RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 NAP1L1P55209 391 aaKnown RBP14.24□□□□□ -0.13
NUDCD3-202ENST00000355451 NOL8Q76FK4 1167 aaKnown RBP14.23□□□□□ -0.13
NUDCD3-202ENST00000355451 ANKRD20A12PQ8NF67 263 aa14.23□□□□□ -0.13
NUDCD3-202ENST00000355451 CSRNP3Q8WYN3 585 aa14.22□□□□□ -0.13
NUDCD3-202ENST00000355451 B4GALNT3Q6L9W6 998 aa14.22□□□□□ -0.13
NUDCD3-202ENST00000355451 SLC4A10Q6U841 1118 aa14.22□□□□□ -0.13
NUDCD3-202ENST00000355451 HOMER1Q86YM7 354 aa14.22□□□□□ -0.13
NUDCD3-202ENST00000355451 RBM33Q96EV2 1170 aaKnown RBP14.22□□□□□ -0.13
NUDCD3-202ENST00000355451 IKQ13123 557 aaPredicted RBP14.22□□□□□ -0.13
NUDCD3-202ENST00000355451 ZRSR2Q15696 482 aaKnown RBP14.22□□□□□ -0.13
NUDCD3-202ENST00000355451 GZF1Q9H116 711 aaPredicted RBP14.22□□□□□ -0.13
NUDCD3-202ENST00000355451 FAM184AQ8NB25 1140 aa14.22□□□□□ -0.13
NUDCD3-202ENST00000355451 PHF14O94880 888 aa14.21□□□□□ -0.13
NUDCD3-202ENST00000355451 LTV1Q96GA3 475 aaPredicted RBP14.21□□□□□ -0.13
NUDCD3-202ENST00000355451 TRIM29Q14134 588 aa14.2□□□□□ -0.14
NUDCD3-202ENST00000355451 GOLGA6L19H0YKK7 550 aa14.2□□□□□ -0.14
NUDCD3-202ENST00000355451 EID1Q9Y6B2 187 aa14.2□□□□□ -0.14
NUDCD3-202ENST00000355451 TMEM87AQ8NBN3 555 aa14.2□□□□□ -0.14
NUDCD3-202ENST00000355451 ITPRIPQ8IWB1 547 aa14.19□□□□□ -0.14
NUDCD3-202ENST00000355451 MAP7D2Q96T17 732 aa14.19□□□□□ -0.14
NUDCD3-202ENST00000355451 RUFY1Q96T51 708 aa14.19□□□□□ -0.14
NUDCD3-202ENST00000355451 CFDP1Q9UEE9 299 aaPredicted RBP14.19□□□□□ -0.14
NUDCD3-202ENST00000355451 SLC4A3P48751 1232 aa14.19□□□□□ -0.14
NUDCD3-202ENST00000355451 NGDNQ8NEJ9 315 aaKnown RBP14.19□□□□□ -0.14
NUDCD3-202ENST00000355451 CDR1P51861 262 aa14.19□□□□□ -0.14
NUDCD3-202ENST00000355451 ERCC6Q03468 1493 aa14.18□□□□□ -0.14
NUDCD3-202ENST00000355451 LRRFIP1Q32MZ4 808 aaKnown RBP14.18□□□□□ -0.14
NUDCD3-202ENST00000355451 SUPT16HQ9Y5B9 1047 aaKnown RBP14.18□□□□□ -0.14
NUDCD3-202ENST00000355451 MCTP1Q6DN14 999 aa14.17□□□□□ -0.14
NUDCD3-202ENST00000355451 SEPT11Q9NVA2 429 aaKnown RBP14.17□□□□□ -0.14
NUDCD3-202ENST00000355451 AMPHP49418 695 aa14.17□□□□□ -0.14
NUDCD3-202ENST00000355451 IBSPP21815 317 aaPredicted RBP14.17□□□□□ -0.14
NUDCD3-202ENST00000355451 CCDC173Q0VFZ6 552 aa14.16□□□□□ -0.14
NUDCD3-202ENST00000355451 TMF1P82094 1093 aa14.15□□□□□ -0.14
NUDCD3-202ENST00000355451 NEFHP12036 1026 aa14.15□□□□□ -0.14
NUDCD3-202ENST00000355451 WASHC2AQ641Q2 1341 aa14.14□□□□□ -0.15
NUDCD3-202ENST00000355451 CPLX2Q6PUV4 134 aaKnown RBP14.14□□□□□ -0.15
NUDCD3-202ENST00000355451 NGEFQ8N5V2 710 aa14.14□□□□□ -0.15
NUDCD3-202ENST00000355451 HOOK1Q9UJC3 728 aaKnown RBP14.14□□□□□ -0.15
NUDCD3-202ENST00000355451 ERICH2A1L162 156 aa14.14□□□□□ -0.15
NUDCD3-202ENST00000355451 BECN2A8MW95 431 aa14.14□□□□□ -0.15
NUDCD3-202ENST00000355451 CHMP4CQ96CF2 233 aa14.13□□□□□ -0.15
NUDCD3-202ENST00000355451 GGT6Q6P531 493 aa14.13□□□□□ -0.15
NUDCD3-202ENST00000355451 C1orf141Q5JVX7 400 aa14.13□□□□□ -0.15
NUDCD3-202ENST00000355451 ANKRD62A6NC57 917 aa14.13□□□□□ -0.15
NUDCD3-202ENST00000355451 MAP3K9P80192 1104 aa14.13□□□□□ -0.15
NUDCD3-202ENST00000355451 CCDC191Q8NCU4 936 aa14.13□□□□□ -0.15
NUDCD3-202ENST00000355451 OFD1O75665 1012 aa14.12□□□□□ -0.15
NUDCD3-202ENST00000355451 NOP58Q9Y2X3 529 aaKnown RBP14.12□□□□□ -0.15
NUDCD3-202ENST00000355451 NEBLO76041 1014 aa14.12□□□□□ -0.15
NUDCD3-202ENST00000355451 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.12□□□□□ -0.15
NUDCD3-202ENST00000355451 FOXD4L5Q5VV16 416 aaPredicted RBP14.11□□□□□ -0.15
NUDCD3-202ENST00000355451 FOXD4L4Q8WXT5 416 aaPredicted RBP14.11□□□□□ -0.15
NUDCD3-202ENST00000355451 HMGN5P82970 282 aaKnown RBP14.11□□□□□ -0.15
NUDCD3-202ENST00000355451 PAXIP1Q6ZW49 1069 aaPredicted RBP14.1□□□□□ -0.15
NUDCD3-202ENST00000355451 NFXL1Q6ZNB6 911 aa14.1□□□□□ -0.15
NUDCD3-202ENST00000355451 MYO6Q9UM54 1294 aa14.1□□□□□ -0.15
NUDCD3-202ENST00000355451 RSF1Q96T23 1441 aaPredicted RBP14.1□□□□□ -0.15
NUDCD3-202ENST00000355451 FYB1O15117 783 aa14.09□□□□□ -0.15
NUDCD3-202ENST00000355451 SYCP1Q15431 976 aa14.09□□□□□ -0.15
NUDCD3-202ENST00000355451 U2AF1L5P0DN76 240 aaPredicted RBP14.09□□□□□ -0.15
NUDCD3-202ENST00000355451 U2AF1Q01081 240 aaKnown RBP eCLIP14.09□□□□□ -0.15
NUDCD3-202ENST00000355451 TTC5Q8N0Z6 440 aa14.09□□□□□ -0.15
NUDCD3-202ENST00000355451 DCTN1Q14203 1278 aa14.08□□□□□ -0.16
NUDCD3-202ENST00000355451 SEPT7Q16181 437 aaKnown RBP14.08□□□□□ -0.16
NUDCD3-202ENST00000355451 SMC4Q9NTJ3 1288 aa14.08□□□□□ -0.16
NUDCD3-202ENST00000355451 TRDNQ13061 729 aa14.08□□□□□ -0.16
NUDCD3-202ENST00000355451 HSP90AB4PQ58FF6 505 aa14.08□□□□□ -0.16
NUDCD3-202ENST00000355451 PLCD4Q9BRC7 762 aa14.08□□□□□ -0.16
NUDCD3-202ENST00000355451 ZNF592Q92610 1267 aa14.07□□□□□ -0.16
NUDCD3-202ENST00000355451 MTMR7Q9Y216 660 aa14.07□□□□□ -0.16
NUDCD3-202ENST00000355451 NUTM2FA1L443 756 aa14.07□□□□□ -0.16
NUDCD3-202ENST00000355451 ANKRD18AQ8IVF6 992 aa14.07□□□□□ -0.16
NUDCD3-202ENST00000355451 CCDC27Q2M243 656 aa14.06□□□□□ -0.16
NUDCD3-202ENST00000355451 CPLX1O14810 134 aa14.06□□□□□ -0.16
NUDCD3-202ENST00000355451 GRIPAP1Q4V328 841 aa14.06□□□□□ -0.16
NUDCD3-202ENST00000355451 SKIDA1Q1XH10 827 aa14.06□□□□□ -0.16
NUDCD3-202ENST00000355451 ST18O60284 1047 aa14.06□□□□□ -0.16
NUDCD3-202ENST00000355451 RILPL2Q969X0 211 aa14.06□□□□□ -0.16
NUDCD3-202ENST00000355451 FOXD4L1Q9NU39 408 aa14.05□□□□□ -0.16
NUDCD3-202ENST00000355451 PLCD3Q8N3E9 789 aa14.05□□□□□ -0.16
NUDCD3-202ENST00000355451 NEXNQ0ZGT2 675 aa14.05□□□□□ -0.16
NUDCD3-202ENST00000355451 TRIM21P19474 475 aaKnown RBP14.04□□□□□ -0.16
NUDCD3-202ENST00000355451 TEX35Q5T0J7 233 aa14.04□□□□□ -0.16
NUDCD3-202ENST00000355451 MFAP1P55081 439 aaKnown RBP14.04□□□□□ -0.16
NUDCD3-202ENST00000355451 SLKQ9H2G2 1235 aaPredicted RBP14.04□□□□□ -0.16
NUDCD3-202ENST00000355451 TCERG1O14776 1098 aaKnown RBP14.04□□□□□ -0.16
NUDCD3-202ENST00000355451 MYCNP04198 464 aaPredicted RBP14.03□□□□□ -0.16
NUDCD3-202ENST00000355451 FOXD4L6Q3SYB3 417 aaPredicted RBP14.03□□□□□ -0.16
NUDCD3-202ENST00000355451 FOXD4L3Q6VB84 417 aaPredicted RBP14.03□□□□□ -0.16
NUDCD3-202ENST00000355451 DCAF11Q8TEB1 546 aa14.03□□□□□ -0.16
NUDCD3-202ENST00000355451 RWDD1Q9H446 243 aaPredicted RBP14.03□□□□□ -0.16
NUDCD3-202ENST00000355451 WDHD1O75717 1129 aaPredicted RBP14.03□□□□□ -0.16
NUDCD3-202ENST00000355451 MPHOSPH10O00566 681 aaKnown RBP14.02□□□□□ -0.16
NUDCD3-202ENST00000355451 DESP17661 470 aa14.01□□□□□ -0.17
NUDCD3-202ENST00000355451 CCDC180Q9P1Z9 1646 aa14.01□□□□□ -0.17
NUDCD3-202ENST00000355451 ZNF771Q7L3S4 317 aaPredicted RBP14.01□□□□□ -0.17
NUDCD3-202ENST00000355451 MATR3P43243 847 aaKnown RBP eCLIP14.01□□□□□ -0.175e-6■■■□□ 17.3
NUDCD3-202ENST00000355451 BRMS1Q9HCU9 246 aa14.01□□□□□ -0.17
NUDCD3-202ENST00000355451 EZRP15311 586 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms