RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 BCL2L13Q9BXK5 485 aa16.03■□□□□ 0.16
BDNF-202ENST00000356660 POGKQ9P215 609 aa16.03■□□□□ 0.16
BDNF-202ENST00000356660 APAF1O14727 1248 aa16.03■□□□□ 0.16
BDNF-202ENST00000356660 GGT6Q6P531 493 aa16.02■□□□□ 0.15
BDNF-202ENST00000356660 ZBTB7CA1YPR0 619 aa16.01■□□□□ 0.15
BDNF-202ENST00000356660 FTSJ3Q8IY81 847 aaKnown RBP16.01■□□□□ 0.15
BDNF-202ENST00000356660 EFCAB5A4FU69 1503 aa16■□□□□ 0.15
BDNF-202ENST00000356660 MFAP1P55081 439 aaKnown RBP16■□□□□ 0.15
BDNF-202ENST00000356660 HSP90AA2PQ14568 343 aaPredicted RBP16■□□□□ 0.15
BDNF-202ENST00000356660 RNF123Q5XPI4 1314 aa16■□□□□ 0.15
BDNF-202ENST00000356660 PDE4CQ08493 712 aa15.99■□□□□ 0.15
BDNF-202ENST00000356660 C14orf37Q86TY3 774 aa15.99■□□□□ 0.15
BDNF-202ENST00000356660 NCLP19338 710 aaKnown RBP15.99■□□□□ 0.15
BDNF-202ENST00000356660 RRP7AQ9Y3A4 280 aaKnown RBP15.98■□□□□ 0.15
BDNF-202ENST00000356660 CDCA8Q53HL2 280 aa15.98■□□□□ 0.15
BDNF-202ENST00000356660 RPRD2Q5VT52 1461 aaKnown RBP15.98■□□□□ 0.15
BDNF-202ENST00000356660 BCAR3O75815 825 aa15.97■□□□□ 0.15
BDNF-202ENST00000356660 DHX29Q7Z478 1369 aaKnown RBP15.97■□□□□ 0.15
BDNF-202ENST00000356660 U2SURPO15042 1029 aaKnown RBP15.97■□□□□ 0.15
BDNF-202ENST00000356660 MLECQ14165 292 aa15.97■□□□□ 0.15
BDNF-202ENST00000356660 ZMYND15Q9H091 742 aa15.97■□□□□ 0.15
BDNF-202ENST00000356660 PANK1Q8TE04 598 aa15.97■□□□□ 0.15
BDNF-202ENST00000356660 JPH4Q96JJ6 628 aa15.97■□□□□ 0.15
BDNF-202ENST00000356660 WASHC2CQ9Y4E1 1318 aa15.97■□□□□ 0.15
BDNF-202ENST00000356660 FAM43AQ8N2R8 423 aa15.97■□□□□ 0.15
BDNF-202ENST00000356660 PDS5BQ9NTI5 1447 aa15.96■□□□□ 0.15
BDNF-202ENST00000356660 MIA2Q96PC5 1412 aa15.96■□□□□ 0.15
BDNF-202ENST00000356660 EHBP1L1Q8N3D4 1523 aa15.95■□□□□ 0.14
BDNF-202ENST00000356660 HSCBQ8IWL3 235 aa15.95■□□□□ 0.14
BDNF-202ENST00000356660 SUPT6HQ7KZ85 1726 aaKnown RBP15.95■□□□□ 0.14
BDNF-202ENST00000356660 CENPJQ9HC77 1338 aaPredicted RBP15.95■□□□□ 0.14
BDNF-202ENST00000356660 FOXD4L1Q9NU39 408 aa15.95■□□□□ 0.14
BDNF-202ENST00000356660 MYH16Q9H6N6 1097 aa15.94■□□□□ 0.14
BDNF-202ENST00000356660 HSP90AB1P08238 724 aaKnown RBP15.94■□□□□ 0.14
BDNF-202ENST00000356660 ARID3AQ99856 593 aa15.94■□□□□ 0.14
BDNF-202ENST00000356660 STK26Q9P289 416 aa15.94■□□□□ 0.14
BDNF-202ENST00000356660 CFAP53Q96M91 514 aa15.94■□□□□ 0.14
BDNF-202ENST00000356660 SOX12O15370 315 aa15.93■□□□□ 0.14
BDNF-202ENST00000356660 GAPVD1Q14C86 1478 aa15.93■□□□□ 0.14
BDNF-202ENST00000356660 CDK13Q14004 1512 aaKnown RBP15.93■□□□□ 0.14
BDNF-202ENST00000356660 DAPK1P53355 1430 aa15.92■□□□□ 0.14
BDNF-202ENST00000356660 KIAA1107Q9UPP5 1409 aa15.92■□□□□ 0.14
BDNF-202ENST00000356660 POLA1P09884 1462 aaPredicted RBP15.92■□□□□ 0.14
BDNF-202ENST00000356660 NUTM2DQ5VT03 806 aaPredicted RBP15.91■□□□□ 0.14
BDNF-202ENST00000356660 ANKRD50Q9ULJ7 1429 aa15.9■□□□□ 0.14
BDNF-202ENST00000356660 AMER1Q5JTC6 1135 aaPredicted RBP15.9■□□□□ 0.14
BDNF-202ENST00000356660 CFAP43Q8NDM7 1665 aa15.9■□□□□ 0.14
BDNF-202ENST00000356660 MAPK8IP3Q9UPT6 1336 aa15.9■□□□□ 0.14
BDNF-202ENST00000356660 CCDC144AA2RUR9 1427 aa15.89■□□□□ 0.13
BDNF-202ENST00000356660 RWDD1Q9H446 243 aaPredicted RBP15.89■□□□□ 0.13
BDNF-202ENST00000356660 GOLGA6L22H0YM25 854 aa15.88■□□□□ 0.13
BDNF-202ENST00000356660 PMFBP1Q8TBY8 1022 aa15.88■□□□□ 0.13
BDNF-202ENST00000356660 CGNL1Q0VF96 1302 aa15.87■□□□□ 0.13
BDNF-202ENST00000356660 KIF3BO15066 747 aa15.87■□□□□ 0.13
BDNF-202ENST00000356660 PPP2R1AP30153 589 aa15.87■□□□□ 0.13
BDNF-202ENST00000356660 C8orf34Q49A92 452 aa15.87■□□□□ 0.13
BDNF-202ENST00000356660 HMGXB3Q12766 1538 aa15.87■□□□□ 0.13
BDNF-202ENST00000356660 ABCC5O15440 1437 aa15.87■□□□□ 0.13
BDNF-202ENST00000356660 SRPK2P78362 688 aaKnown RBP15.87■□□□□ 0.13
BDNF-202ENST00000356660 E9PSI1 815 aa15.86■□□□□ 0.13
BDNF-202ENST00000356660 NESP48681 1621 aa15.86■□□□□ 0.13
BDNF-202ENST00000356660 MORC1Q86VD1 984 aa15.86■□□□□ 0.13
BDNF-202ENST00000356660 TPRNQ4KMQ1 711 aa15.85■□□□□ 0.13
BDNF-202ENST00000356660 EPRSP07814 1512 aaKnown RBP15.85■□□□□ 0.13
BDNF-202ENST00000356660 EFCAB2Q5VUJ9 269 aa15.84■□□□□ 0.13
BDNF-202ENST00000356660 ITPRIPQ8IWB1 547 aa15.84■□□□□ 0.13
BDNF-202ENST00000356660 DUSP27Q5VZP5 1158 aa15.84■□□□□ 0.13
BDNF-202ENST00000356660 CARMIL2Q6F5E8 1435 aa15.84■□□□□ 0.13
BDNF-202ENST00000356660 TOPBP1Q92547 1522 aa15.83■□□□□ 0.13
BDNF-202ENST00000356660 SNAPC4Q5SXM2 1469 aa15.82■□□□□ 0.12
BDNF-202ENST00000356660 SPATA31E1Q6ZUB1 1445 aa15.82■□□□□ 0.12
BDNF-202ENST00000356660 A0A0G2JS52 829 aa15.82■□□□□ 0.12
BDNF-202ENST00000356660 TRAK2O60296 914 aa15.82■□□□□ 0.12
BDNF-202ENST00000356660 IGHDP01880 384 aa15.82■□□□□ 0.12
BDNF-202ENST00000356660 LMOD2Q6P5Q4 547 aa15.82■□□□□ 0.12
BDNF-202ENST00000356660 PRG4Q92954 1404 aaPredicted RBP15.82■□□□□ 0.12
BDNF-202ENST00000356660 MSNP26038 577 aaKnown RBP15.81■□□□□ 0.12
BDNF-202ENST00000356660 U2AF1L5P0DN76 240 aaPredicted RBP15.81■□□□□ 0.12
BDNF-202ENST00000356660 U2AF1Q01081 240 aaKnown RBP eCLIP15.81■□□□□ 0.12
BDNF-202ENST00000356660 ROCK1Q13464 1354 aa15.81■□□□□ 0.12
BDNF-202ENST00000356660 SEC24BO95487 1268 aa15.8■□□□□ 0.12
BDNF-202ENST00000356660 CHMP5Q9NZZ3 219 aa15.8■□□□□ 0.12
BDNF-202ENST00000356660 PDZRN3Q9UPQ7 1066 aa15.8■□□□□ 0.12
BDNF-202ENST00000356660 LRPPRCP42704 1394 aaKnown RBP15.8■□□□□ 0.12
BDNF-202ENST00000356660 ABCA10Q8WWZ4 1543 aa15.8■□□□□ 0.12
BDNF-202ENST00000356660 GBP4Q96PP9 640 aa15.79■□□□□ 0.12
BDNF-202ENST00000356660 SMC4Q9NTJ3 1288 aa15.79■□□□□ 0.12
BDNF-202ENST00000356660 C22orf23Q9BZE7 217 aa15.79■□□□□ 0.12
BDNF-202ENST00000356660 SLFN5Q08AF3 891 aa15.79■□□□□ 0.12
BDNF-202ENST00000356660 PANK2Q9BZ23 570 aa15.79■□□□□ 0.12
BDNF-202ENST00000356660 PRDM2Q13029 1718 aa15.79■□□□□ 0.12
BDNF-202ENST00000356660 UGGT2Q9NYU1 1516 aa15.79■□□□□ 0.12
BDNF-202ENST00000356660 GRIN2BQ13224 1484 aa15.79■□□□□ 0.12
BDNF-202ENST00000356660 TEX14Q8IWB6 1497 aa15.78■□□□□ 0.12
BDNF-202ENST00000356660 KDM6BO15054 1643 aa15.78■□□□□ 0.12
BDNF-202ENST00000356660 RRAGDQ9NQL2 400 aaPredicted RBP15.77■□□□□ 0.12
BDNF-202ENST00000356660 MCM4P33991 863 aa15.77■□□□□ 0.11
BDNF-202ENST00000356660 PTMAP06454 111 aaKnown RBP15.76■□□□□ 0.11
BDNF-202ENST00000356660 DNTTIP2Q5QJE6 756 aaKnown RBP15.76■□□□□ 0.11
BDNF-202ENST00000356660 TBC1D2Q9BYX2 928 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms