RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 ERCC6Q03468 1493 aa19.54■□□□□ 0.72
TRAPPC11-202ENST00000357207 FOXD4L1Q9NU39 408 aa19.54■□□□□ 0.72
TRAPPC11-202ENST00000357207 PDS5BQ9NTI5 1447 aa19.54■□□□□ 0.72
TRAPPC11-202ENST00000357207 CNTLNQ9NXG0 1405 aa19.54■□□□□ 0.72
TRAPPC11-202ENST00000357207 COG6Q9Y2V7 657 aa19.54■□□□□ 0.72
TRAPPC11-202ENST00000357207 RRP7AQ9Y3A4 280 aaKnown RBP19.53■□□□□ 0.72
TRAPPC11-202ENST00000357207 BCL2L13Q9BXK5 485 aa19.52■□□□□ 0.72
TRAPPC11-202ENST00000357207 TAOK2Q9UL54 1235 aa19.52■□□□□ 0.72
TRAPPC11-202ENST00000357207 CCDC144AA2RUR9 1427 aa19.52■□□□□ 0.72
TRAPPC11-202ENST00000357207 APAF1O14727 1248 aa19.52■□□□□ 0.72
TRAPPC11-202ENST00000357207 FGD6Q6ZV73 1430 aa19.51■□□□□ 0.71
TRAPPC11-202ENST00000357207 HSP90AA2PQ14568 343 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC11-202ENST00000357207 ARID3AQ99856 593 aa19.51■□□□□ 0.71
TRAPPC11-202ENST00000357207 IGF1RP08069 1367 aa19.5■□□□□ 0.71
TRAPPC11-202ENST00000357207 KIF3BO15066 747 aa19.5■□□□□ 0.71
TRAPPC11-202ENST00000357207 LMOD2Q6P5Q4 547 aa19.49■□□□□ 0.71
TRAPPC11-202ENST00000357207 TERF2IPQ9NYB0 399 aa19.48■□□□□ 0.71
TRAPPC11-202ENST00000357207 HMMRO75330 724 aa19.48■□□□□ 0.71
TRAPPC11-202ENST00000357207 ZKSCAN2Q63HK3 967 aa19.47■□□□□ 0.71
TRAPPC11-202ENST00000357207 NFKBIBQ15653 356 aa19.47■□□□□ 0.71
TRAPPC11-202ENST00000357207 NGEFQ8N5V2 710 aa19.46■□□□□ 0.71
TRAPPC11-202ENST00000357207 DDX49Q9Y6V7 483 aaKnown RBP19.46■□□□□ 0.71
TRAPPC11-202ENST00000357207 RRBP1Q9P2E9 1410 aaKnown RBP19.46■□□□□ 0.71
TRAPPC11-202ENST00000357207 LRRC9Q6ZRR7 1453 aa19.45■□□□□ 0.7
TRAPPC11-202ENST00000357207 ST18O60284 1047 aa19.45■□□□□ 0.7
TRAPPC11-202ENST00000357207 HDGFP51858 240 aaKnown RBP19.45■□□□□ 0.7
TRAPPC11-202ENST00000357207 SKOR2Q2VWA4 1001 aaPredicted RBP19.45■□□□□ 0.7
TRAPPC11-202ENST00000357207 MYOM3Q5VTT5 1437 aa19.43■□□□□ 0.7
TRAPPC11-202ENST00000357207 STK31Q9BXU1 1019 aa19.43■□□□□ 0.7
TRAPPC11-202ENST00000357207 TRAK1Q9UPV9 953 aa19.43■□□□□ 0.7
TRAPPC11-202ENST00000357207 TRIM6-TRIM34B2RNG4 842 aa19.42■□□□□ 0.7
TRAPPC11-202ENST00000357207 SPAG9O60271 1321 aaKnown RBP19.42■□□□□ 0.7
TRAPPC11-202ENST00000357207 CHMP5Q9NZZ3 219 aa19.42■□□□□ 0.7
TRAPPC11-202ENST00000357207 ANKRD45Q5TZF3 282 aa19.41■□□□□ 0.7
TRAPPC11-202ENST00000357207 JPH4Q96JJ6 628 aa19.41■□□□□ 0.7
TRAPPC11-202ENST00000357207 PAK3O75914 559 aaPredicted RBP19.4■□□□□ 0.7
TRAPPC11-202ENST00000357207 HTATSF1O43719 755 aaKnown RBP19.39■□□□□ 0.69
TRAPPC11-202ENST00000357207 LMOD3Q0VAK6 560 aa19.39■□□□□ 0.69
TRAPPC11-202ENST00000357207 BRD4O60885 1362 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC11-202ENST00000357207 NOL8Q76FK4 1167 aaKnown RBP19.38■□□□□ 0.69
TRAPPC11-202ENST00000357207 SLC4A10Q6U841 1118 aa19.38■□□□□ 0.69
TRAPPC11-202ENST00000357207 ARAP1Q96P48 1450 aa19.38■□□□□ 0.69
TRAPPC11-202ENST00000357207 PHF14O94880 888 aa19.37■□□□□ 0.69
TRAPPC11-202ENST00000357207 ELL2O00472 640 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC11-202ENST00000357207 MLECQ14165 292 aa19.36■□□□□ 0.69
TRAPPC11-202ENST00000357207 VSIG10Q8N0Z9 540 aa19.35■□□□□ 0.69
TRAPPC11-202ENST00000357207 DDX19BQ9UMR2 479 aa19.35■□□□□ 0.69
TRAPPC11-202ENST00000357207 FOXD4L5Q5VV16 416 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC11-202ENST00000357207 FOXD4L4Q8WXT5 416 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC11-202ENST00000357207 CHMP4AQ9BY43 222 aa19.35■□□□□ 0.69
TRAPPC11-202ENST00000357207 CSPP1Q1MSJ5 1256 aa19.35■□□□□ 0.69
TRAPPC11-202ENST00000357207 CDCA7LQ96GN5 454 aa19.35■□□□□ 0.69
TRAPPC11-202ENST00000357207 DZIP1LQ8IYY4 767 aaKnown RBP19.34■□□□□ 0.69
TRAPPC11-202ENST00000357207 ZNF644Q9H582 1327 aaPredicted RBP19.34■□□□□ 0.69
TRAPPC11-202ENST00000357207 NUTM2DQ5VT03 806 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC11-202ENST00000357207 ADAMTS8Q9UP79 889 aa19.31■□□□□ 0.68
TRAPPC11-202ENST00000357207 CUX1P39880 1505 aa19.3■□□□□ 0.68
TRAPPC11-202ENST00000357207 MIA2Q96PC5 1412 aa19.3■□□□□ 0.68
TRAPPC11-202ENST00000357207 AKNAQ7Z591 1439 aa19.3■□□□□ 0.68
TRAPPC11-202ENST00000357207 BACH2Q9BYV9 841 aa19.3■□□□□ 0.68
TRAPPC11-202ENST00000357207 HDAC5Q9UQL6 1122 aa19.29■□□□□ 0.68
TRAPPC11-202ENST00000357207 AAMPQ13685 434 aa19.29■□□□□ 0.68
TRAPPC11-202ENST00000357207 GNL2Q13823 731 aaKnown RBP19.29■□□□□ 0.68
TRAPPC11-202ENST00000357207 FANCD2Q9BXW9 1451 aa19.29■□□□□ 0.68
TRAPPC11-202ENST00000357207 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.28■□□□□ 0.68
TRAPPC11-202ENST00000357207 C22orf23Q9BZE7 217 aa19.28■□□□□ 0.68
TRAPPC11-202ENST00000357207 FGD5Q6ZNL6 1462 aa19.28■□□□□ 0.68
TRAPPC11-202ENST00000357207 CCDC184Q52MB2 194 aa19.28■□□□□ 0.68
TRAPPC11-202ENST00000357207 PNISRQ8TF01 805 aaKnown RBP19.28■□□□□ 0.68
TRAPPC11-202ENST00000357207 CASKIN1Q8WXD9 1431 aa19.28■□□□□ 0.68
TRAPPC11-202ENST00000357207 PANK1Q8TE04 598 aa19.27■□□□□ 0.68
TRAPPC11-202ENST00000357207 WASHC2CQ9Y4E1 1318 aa19.27■□□□□ 0.68
TRAPPC11-202ENST00000357207 RUNDC1Q96C34 613 aa19.27■□□□□ 0.68
TRAPPC11-202ENST00000357207 GPATCH3Q96I76 525 aa19.27■□□□□ 0.68
TRAPPC11-202ENST00000357207 ERICH3Q5RHP9 1530 aa19.27■□□□□ 0.68
TRAPPC11-202ENST00000357207 NCOA2Q15596 1464 aa19.27■□□□□ 0.67
TRAPPC11-202ENST00000357207 BRPF3Q9ULD4 1205 aa19.26■□□□□ 0.67
TRAPPC11-202ENST00000357207 FRAT2O75474 233 aaPredicted RBP19.26■□□□□ 0.67
TRAPPC11-202ENST00000357207 KIF16BQ96L93 1317 aa19.26■□□□□ 0.67
TRAPPC11-202ENST00000357207 NBPF8Q3BBV2 869 aa19.25■□□□□ 0.67
TRAPPC11-202ENST00000357207 IL27Q8NEV9 243 aa19.25■□□□□ 0.67
TRAPPC11-202ENST00000357207 EVC2Q86UK5 1308 aa19.25■□□□□ 0.67
TRAPPC11-202ENST00000357207 REC8O95072 547 aa19.25■□□□□ 0.67
TRAPPC11-202ENST00000357207 AMER1Q5JTC6 1135 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC11-202ENST00000357207 FAM43AQ8N2R8 423 aa19.24■□□□□ 0.67
TRAPPC11-202ENST00000357207 RILPL2Q969X0 211 aa19.24■□□□□ 0.67
TRAPPC11-202ENST00000357207 FOXD4L6Q3SYB3 417 aaPredicted RBP19.24■□□□□ 0.67
TRAPPC11-202ENST00000357207 FOXD4L3Q6VB84 417 aaPredicted RBP19.24■□□□□ 0.67
TRAPPC11-202ENST00000357207 ATP6V1DQ9Y5K8 247 aa19.24■□□□□ 0.67
TRAPPC11-202ENST00000357207 MRE11P49959 708 aa19.23■□□□□ 0.67
TRAPPC11-202ENST00000357207 LNPKQ9C0E8 428 aa19.23■□□□□ 0.67
TRAPPC11-202ENST00000357207 TPM4P67936 248 aa19.22■□□□□ 0.67
TRAPPC11-202ENST00000357207 WDR97A6NE52 1622 aa19.22■□□□□ 0.67
TRAPPC11-202ENST00000357207 ANKRD50Q9ULJ7 1429 aa19.22■□□□□ 0.67
TRAPPC11-202ENST00000357207 SMG6Q86US8 1419 aaKnown RBP19.22■□□□□ 0.67
TRAPPC11-202ENST00000357207 FYCO1Q9BQS8 1478 aa19.22■□□□□ 0.67
TRAPPC11-202ENST00000357207 RIPK4P57078 832 aa19.21■□□□□ 0.67
TRAPPC11-202ENST00000357207 STAC3Q96MF2 364 aa19.21■□□□□ 0.67
TRAPPC11-202ENST00000357207 MSH5O43196 834 aa19.2■□□□□ 0.66
TRAPPC11-202ENST00000357207 VGFO15240 615 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms