RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 RGS3P49796 1198 aa16.08■□□□□ 0.17
SIRPA-201ENST00000356025 ADAMTS12P58397 1594 aa16.07■□□□□ 0.16
SIRPA-201ENST00000356025 TARBP1Q13395 1621 aaKnown RBP16.07■□□□□ 0.16
SIRPA-201ENST00000356025 RTN4Q9NQC3 1192 aaKnown RBP16.06■□□□□ 0.16
SIRPA-201ENST00000356025 DENND4BO75064 1496 aaPredicted RBP16.05■□□□□ 0.16
SIRPA-201ENST00000356025 TCOF1Q13428 1488 aaKnown RBP16.05■□□□□ 0.16
SIRPA-201ENST00000356025 NOP58Q9Y2X3 529 aaKnown RBP16.04■□□□□ 0.16
SIRPA-201ENST00000356025 MAGI1Q96QZ7 1491 aaPredicted RBP16.03■□□□□ 0.16
SIRPA-201ENST00000356025 TRAK1Q9UPV9 953 aa16.03■□□□□ 0.16
SIRPA-201ENST00000356025 SYNJ2O15056 1496 aa16.03■□□□□ 0.16
SIRPA-201ENST00000356025 FRAT1Q92837 279 aaPredicted RBP16.02■□□□□ 0.16
SIRPA-201ENST00000356025 STK26Q9P289 416 aa16.02■□□□□ 0.16
SIRPA-201ENST00000356025 ATP10BO94823 1461 aa16.02■□□□□ 0.15
SIRPA-201ENST00000356025 LRRIQ1Q96JM4 1722 aa16.02■□□□□ 0.15
SIRPA-201ENST00000356025 ADAMTS8Q9UP79 889 aa16.01■□□□□ 0.15
SIRPA-201ENST00000356025 RRP1P56182 461 aaKnown RBP16.01■□□□□ 0.15
SIRPA-201ENST00000356025 RRP7AQ9Y3A4 280 aaKnown RBP16.01■□□□□ 0.15
SIRPA-201ENST00000356025 KIAA0556O60303 1618 aa16.01■□□□□ 0.15
SIRPA-201ENST00000356025 RAPGEF6Q8TEU7 1601 aa16.01■□□□□ 0.15
SIRPA-201ENST00000356025 ARHGAP5Q13017 1502 aa16.01■□□□□ 0.15
SIRPA-201ENST00000356025 PZPP20742 1482 aa16■□□□□ 0.15
SIRPA-201ENST00000356025 PBRM1Q86U86 1689 aa16■□□□□ 0.15
SIRPA-201ENST00000356025 RSPH4AQ5TD94 716 aa16■□□□□ 0.15
SIRPA-201ENST00000356025 CFAP70Q5T0N1 1121 aa15.99■□□□□ 0.15
SIRPA-201ENST00000356025 STAG3Q9UJ98 1225 aa15.99■□□□□ 0.15
SIRPA-201ENST00000356025 PAK3O75914 559 aaPredicted RBP15.99■□□□□ 0.15
SIRPA-201ENST00000356025 CRBNQ96SW2 442 aa15.99■□□□□ 0.15
SIRPA-201ENST00000356025 PPM1GO15355 546 aaPredicted RBP15.98■□□□□ 0.15
SIRPA-201ENST00000356025 ERICH6BQ5W0A0 696 aa15.98■□□□□ 0.15
SIRPA-201ENST00000356025 KIF14Q15058 1648 aa15.98■□□□□ 0.15
SIRPA-201ENST00000356025 TMEM132EQ6IEE7 984 aa15.97■□□□□ 0.15
SIRPA-201ENST00000356025 FANCIQ9NVI1 1328 aa15.97■□□□□ 0.15
SIRPA-201ENST00000356025 SLC4A3P48751 1232 aa15.96■□□□□ 0.15
SIRPA-201ENST00000356025 TEX14Q8IWB6 1497 aa15.96■□□□□ 0.14
SIRPA-201ENST00000356025 EIF4G3O43432 1585 aaKnown RBP15.95■□□□□ 0.14
SIRPA-201ENST00000356025 APAF1O14727 1248 aa15.95■□□□□ 0.14
SIRPA-201ENST00000356025 PLEKHH2Q8IVE3 1493 aa15.94■□□□□ 0.14
SIRPA-201ENST00000356025 MLECQ14165 292 aa15.94■□□□□ 0.14
SIRPA-201ENST00000356025 BCL2L13Q9BXK5 485 aa15.94■□□□□ 0.14
SIRPA-201ENST00000356025 DHX29Q7Z478 1369 aaKnown RBP15.93■□□□□ 0.14
SIRPA-201ENST00000356025 CDCA8Q53HL2 280 aa15.93■□□□□ 0.14
SIRPA-201ENST00000356025 MORC1Q86VD1 984 aa15.92■□□□□ 0.14
SIRPA-201ENST00000356025 DISP3Q9P2K9 1392 aa15.91■□□□□ 0.14
SIRPA-201ENST00000356025 U2SURPO15042 1029 aaKnown RBP15.91■□□□□ 0.14
SIRPA-201ENST00000356025 C20orf194Q5TEA3 1177 aa15.91■□□□□ 0.14
SIRPA-201ENST00000356025 KDM5BQ9UGL1 1544 aa15.91■□□□□ 0.14
SIRPA-201ENST00000356025 CLUAP1Q96AJ1 413 aa15.91■□□□□ 0.14
SIRPA-201ENST00000356025 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.9■□□□□ 0.14
SIRPA-201ENST00000356025 ARXQ96QS3 562 aa15.9■□□□□ 0.14
SIRPA-201ENST00000356025 KANK1Q14678 1352 aa15.89■□□□□ 0.13
SIRPA-201ENST00000356025 DNMT1P26358 1616 aaKnown RBP15.89■□□□□ 0.13
SIRPA-201ENST00000356025 CEP170Q5SW79 1584 aa15.89■□□□□ 0.13
SIRPA-201ENST00000356025 SPATA31E1Q6ZUB1 1445 aa15.88■□□□□ 0.13
SIRPA-201ENST00000356025 GOLGA2Q08379 1002 aa15.88■□□□□ 0.13
SIRPA-201ENST00000356025 BRD4O60885 1362 aaPredicted RBP15.88■□□□□ 0.13
SIRPA-201ENST00000356025 PDE4AP27815 886 aa15.88■□□□□ 0.13
SIRPA-201ENST00000356025 PPP2R1AP30153 589 aa15.87■□□□□ 0.13
SIRPA-201ENST00000356025 SMG6Q86US8 1419 aaKnown RBP15.87■□□□□ 0.13
SIRPA-201ENST00000356025 SCAPERQ9BY12 1400 aa15.87■□□□□ 0.13
SIRPA-201ENST00000356025 CCDC141Q6ZP82 1450 aa15.86■□□□□ 0.13
SIRPA-201ENST00000356025 SRPK2P78362 688 aaKnown RBP15.86■□□□□ 0.13
SIRPA-201ENST00000356025 ARID4BQ4LE39 1312 aaPredicted RBP15.86■□□□□ 0.13
SIRPA-201ENST00000356025 NEFMP07197 916 aa15.86■□□□□ 0.13
SIRPA-201ENST00000356025 IPO9Q96P70 1041 aaKnown RBP15.86■□□□□ 0.13
SIRPA-201ENST00000356025 WASHC2CQ9Y4E1 1318 aa15.85■□□□□ 0.13
SIRPA-201ENST00000356025 PLEKHG5O94827 1062 aa15.84■□□□□ 0.13
SIRPA-201ENST00000356025 SLC12A5Q9H2X9 1139 aa15.84■□□□□ 0.13
SIRPA-201ENST00000356025 GCC2Q8IWJ2 1684 aa15.84■□□□□ 0.13
SIRPA-201ENST00000356025 U2AF1L5P0DN76 240 aaPredicted RBP15.83■□□□□ 0.13
SIRPA-201ENST00000356025 U2AF1Q01081 240 aaKnown RBP eCLIP15.83■□□□□ 0.13
SIRPA-201ENST00000356025 TESK2Q96S53 571 aa15.83■□□□□ 0.12
SIRPA-201ENST00000356025 POGKQ9P215 609 aa15.83■□□□□ 0.12
SIRPA-201ENST00000356025 ERBINQ96RT1 1412 aa15.82■□□□□ 0.12
SIRPA-201ENST00000356025 SYCP2Q9BX26 1530 aa15.82■□□□□ 0.12
SIRPA-201ENST00000356025 BCAR3O75815 825 aa15.82■□□□□ 0.12
SIRPA-201ENST00000356025 PDE3BQ13370 1112 aa15.82■□□□□ 0.12
SIRPA-201ENST00000356025 SLC24A1O60721 1099 aa15.81■□□□□ 0.12
SIRPA-201ENST00000356025 RAPGEF3O95398 923 aa15.8■□□□□ 0.12
SIRPA-201ENST00000356025 COG6Q9Y2V7 657 aa15.8■□□□□ 0.12
SIRPA-201ENST00000356025 ADGRF5Q8IZF2 1346 aa15.8■□□□□ 0.12
SIRPA-201ENST00000356025 SOX12O15370 315 aa15.8■□□□□ 0.12
SIRPA-201ENST00000356025 PER1O15534 1290 aaPredicted RBP15.8■□□□□ 0.12
SIRPA-201ENST00000356025 TCERG1O14776 1098 aaKnown RBP15.79■□□□□ 0.12
SIRPA-201ENST00000356025 SPRYD3Q8NCJ5 442 aa15.78■□□□□ 0.12
SIRPA-201ENST00000356025 NUP160Q12769 1436 aa15.78■□□□□ 0.12
SIRPA-201ENST00000356025 CABP2Q9NPB3 220 aa15.77■□□□□ 0.12
SIRPA-201ENST00000356025 TRAPPC8Q9Y2L5 1435 aa15.77■□□□□ 0.12
SIRPA-201ENST00000356025 PANK1Q8TE04 598 aa15.77■□□□□ 0.12
SIRPA-201ENST00000356025 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.77■□□□□ 0.12
SIRPA-201ENST00000356025 FAM135AQ9P2D6 1515 aa15.76■□□□□ 0.11
SIRPA-201ENST00000356025 CFAP53Q96M91 514 aa15.76■□□□□ 0.11
SIRPA-201ENST00000356025 RALGAPBQ86X10 1494 aa15.76■□□□□ 0.11
SIRPA-201ENST00000356025 MINK1Q8N4C8 1332 aaPredicted RBP15.76■□□□□ 0.11
SIRPA-201ENST00000356025 NUTM2FA1L443 756 aa15.76■□□□□ 0.11
SIRPA-201ENST00000356025 CYB5RLQ6IPT4 315 aa15.76■□□□□ 0.11
SIRPA-201ENST00000356025 EIF5BO60841 1220 aaKnown RBP15.75■□□□□ 0.11
SIRPA-201ENST00000356025 PRAG1Q86YV5 1406 aa15.75■□□□□ 0.11
SIRPA-201ENST00000356025 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.75■□□□□ 0.11
SIRPA-201ENST00000356025 FTSJ3Q8IY81 847 aaKnown RBP15.73■□□□□ 0.11
SIRPA-201ENST00000356025 ESF1Q9H501 851 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 272.4 ms