RNA–Protein interactions for RNA: ENST00000357570.9

CACNA1E-201, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1E, Length 7,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-201ENST00000357570 JPH4Q96JJ6 628 aa13.42□□□□□ -0.26
CACNA1E-201ENST00000357570 NOL8Q76FK4 1167 aaKnown RBP13.42□□□□□ -0.26
CACNA1E-201ENST00000357570 NECTIN2Q92692 538 aa13.41□□□□□ -0.26
CACNA1E-201ENST00000357570 EIF2S2P20042 333 aaKnown RBP13.41□□□□□ -0.26
CACNA1E-201ENST00000357570 CHMP4AQ9BY43 222 aa13.4□□□□□ -0.26
CACNA1E-201ENST00000357570 NUTM2GQ5VZR2 741 aa13.4□□□□□ -0.27
CACNA1E-201ENST00000357570 EIF3AQ14152 1382 aaKnown RBP13.39□□□□□ -0.27
CACNA1E-201ENST00000357570 KTN1Q86UP2 1357 aaKnown RBP13.39□□□□□ -0.27
CACNA1E-201ENST00000357570 SMARCA2P51531 1590 aa13.39□□□□□ -0.27
CACNA1E-201ENST00000357570 MINK1Q8N4C8 1332 aaPredicted RBP13.39□□□□□ -0.27
CACNA1E-201ENST00000357570 TEFQ10587 303 aa13.39□□□□□ -0.27
CACNA1E-201ENST00000357570 SMC4Q9NTJ3 1288 aa13.39□□□□□ -0.27
CACNA1E-201ENST00000357570 ARHGAP35Q9NRY4 1499 aa13.39□□□□□ -0.27
CACNA1E-201ENST00000357570 L1TD1Q5T7N2 865 aaKnown RBP13.38□□□□□ -0.27
CACNA1E-201ENST00000357570 RBM33Q96EV2 1170 aaKnown RBP13.38□□□□□ -0.27
CACNA1E-201ENST00000357570 COG3Q96JB2 828 aa13.38□□□□□ -0.27
CACNA1E-201ENST00000357570 ANKRD30AQ9BXX3 1397 aa13.38□□□□□ -0.27
CACNA1E-201ENST00000357570 AMOTL1Q8IY63 956 aa13.38□□□□□ -0.27
CACNA1E-201ENST00000357570 DHX16O60231 1041 aaKnown RBP13.37□□□□□ -0.27
CACNA1E-201ENST00000357570 ELL2O00472 640 aaPredicted RBP13.37□□□□□ -0.27
CACNA1E-201ENST00000357570 HSPA5P11021 654 aaKnown RBP13.36□□□□□ -0.27
CACNA1E-201ENST00000357570 FAM177BA6PVY3 158 aa13.36□□□□□ -0.27
CACNA1E-201ENST00000357570 HDAC5Q9UQL6 1122 aa13.35□□□□□ -0.27
CACNA1E-201ENST00000357570 CLUAP1Q96AJ1 413 aa13.35□□□□□ -0.27
CACNA1E-201ENST00000357570 CEP89Q96ST8 783 aa13.34□□□□□ -0.27
CACNA1E-201ENST00000357570 STRN4Q9NRL3 753 aa13.34□□□□□ -0.27
CACNA1E-201ENST00000357570 BAZ1AQ9NRL2 1556 aaPredicted RBP13.34□□□□□ -0.27
CACNA1E-201ENST00000357570 PES1O00541 588 aaKnown RBP13.34□□□□□ -0.27
CACNA1E-201ENST00000357570 CCAR1Q8IX12 1150 aaKnown RBP13.34□□□□□ -0.27
CACNA1E-201ENST00000357570 RRP7AQ9Y3A4 280 aaKnown RBP13.34□□□□□ -0.27
CACNA1E-201ENST00000357570 MPHOSPH9Q99550 1183 aa13.34□□□□□ -0.27
CACNA1E-201ENST00000357570 HMMRO75330 724 aa13.32□□□□□ -0.28
CACNA1E-201ENST00000357570 APPP05067 770 aa13.32□□□□□ -0.28
CACNA1E-201ENST00000357570 FYB1O15117 783 aa13.32□□□□□ -0.28
CACNA1E-201ENST00000357570 AKAP17AQ02040 695 aaKnown RBP13.31□□□□□ -0.28
CACNA1E-201ENST00000357570 SLC4A3P48751 1232 aa13.31□□□□□ -0.28
CACNA1E-201ENST00000357570 LMOD3Q0VAK6 560 aa13.31□□□□□ -0.28
CACNA1E-201ENST00000357570 NLRP2Q9NX02 1062 aa13.31□□□□□ -0.28
CACNA1E-201ENST00000357570 A0A0U1RQG5 324 aaPredicted RBP13.31□□□□□ -0.28
CACNA1E-201ENST00000357570 TNIKQ9UKE5 1360 aa13.3□□□□□ -0.28
CACNA1E-201ENST00000357570 NEXNQ0ZGT2 675 aa13.3□□□□□ -0.28
CACNA1E-201ENST00000357570 RILPL2Q969X0 211 aa13.29□□□□□ -0.28
CACNA1E-201ENST00000357570 CFAP44Q96MT7 982 aa13.29□□□□□ -0.28
CACNA1E-201ENST00000357570 C9orf78Q9NZ63 289 aaPredicted RBP13.29□□□□□ -0.28
CACNA1E-201ENST00000357570 NAP1L5Q96NT1 182 aaPredicted RBP13.29□□□□□ -0.28
CACNA1E-201ENST00000357570 PLIN1O60240 522 aa13.28□□□□□ -0.28
CACNA1E-201ENST00000357570 MTMR7Q9Y216 660 aa13.28□□□□□ -0.28
CACNA1E-201ENST00000357570 HTATSF1O43719 755 aaKnown RBP13.28□□□□□ -0.28
CACNA1E-201ENST00000357570 RAPGEF4Q8WZA2 1011 aa13.28□□□□□ -0.28
CACNA1E-201ENST00000357570 CCDC34Q96HJ3 373 aa13.28□□□□□ -0.28
CACNA1E-201ENST00000357570 FOXD4L1Q9NU39 408 aa13.28□□□□□ -0.28
CACNA1E-201ENST00000357570 VGFO15240 615 aaPredicted RBP13.28□□□□□ -0.28
CACNA1E-201ENST00000357570 FOXD4L5Q5VV16 416 aaPredicted RBP13.27□□□□□ -0.29
CACNA1E-201ENST00000357570 FOXD4L4Q8WXT5 416 aaPredicted RBP13.27□□□□□ -0.29
CACNA1E-201ENST00000357570 PROSER2Q86WR7 435 aaPredicted RBP13.27□□□□□ -0.29
CACNA1E-201ENST00000357570 MFAP1P55081 439 aaKnown RBP13.26□□□□□ -0.29
CACNA1E-201ENST00000357570 CCDC27Q2M243 656 aa13.26□□□□□ -0.29
CACNA1E-201ENST00000357570 CCDC43Q96MW1 224 aaKnown RBP13.26□□□□□ -0.29
CACNA1E-201ENST00000357570 RWDD1Q9H446 243 aaPredicted RBP13.26□□□□□ -0.29
CACNA1E-201ENST00000357570 SF3A1Q15459 793 aaKnown RBP13.26□□□□□ -0.29
CACNA1E-201ENST00000357570 ESCO1Q5FWF5 840 aa13.26□□□□□ -0.29
CACNA1E-201ENST00000357570 PTPRGP23470 1445 aa13.26□□□□□ -0.29
CACNA1E-201ENST00000357570 TPM4P67936 248 aa13.26□□□□□ -0.29
CACNA1E-201ENST00000357570 PPP4R2Q9NY27 417 aa13.26□□□□□ -0.29
CACNA1E-201ENST00000357570 AIMP1Q12904 312 aaKnown RBP13.25□□□□□ -0.29
CACNA1E-201ENST00000357570 SYNE3Q6ZMZ3 975 aa13.25□□□□□ -0.29
CACNA1E-201ENST00000357570 RBM42Q9BTD8 480 aaKnown RBP13.25□□□□□ -0.29
CACNA1E-201ENST00000357570 IKQ13123 557 aaPredicted RBP13.25□□□□□ -0.29
CACNA1E-201ENST00000357570 TPD52L1Q16890 204 aaPredicted RBP13.25□□□□□ -0.29
CACNA1E-201ENST00000357570 KANK4Q5T7N3 995 aaPredicted RBP13.25□□□□□ -0.29
CACNA1E-201ENST00000357570 ABCC8Q09428 1581 aa13.24□□□□□ -0.29
CACNA1E-201ENST00000357570 SETD5Q9C0A6 1442 aa13.24□□□□□ -0.29
CACNA1E-201ENST00000357570 EVC2Q86UK5 1308 aa13.23□□□□□ -0.29
CACNA1E-201ENST00000357570 TCERG1O14776 1098 aaKnown RBP13.22□□□□□ -0.29
CACNA1E-201ENST00000357570 H3BQV1 296 aa13.22□□□□□ -0.29
CACNA1E-201ENST00000357570 IFFO2Q5TF58 517 aa13.22□□□□□ -0.29
CACNA1E-201ENST00000357570 FHOD3Q2V2M9 1422 aa13.22□□□□□ -0.29
CACNA1E-201ENST00000357570 FMN1Q68DA7 1419 aa13.22□□□□□ -0.29
CACNA1E-201ENST00000357570 PAXIP1Q6ZW49 1069 aaPredicted RBP13.22□□□□□ -0.29
CACNA1E-201ENST00000357570 RTN4Q9NQC3 1192 aaKnown RBP13.22□□□□□ -0.29
CACNA1E-201ENST00000357570 PRDM2Q13029 1718 aa13.22□□□□□ -0.29
CACNA1E-201ENST00000357570 BCL2L13Q9BXK5 485 aa13.21□□□□□ -0.29
CACNA1E-201ENST00000357570 RSPH4AQ5TD94 716 aa13.21□□□□□ -0.29
CACNA1E-201ENST00000357570 KIF16BQ96L93 1317 aa13.21□□□□□ -0.3
CACNA1E-201ENST00000357570 GZF1Q9H116 711 aaPredicted RBP13.2□□□□□ -0.3
CACNA1E-201ENST00000357570 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.2□□□□□ -0.3
CACNA1E-201ENST00000357570 CCDC18Q5T9S5 1454 aa13.2□□□□□ -0.3
CACNA1E-201ENST00000357570 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.2□□□□□ -0.3
CACNA1E-201ENST00000357570 MSNP26038 577 aaKnown RBP13.2□□□□□ -0.3
CACNA1E-201ENST00000357570 FAM184AQ8NB25 1140 aa13.2□□□□□ -0.3
CACNA1E-201ENST00000357570 RCAN3Q9UKA8 241 aa13.19□□□□□ -0.3
CACNA1E-201ENST00000357570 FOXD4L6Q3SYB3 417 aaPredicted RBP13.19□□□□□ -0.3
CACNA1E-201ENST00000357570 MCTP1Q6DN14 999 aa13.19□□□□□ -0.3
CACNA1E-201ENST00000357570 FOXD4L3Q6VB84 417 aaPredicted RBP13.19□□□□□ -0.3
CACNA1E-201ENST00000357570 TMEM132AQ24JP5 1023 aa13.19□□□□□ -0.3
CACNA1E-201ENST00000357570 RIC3Q7Z5B4 369 aa13.19□□□□□ -0.3
CACNA1E-201ENST00000357570 ZNF428Q96B54 188 aa13.19□□□□□ -0.3
CACNA1E-201ENST00000357570 DDX58O95786 925 aaKnown RBP13.18□□□□□ -0.3
CACNA1E-201ENST00000357570 WASHC2AQ641Q2 1341 aa13.18□□□□□ -0.3
CACNA1E-201ENST00000357570 RALBP1Q15311 655 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms