENST00000358545 HSPA1LP34931 641 aa10.74□□□□□ -0.69
TNFSF11-202ENST00000358545 PIP4P2Q8N4L2 257 aa10.74□□□□□ -0.69
TNFSF11-202ENST00000358545 ZNF142P52746 1687 aaPredicted RBP10.74□□□□□ -0.69
TNFSF11-202ENST00000358545 MYO3AQ8NEV4 1616 aa10.73□□□□□ -0.69
TNFSF11-202ENST00000358545 MROH2AA6NES4 1674 aa10.73□□□□□ -0.69
TNFSF11-202ENST00000358545 NCKAP5LQ9HCH0 1330 aa10.72□□□□□ -0.69
TNFSF11-202ENST00000358545 AGLP35573 1532 aa10.72□□□□□ -0.69
TNFSF11-202ENST00000358545 KIF14Q15058 1648 aa10.72□□□□□ -0.69
TNFSF11-202ENST00000358545 RANGAP1P46060 587 aaPredicted RBP10.72□□□□□ -0.69
TNFSF11-202ENST00000358545 MYT1LQ9UL68 1186 aa10.72□□□□□ -0.69
TNFSF11-202ENST00000358545 ESF1Q9H501 851 aaKnown RBP10.71□□□□□ -0.69
TNFSF11-202ENST00000358545 ARHGAP5Q13017 1502 aa10.7□□□□□ -0.7
TNFSF11-202ENST00000358545 PIP4K2BP78356 416 aa10.7□□□□□ -0.7
TNFSF11-202ENST00000358545 AFAP1Q8N556 730 aa10.69□□□□□ -0.7
TNFSF11-202ENST00000358545 CDC42BPBQ9Y5S2 1711 aa10.69□□□□□ -0.7
TNFSF11-202ENST00000358545 CNTLNQ9NXG0 1405 aa10.69□□□□□ -0.7
TNFSF11-202ENST00000358545 CEP170BQ9Y4F5 1589 aaPredicted RBP10.69□□□□□ -0.7
TNFSF11-202ENST00000358545 CLTCQ00610 1675 aaKnown RBP10.69□□□□□ -0.7
TNFSF11-202ENST00000358545 ITSN2Q9NZM3 1697 aa10.69□□□□□ -0.7
TNFSF11-202ENST00000358545 EFCAB2Q5VUJ9 269 aa10.68□□□□□ -0.7
TNFSF11-202ENST00000358545 CCDC61Q9Y6R9 512 aa10.68□□□□□ -0.7
TNFSF11-202ENST00000358545 POLR1AO95602 1720 aaPredicted RBP10.68□□□□□ -0.7
TNFSF11-202ENST00000358545 KIDINS220Q9ULH0 1771 aa10.68□□□□□ -0.7
TNFSF11-202ENST00000358545 PLA2R1Q13018 1463 aa10.68□□□□□ -0.7
TNFSF11-202ENST00000358545 NPATQ14207 1427 aa10.67□□□□□ -0.7
TNFSF11-202ENST00000358545 TCOF1Q13428 1488 aaKnown RBP10.67□□□□□ -0.7
TNFSF11-202ENST00000358545 MLH3Q9UHC1 1453 aa10.67□□□□□ -0.7
TNFSF11-202ENST00000358545 ALKQ9UM73 1620 aa10.65□□□□□ -0.71
TNFSF11-202ENST00000358545 CPS1P31327 1500 aa10.64□□□□□ -0.71
TNFSF11-202ENST00000358545 ABCC1P33527 1531 aa10.64□□□□□ -0.71
TNFSF11-202ENST00000358545 TOM1O60784 492 aa10.63□□□□□ -0.71
TNFSF11-202ENST00000358545 ZNF467Q7Z7K2 595 aaPredicted RBP10.63□□□□□ -0.71
TNFSF11-202ENST00000358545 PREX2Q70Z35 1606 aa10.63□□□□□ -0.71
TNFSF11-202ENST00000358545 LRRIQ1Q96JM4 1722 aa10.63□□□□□ -0.71
TNFSF11-202ENST00000358545 ZMYM3Q14202 1370 aa10.62□□□□□ -0.71
TNFSF11-202ENST00000358545 NEURL4Q96JN8 1562 aa10.62□□□□□ -0.71
TNFSF11-202ENST00000358545 PCDHB8Q9UN66 801 aa10.62□□□□□ -0.71
TNFSF11-202ENST00000358545 PCDHB13Q9Y5F0 798 aa10.62□□□□□ -0.71
TNFSF11-202ENST00000358545 DNMT1P26358 1616 aaKnown RBP10.61□□□□□ -0.71
TNFSF11-202ENST00000358545 SETD1AO15047 1707 aaKnown RBP10.6□□□□□ -0.71
TNFSF11-202ENST00000358545 SHANK2Q9UPX8 1470 aa10.59□□□□□ -0.71
TNFSF11-202ENST00000358545 PTPRKQ15262 1439 aa10.59□□□□□ -0.71
TNFSF11-202ENST00000358545 CDC42BPAQ5VT25 1732 aa10.59□□□□□ -0.71
TNFSF11-202ENST00000358545 TROQ12816 1431 aaPredicted RBP10.59□□□□□ -0.71
TNFSF11-202ENST00000358545 VWDEQ8N2E2 1590 aa10.58□□□□□ -0.72
TNFSF11-202ENST00000358545 PAK3O75914 559 aaPredicted RBP10.58□□□□□ -0.72
TNFSF11-202ENST00000358545 PDAP1Q13442 181 aaKnown RBP10.58□□□□□ -0.72
TNFSF11-202ENST00000358545 ATP1B4Q9UN42 357 aaPredicted RBP10.58□□□□□ -0.72
TNFSF11-202ENST00000358545 SAMD9LQ8IVG5 1584 aa10.57□□□□□ -0.72
TNFSF11-202ENST00000358545 STRCP1A6NGW2 1772 aa10.57□□□□□ -0.72
TNFSF11-202ENST00000358545 RGS17Q9UGC6 210 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms