RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 ZNF644Q9H582 1327 aaPredicted RBP15.76■□□□□ 0.11
COLCA1-201ENST00000355430 PDE4AP27815 886 aa15.76■□□□□ 0.11
COLCA1-201ENST00000355430 TRIM44Q96DX7 344 aaPredicted RBP15.76■□□□□ 0.11
COLCA1-201ENST00000355430 TERF2IPQ9NYB0 399 aa15.75■□□□□ 0.11
COLCA1-201ENST00000355430 SPRYD3Q8NCJ5 442 aa15.74■□□□□ 0.11
COLCA1-201ENST00000355430 CCDC146Q8IYE0 955 aa15.74■□□□□ 0.11
COLCA1-201ENST00000355430 RTF1Q92541 710 aaKnown RBP15.73■□□□□ 0.11
COLCA1-201ENST00000355430 POGZQ7Z3K3 1410 aa15.73■□□□□ 0.11
COLCA1-201ENST00000355430 GOLGA2Q08379 1002 aa15.72■□□□□ 0.11
COLCA1-201ENST00000355430 EFCAB5A4FU69 1503 aa15.72■□□□□ 0.11
COLCA1-201ENST00000355430 PANK3Q9H999 370 aa15.72■□□□□ 0.11
COLCA1-201ENST00000355430 HFM1A2PYH4 1435 aa15.72■□□□□ 0.11
COLCA1-201ENST00000355430 CCDC184Q52MB2 194 aa15.71■□□□□ 0.11
COLCA1-201ENST00000355430 CRBNQ96SW2 442 aa15.71■□□□□ 0.11
COLCA1-201ENST00000355430 GOLGA6L22H0YM25 854 aa15.71■□□□□ 0.1
COLCA1-201ENST00000355430 PCF11O94913 1555 aaKnown RBP15.71■□□□□ 0.1
COLCA1-201ENST00000355430 NCLP19338 710 aaKnown RBP15.7■□□□□ 0.1
COLCA1-201ENST00000355430 ARHGAP5Q13017 1502 aa15.7■□□□□ 0.1
COLCA1-201ENST00000355430 CCDC144AA2RUR9 1427 aa15.7■□□□□ 0.1
COLCA1-201ENST00000355430 ATF3P18847 181 aa15.68■□□□□ 0.1
COLCA1-201ENST00000355430 NAP1L5Q96NT1 182 aaPredicted RBP15.68■□□□□ 0.1
COLCA1-201ENST00000355430 SLKQ9H2G2 1235 aaPredicted RBP15.68■□□□□ 0.1
COLCA1-201ENST00000355430 SLC4A3P48751 1232 aa15.68■□□□□ 0.1
COLCA1-201ENST00000355430 MS4A1P11836 297 aa15.68■□□□□ 0.1
COLCA1-201ENST00000355430 HSP90AB1P08238 724 aaKnown RBP15.67■□□□□ 0.1
COLCA1-201ENST00000355430 NBPF8Q3BBV2 869 aa15.67■□□□□ 0.1
COLCA1-201ENST00000355430 EHBP1L1Q8N3D4 1523 aa15.66■□□□□ 0.1
COLCA1-201ENST00000355430 TMX4Q9H1E5 349 aaPredicted RBP15.66■□□□□ 0.1
COLCA1-201ENST00000355430 NUTM2FA1L443 756 aa15.66■□□□□ 0.1
COLCA1-201ENST00000355430 HSCBQ8IWL3 235 aa15.65■□□□□ 0.1
COLCA1-201ENST00000355430 AKNAQ7Z591 1439 aa15.65■□□□□ 0.1
COLCA1-201ENST00000355430 EVA1CP58658 441 aa15.65■□□□□ 0.1
COLCA1-201ENST00000355430 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.64■□□□□ 0.09
COLCA1-201ENST00000355430 L1TD1Q5T7N2 865 aaKnown RBP15.64■□□□□ 0.09
COLCA1-201ENST00000355430 CENPQQ7L2Z9 268 aaPredicted RBP15.63■□□□□ 0.09
COLCA1-201ENST00000355430 CHMP4BQ9H444 224 aaKnown RBP15.63■□□□□ 0.09
COLCA1-201ENST00000355430 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.63■□□□□ 0.09
COLCA1-201ENST00000355430 BIVM-ERCC5R4GMW8 1640 aa15.63■□□□□ 0.09
COLCA1-201ENST00000355430 AMPHP49418 695 aa15.63■□□□□ 0.09
COLCA1-201ENST00000355430 CHMP4AQ9BY43 222 aa15.63■□□□□ 0.09
COLCA1-201ENST00000355430 UNC13AQ9UPW8 1703 aa15.63■□□□□ 0.09
COLCA1-201ENST00000355430 USP35Q9P2H5 1018 aa15.62■□□□□ 0.09
COLCA1-201ENST00000355430 TRAK1Q9UPV9 953 aa15.62■□□□□ 0.09
COLCA1-201ENST00000355430 MAGI1Q96QZ7 1491 aaPredicted RBP15.62■□□□□ 0.09
COLCA1-201ENST00000355430 PEG3Q9GZU2 1588 aa15.62■□□□□ 0.09
COLCA1-201ENST00000355430 NAIPQ13075 1403 aa15.62■□□□□ 0.09
COLCA1-201ENST00000355430 SUPT6HQ7KZ85 1726 aaKnown RBP15.61■□□□□ 0.09
COLCA1-201ENST00000355430 MAPKBP1O60336 1514 aa15.61■□□□□ 0.09
COLCA1-201ENST00000355430 MAP3K1Q13233 1512 aa15.61■□□□□ 0.09
COLCA1-201ENST00000355430 PLEKHH2Q8IVE3 1493 aa15.61■□□□□ 0.09
COLCA1-201ENST00000355430 FAM161AQ3B820 660 aa15.61■□□□□ 0.09
COLCA1-201ENST00000355430 CENPJQ9HC77 1338 aaPredicted RBP15.61■□□□□ 0.09
COLCA1-201ENST00000355430 RWDD1Q9H446 243 aaPredicted RBP15.6■□□□□ 0.09
COLCA1-201ENST00000355430 THEMISQ8N1K5 641 aaPredicted RBP15.6■□□□□ 0.09
COLCA1-201ENST00000355430 KIAA0586Q9BVV6 1533 aa15.6■□□□□ 0.09
COLCA1-201ENST00000355430 MSH5O43196 834 aa15.6■□□□□ 0.09
COLCA1-201ENST00000355430 U2AF1L5P0DN76 240 aaPredicted RBP15.6■□□□□ 0.09
COLCA1-201ENST00000355430 U2AF1Q01081 240 aaKnown RBP eCLIP15.6■□□□□ 0.09
COLCA1-201ENST00000355430 CASC1Q6TDU7 716 aa15.6■□□□□ 0.09
COLCA1-201ENST00000355430 AFAP1Q8N556 730 aa15.59■□□□□ 0.09
COLCA1-201ENST00000355430 PMFBP1Q8TBY8 1022 aa15.59■□□□□ 0.09
COLCA1-201ENST00000355430 GZF1Q9H116 711 aaPredicted RBP15.59■□□□□ 0.09
COLCA1-201ENST00000355430 CLUAP1Q96AJ1 413 aa15.58■□□□□ 0.09
COLCA1-201ENST00000355430 CALD1Q05682 793 aaKnown RBP15.58■□□□□ 0.08
COLCA1-201ENST00000355430 ITPRIPQ8IWB1 547 aa15.58■□□□□ 0.08
COLCA1-201ENST00000355430 BRD4O60885 1362 aaPredicted RBP15.57■□□□□ 0.08
COLCA1-201ENST00000355430 PSME1Q06323 249 aa15.57■□□□□ 0.08
COLCA1-201ENST00000355430 OS9Q13438 667 aaPredicted RBP15.57■□□□□ 0.08
COLCA1-201ENST00000355430 ZNF330Q9Y3S2 320 aaPredicted RBP15.57■□□□□ 0.08
COLCA1-201ENST00000355430 ANKRD50Q9ULJ7 1429 aa15.57■□□□□ 0.08
COLCA1-201ENST00000355430 PHF23Q9BUL5 403 aaPredicted RBP15.57■□□□□ 0.08
COLCA1-201ENST00000355430 RRP7AQ9Y3A4 280 aaKnown RBP15.56■□□□□ 0.08
COLCA1-201ENST00000355430 EVC2Q86UK5 1308 aa15.56■□□□□ 0.08
COLCA1-201ENST00000355430 ABCA10Q8WWZ4 1543 aa15.56■□□□□ 0.08
COLCA1-201ENST00000355430 MFAP1P55081 439 aaKnown RBP15.56■□□□□ 0.08
COLCA1-201ENST00000355430 SMG6Q86US8 1419 aaKnown RBP15.55■□□□□ 0.08
COLCA1-201ENST00000355430 GSE1Q14687 1217 aa15.55■□□□□ 0.08
COLCA1-201ENST00000355430 MIA2Q96PC5 1412 aa15.55■□□□□ 0.08
COLCA1-201ENST00000355430 TPRNQ4KMQ1 711 aa15.55■□□□□ 0.08
COLCA1-201ENST00000355430 CDCA7LQ96GN5 454 aa15.55■□□□□ 0.08
COLCA1-201ENST00000355430 C11orf95C9JLR9 678 aaPredicted RBP15.54■□□□□ 0.08
COLCA1-201ENST00000355430 TXNDC2Q86VQ3 553 aa15.54■□□□□ 0.08
COLCA1-201ENST00000355430 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.54■□□□□ 0.08
COLCA1-201ENST00000355430 HECW1Q76N89 1606 aa15.54■□□□□ 0.08
COLCA1-201ENST00000355430 PROSER2Q86WR7 435 aaPredicted RBP15.53■□□□□ 0.08
COLCA1-201ENST00000355430 LTV1Q96GA3 475 aaPredicted RBP15.53■□□□□ 0.08
COLCA1-201ENST00000355430 APAF1O14727 1248 aa15.53■□□□□ 0.08
COLCA1-201ENST00000355430 PTMAP06454 111 aaKnown RBP15.53■□□□□ 0.08
COLCA1-201ENST00000355430 STAC3Q96MF2 364 aa15.52■□□□□ 0.08
COLCA1-201ENST00000355430 SMC4Q9NTJ3 1288 aa15.52■□□□□ 0.08
COLCA1-201ENST00000355430 PTPN23Q9H3S7 1636 aa15.52■□□□□ 0.07
COLCA1-201ENST00000355430 DAPK1P53355 1430 aa15.52■□□□□ 0.07
COLCA1-201ENST00000355430 PNISRQ8TF01 805 aaKnown RBP15.52■□□□□ 0.07
COLCA1-201ENST00000355430 COG3Q96JB2 828 aa15.51■□□□□ 0.07
COLCA1-201ENST00000355430 E9PSI1 815 aa15.51■□□□□ 0.07
COLCA1-201ENST00000355430 RAPGEF3O95398 923 aa15.51■□□□□ 0.07
COLCA1-201ENST00000355430 ANKLE2Q86XL3 938 aa15.51■□□□□ 0.07
COLCA1-201ENST00000355430 KIAA1107Q9UPP5 1409 aa15.51■□□□□ 0.07
COLCA1-201ENST00000355430 BCL2L13Q9BXK5 485 aa15.51■□□□□ 0.07
COLCA1-201ENST00000355430 MINK1Q8N4C8 1332 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms