RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 SCAPERQ9BY12 1400 aa9.84□□□□□ -0.83
TRIM55-203ENST00000350034 NBPF8Q3BBV2 869 aa9.84□□□□□ -0.83
TRIM55-203ENST00000350034 CERKQ8TCT0 537 aa9.84□□□□□ -0.83
TRIM55-203ENST00000350034 IQGAP3Q86VI3 1631 aa9.84□□□□□ -0.83
TRIM55-203ENST00000350034 INO80Q9ULG1 1556 aaPredicted RBP9.84□□□□□ -0.83
TRIM55-203ENST00000350034 ATP10AO60312 1499 aa9.83□□□□□ -0.84
TRIM55-203ENST00000350034 PLA2R1Q13018 1463 aa9.83□□□□□ -0.84
TRIM55-203ENST00000350034 UHRF1BP1Q6BDS2 1440 aa9.82□□□□□ -0.84
TRIM55-203ENST00000350034 CD109Q6YHK3 1445 aa9.82□□□□□ -0.84
TRIM55-203ENST00000350034 ATP7AQ04656 1500 aa9.82□□□□□ -0.84
TRIM55-203ENST00000350034 SPATA31E1Q6ZUB1 1445 aa9.81□□□□□ -0.84
TRIM55-203ENST00000350034 DHX29Q7Z478 1369 aaKnown RBP9.8□□□□□ -0.84
TRIM55-203ENST00000350034 MSH5O43196 834 aa9.8□□□□□ -0.84
TRIM55-203ENST00000350034 HSPA5P11021 654 aaKnown RBP9.8□□□□□ -0.84
TRIM55-203ENST00000350034 DIP2BQ9P265 1576 aa9.8□□□□□ -0.84
TRIM55-203ENST00000350034 NEO1Q92859 1461 aa9.79□□□□□ -0.84
TRIM55-203ENST00000350034 EIF4G2P78344 907 aaKnown RBP eCLIP9.79□□□□□ -0.84
TRIM55-203ENST00000350034 POGZQ7Z3K3 1410 aa9.79□□□□□ -0.84
TRIM55-203ENST00000350034 KDM5CP41229 1560 aa9.79□□□□□ -0.84
TRIM55-203ENST00000350034 VWDEQ8N2E2 1590 aa9.79□□□□□ -0.84
TRIM55-203ENST00000350034 CFAP74Q9C0B2 1584 aa9.79□□□□□ -0.84
TRIM55-203ENST00000350034 ZNF518AQ6AHZ1 1483 aa9.79□□□□□ -0.84
TRIM55-203ENST00000350034 DEPDC5O75140 1603 aa9.78□□□□□ -0.84
TRIM55-203ENST00000350034 DDX10Q13206 875 aaKnown RBP9.78□□□□□ -0.84
TRIM55-203ENST00000350034 HIRIP3Q9BW71 556 aaPredicted RBP9.78□□□□□ -0.84
TRIM55-203ENST00000350034 GLI2P10070 1586 aa9.78□□□□□ -0.84
TRIM55-203ENST00000350034 MLH3Q9UHC1 1453 aa9.78□□□□□ -0.84
TRIM55-203ENST00000350034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.77□□□□□ -0.85
TRIM55-203ENST00000350034 EIF2AK4Q9P2K8 1649 aaKnown RBP9.77□□□□□ -0.85
TRIM55-203ENST00000350034 RALGAPBQ86X10 1494 aa9.77□□□□□ -0.85
TRIM55-203ENST00000350034 CCDC144AA2RUR9 1427 aa9.76□□□□□ -0.85
TRIM55-203ENST00000350034 PTPRTO14522 1441 aa9.76□□□□□ -0.85
TRIM55-203ENST00000350034 KIDINS220Q9ULH0 1771 aa9.75□□□□□ -0.85
TRIM55-203ENST00000350034 PRDM15P57071 1507 aaPredicted RBP9.75□□□□□ -0.85
TRIM55-203ENST00000350034 WASHC2AQ641Q2 1341 aa9.75□□□□□ -0.85
TRIM55-203ENST00000350034 MROH1Q8NDA8 1641 aa9.74□□□□□ -0.85
TRIM55-203ENST00000350034 CENPBP07199 599 aaPredicted RBP9.74□□□□□ -0.85
TRIM55-203ENST00000350034 MAP3K4Q9Y6R4 1608 aa9.74□□□□□ -0.85
TRIM55-203ENST00000350034 A2MP01023 1474 aa9.73□□□□□ -0.85
TRIM55-203ENST00000350034 LMTK2Q8IWU2 1503 aa9.73□□□□□ -0.85
TRIM55-203ENST00000350034 KIF3BO15066 747 aa9.73□□□□□ -0.85
TRIM55-203ENST00000350034 FAM69CQ0P6D2 419 aa9.73□□□□□ -0.85
TRIM55-203ENST00000350034 TET3O43151 1660 aa9.73□□□□□ -0.85
TRIM55-203ENST00000350034 KANK1Q14678 1352 aa9.73□□□□□ -0.85
TRIM55-203ENST00000350034 CCDC7Q96M83 1385 aa9.73□□□□□ -0.85
TRIM55-203ENST00000350034 C11orf95C9JLR9 678 aaPredicted RBP9.72□□□□□ -0.85
TRIM55-203ENST00000350034 PRAG1Q86YV5 1406 aa9.72□□□□□ -0.85
TRIM55-203ENST00000350034 TRPM2O94759 1503 aa9.72□□□□□ -0.85
TRIM55-203ENST00000350034 FRMPD1Q5SYB0 1578 aa9.71□□□□□ -0.85
TRIM55-203ENST00000350034 RNF17Q9BXT8 1623 aaKnown RBP9.71□□□□□ -0.85
TRIM55-203ENST00000350034 E9PCH4 1651 aa9.71□□□□□ -0.85
TRIM55-203ENST00000350034 CCER2I3L3R5 266 aa9.71□□□□□ -0.86
TRIM55-203ENST00000350034 DCAF11Q8TEB1 546 aa9.71□□□□□ -0.86
TRIM55-203ENST00000350034 GPRASP1Q5JY77 1395 aa9.71□□□□□ -0.86
TRIM55-203ENST00000350034 USP47Q96K76 1375 aa9.71□□□□□ -0.86
TRIM55-203ENST00000350034 BCORL1Q5H9F3 1711 aa9.7□□□□□ -0.86
TRIM55-203ENST00000350034 NEURL4Q96JN8 1562 aa9.7□□□□□ -0.86
TRIM55-203ENST00000350034 ARID4BQ4LE39 1312 aaPredicted RBP9.69□□□□□ -0.86
TRIM55-203ENST00000350034 STAC3Q96MF2 364 aa9.69□□□□□ -0.86
TRIM55-203ENST00000350034 CNTLNQ9NXG0 1405 aa9.68□□□□□ -0.86
TRIM55-203ENST00000350034 KIF7Q2M1P5 1343 aa9.68□□□□□ -0.86
TRIM55-203ENST00000350034 ANP32CO43423 234 aa9.68□□□□□ -0.86
TRIM55-203ENST00000350034 MYT1LQ9UL68 1186 aa9.68□□□□□ -0.86
TRIM55-203ENST00000350034 KDM2AQ9Y2K7 1162 aa9.68□□□□□ -0.86
TRIM55-203ENST00000350034 ABCA6Q8N139 1617 aa9.67□□□□□ -0.86
TRIM55-203ENST00000350034 EFCAB6Q5THR3 1501 aa9.67□□□□□ -0.86
TRIM55-203ENST00000350034 RAPGEF3O95398 923 aa9.67□□□□□ -0.86
TRIM55-203ENST00000350034 ZNF326Q5BKZ1 582 aaKnown RBP9.67□□□□□ -0.86
TRIM55-203ENST00000350034 CARD11Q9BXL7 1154 aa9.67□□□□□ -0.86
TRIM55-203ENST00000350034 TSPOAP1O95153 1857 aa9.67□□□□□ -0.86
TRIM55-203ENST00000350034 TRPM1Q7Z4N2 1603 aa9.67□□□□□ -0.86
TRIM55-203ENST00000350034 DIP2CQ9Y2E4 1556 aa9.67□□□□□ -0.86
TRIM55-203ENST00000350034 ZMYM4Q5VZL5 1548 aa9.66□□□□□ -0.86
TRIM55-203ENST00000350034 SPHKAPQ2M3C7 1700 aa9.66□□□□□ -0.86
TRIM55-203ENST00000350034 RICTORQ6R327 1708 aa9.66□□□□□ -0.86
TRIM55-203ENST00000350034 RGL3Q3MIN7 710 aa9.66□□□□□ -0.86
TRIM55-203ENST00000350034 YTHDC1Q96MU7 727 aaKnown RBP9.66□□□□□ -0.86
TRIM55-203ENST00000350034 LAMC1P11047 1609 aa9.66□□□□□ -0.86
TRIM55-203ENST00000350034 CLTCL1P53675 1640 aa9.66□□□□□ -0.86
TRIM55-203ENST00000350034 PPRC1Q5VV67 1664 aaKnown RBP9.64□□□□□ -0.87
TRIM55-203ENST00000350034 ROCK2O75116 1388 aaKnown RBP9.64□□□□□ -0.87
TRIM55-203ENST00000350034 SCAF1Q9H7N4 1312 aaKnown RBP9.64□□□□□ -0.87
TRIM55-203ENST00000350034 MED1Q15648 1581 aaPredicted RBP9.64□□□□□ -0.87
TRIM55-203ENST00000350034 ABCC3O15438 1527 aa9.64□□□□□ -0.87
TRIM55-203ENST00000350034 POLR1AO95602 1720 aaPredicted RBP9.64□□□□□ -0.87
TRIM55-203ENST00000350034 NPATQ14207 1427 aa9.64□□□□□ -0.87
TRIM55-203ENST00000350034 YEATS2Q9ULM3 1422 aa9.64□□□□□ -0.87
TRIM55-203ENST00000350034 NBPF1Q3BBV0 1214 aa9.63□□□□□ -0.87
TRIM55-203ENST00000350034 CEP152O94986 1710 aa9.62□□□□□ -0.87
TRIM55-203ENST00000350034 ST20-MTHFSA0A0A6YYL1 179 aa9.62□□□□□ -0.87
TRIM55-203ENST00000350034 MADDQ8WXG6 1647 aa9.62□□□□□ -0.87
TRIM55-203ENST00000350034 NOS1P29475 1434 aa9.62□□□□□ -0.87
TRIM55-203ENST00000350034 ARHGAP31Q2M1Z3 1444 aa9.62□□□□□ -0.87
TRIM55-203ENST00000350034 MYOM2P54296 1465 aa9.61□□□□□ -0.87
TRIM55-203ENST00000350034 REREQ9P2R6 1566 aa9.61□□□□□ -0.87
TRIM55-203ENST00000350034 NRXN1Q9ULB1 1477 aa9.6□□□□□ -0.87
TRIM55-203ENST00000350034 GGT6Q6P531 493 aa9.6□□□□□ -0.87
TRIM55-203ENST00000350034 TESK2Q96S53 571 aa9.6□□□□□ -0.87
TRIM55-203ENST00000350034 ADGRB3O60242 1522 aa9.6□□□□□ -0.87
TRIM55-203ENST00000350034 AGLP35573 1532 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms