RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 CANXP27824 592 aaKnown RBP13.78□□□□□ -0.2
CAPN3-203ENST00000349748 PTPRKQ15262 1439 aa13.78□□□□□ -0.2
CAPN3-203ENST00000349748 UGGT2Q9NYU1 1516 aa13.78□□□□□ -0.2
CAPN3-203ENST00000349748 FYCO1Q9BQS8 1478 aa13.77□□□□□ -0.2
CAPN3-203ENST00000349748 RIPK4P57078 832 aa13.77□□□□□ -0.21
CAPN3-203ENST00000349748 CCDC7Q96M83 1385 aa13.77□□□□□ -0.21
CAPN3-203ENST00000349748 FAM161AQ3B820 660 aa13.77□□□□□ -0.21
CAPN3-203ENST00000349748 CASKIN1Q8WXD9 1431 aa13.76□□□□□ -0.21
CAPN3-203ENST00000349748 FGD6Q6ZV73 1430 aa13.75□□□□□ -0.21
CAPN3-203ENST00000349748 PTPRGP23470 1445 aa13.75□□□□□ -0.21
CAPN3-203ENST00000349748 ERCC6L2Q5T890 1561 aa13.75□□□□□ -0.21
CAPN3-203ENST00000349748 FOXD1Q16676 465 aa13.75□□□□□ -0.21
CAPN3-203ENST00000349748 MYH16Q9H6N6 1097 aa13.75□□□□□ -0.21
CAPN3-203ENST00000349748 CCDC18Q5T9S5 1454 aa13.75□□□□□ -0.21
CAPN3-203ENST00000349748 SAMD9Q5K651 1589 aa13.75□□□□□ -0.21
CAPN3-203ENST00000349748 SMAP1Q8IYB5 467 aaPredicted RBP13.74□□□□□ -0.21
CAPN3-203ENST00000349748 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.74□□□□□ -0.21
CAPN3-203ENST00000349748 CYB5RLQ6IPT4 315 aa13.74□□□□□ -0.21
CAPN3-203ENST00000349748 CRBNQ96SW2 442 aa13.74□□□□□ -0.21
CAPN3-203ENST00000349748 CLASP1Q7Z460 1538 aa13.73□□□□□ -0.21
CAPN3-203ENST00000349748 PLB1Q6P1J6 1458 aa13.73□□□□□ -0.21
CAPN3-203ENST00000349748 KIAA0556O60303 1618 aa13.73□□□□□ -0.21
CAPN3-203ENST00000349748 TRIM44Q96DX7 344 aaPredicted RBP13.71□□□□□ -0.21
CAPN3-203ENST00000349748 KDM5BQ9UGL1 1544 aa13.71□□□□□ -0.21
CAPN3-203ENST00000349748 PLCD3Q8N3E9 789 aa13.71□□□□□ -0.21
CAPN3-203ENST00000349748 MTUS2Q5JR59 1369 aa13.71□□□□□ -0.22
CAPN3-203ENST00000349748 PTPN23Q9H3S7 1636 aa13.71□□□□□ -0.22
CAPN3-203ENST00000349748 VGLL3A8MV65 326 aa13.71□□□□□ -0.22
CAPN3-203ENST00000349748 MRE11P49959 708 aa13.7□□□□□ -0.22
CAPN3-203ENST00000349748 HFM1A2PYH4 1435 aa13.7□□□□□ -0.22
CAPN3-203ENST00000349748 LRRIQ1Q96JM4 1722 aa13.69□□□□□ -0.22
CAPN3-203ENST00000349748 NCOA1Q15788 1441 aa13.69□□□□□ -0.22
CAPN3-203ENST00000349748 UACAQ9BZF9 1416 aa13.69□□□□□ -0.22
CAPN3-203ENST00000349748 IPO4Q8TEX9 1081 aaKnown RBP13.69□□□□□ -0.22
CAPN3-203ENST00000349748 PNISRQ8TF01 805 aaKnown RBP13.69□□□□□ -0.22
CAPN3-203ENST00000349748 GRPEL1Q9HAV7 217 aa13.69□□□□□ -0.22
CAPN3-203ENST00000349748 DNAJC5Q9H3Z4 198 aa13.68□□□□□ -0.22
CAPN3-203ENST00000349748 KIF7Q2M1P5 1343 aa13.68□□□□□ -0.22
CAPN3-203ENST00000349748 NAIPQ13075 1403 aa13.68□□□□□ -0.22
CAPN3-203ENST00000349748 CDK13Q14004 1512 aaKnown RBP13.67□□□□□ -0.22
CAPN3-203ENST00000349748 POLR3GLQ9BT43 218 aa13.67□□□□□ -0.22
CAPN3-203ENST00000349748 KTN1Q86UP2 1357 aaKnown RBP13.67□□□□□ -0.22
CAPN3-203ENST00000349748 ANTXR1Q9H6X2 564 aa13.67□□□□□ -0.22
CAPN3-203ENST00000349748 ARHGEF11O15085 1522 aa13.67□□□□□ -0.22
CAPN3-203ENST00000349748 C20orf194Q5TEA3 1177 aa13.66□□□□□ -0.22
CAPN3-203ENST00000349748 SPRYD3Q8NCJ5 442 aa13.66□□□□□ -0.22
CAPN3-203ENST00000349748 TMEM51Q9NW97 253 aa13.66□□□□□ -0.22
CAPN3-203ENST00000349748 TMC1Q8TDI8 760 aa13.65□□□□□ -0.22
CAPN3-203ENST00000349748 KDM2BQ8NHM5 1336 aa13.65□□□□□ -0.22
CAPN3-203ENST00000349748 DMTNQ08495 405 aa13.65□□□□□ -0.22
CAPN3-203ENST00000349748 PPP4R3BQ5MIZ7 849 aa13.65□□□□□ -0.22
CAPN3-203ENST00000349748 KLHL34Q8N239 644 aa13.65□□□□□ -0.22
CAPN3-203ENST00000349748 CDCA7LQ96GN5 454 aa13.65□□□□□ -0.22
CAPN3-203ENST00000349748 ZNF830Q96NB3 372 aaPredicted RBP13.65□□□□□ -0.22
CAPN3-203ENST00000349748 MAP7D2Q96T17 732 aa13.65□□□□□ -0.22
CAPN3-203ENST00000349748 USP19O94966 1318 aa13.65□□□□□ -0.22
CAPN3-203ENST00000349748 MCM4P33991 863 aa13.64□□□□□ -0.23
CAPN3-203ENST00000349748 R3HCC1Q9Y3T6 440 aaKnown RBP13.64□□□□□ -0.23
CAPN3-203ENST00000349748 TRAK2O60296 914 aa13.64□□□□□ -0.23
CAPN3-203ENST00000349748 PLPPR3Q6T4P5 718 aa13.64□□□□□ -0.23
CAPN3-203ENST00000349748 EPRSP07814 1512 aaKnown RBP13.63□□□□□ -0.23
CAPN3-203ENST00000349748 NUP153P49790 1475 aaKnown RBP13.63□□□□□ -0.23
CAPN3-203ENST00000349748 OFD1O75665 1012 aa13.62□□□□□ -0.23
CAPN3-203ENST00000349748 SEC24BO95487 1268 aa13.62□□□□□ -0.23
CAPN3-203ENST00000349748 BECN1Q14457 450 aa13.62□□□□□ -0.23
CAPN3-203ENST00000349748 AMER1Q5JTC6 1135 aaPredicted RBP13.62□□□□□ -0.23
CAPN3-203ENST00000349748 MYOM3Q5VTT5 1437 aa13.62□□□□□ -0.23
CAPN3-203ENST00000349748 PLEKHD1A6NEE1 506 aa13.62□□□□□ -0.23
CAPN3-203ENST00000349748 ZSCAN20P17040 1043 aaPredicted RBP13.62□□□□□ -0.23
CAPN3-203ENST00000349748 ANP32BQ92688 251 aaKnown RBP13.62□□□□□ -0.23
CAPN3-203ENST00000349748 SHROOM2Q13796 1616 aa13.62□□□□□ -0.23
CAPN3-203ENST00000349748 DENND4BO75064 1496 aaPredicted RBP13.61□□□□□ -0.23
CAPN3-203ENST00000349748 UTP14CQ5TAP6 766 aaKnown RBP13.61□□□□□ -0.23
CAPN3-203ENST00000349748 RRP7BPQ9NSQ0 103 aa13.61□□□□□ -0.23
CAPN3-203ENST00000349748 CENPQQ7L2Z9 268 aaPredicted RBP13.6□□□□□ -0.23
CAPN3-203ENST00000349748 RIMBP3CA6NJZ7 1639 aa13.6□□□□□ -0.23
CAPN3-203ENST00000349748 RIMBP3BA6NNM3 1639 aa13.6□□□□□ -0.23
CAPN3-203ENST00000349748 RIMBP3Q9UFD9 1639 aa13.6□□□□□ -0.23
CAPN3-203ENST00000349748 DHX29Q7Z478 1369 aaKnown RBP13.6□□□□□ -0.23
CAPN3-203ENST00000349748 CHIC2Q9UKJ5 165 aa13.6□□□□□ -0.23
CAPN3-203ENST00000349748 MAGI3Q5TCQ9 1506 aa13.59□□□□□ -0.23
CAPN3-203ENST00000349748 UQCRHLA0A096LP55 91 aa13.59□□□□□ -0.23
CAPN3-203ENST00000349748 UQCRHP07919 91 aa13.59□□□□□ -0.23
CAPN3-203ENST00000349748 GAS2L3Q86XJ1 694 aa13.59□□□□□ -0.23
CAPN3-203ENST00000349748 KDM6BO15054 1643 aa13.58□□□□□ -0.24
CAPN3-203ENST00000349748 HECW1Q76N89 1606 aa13.58□□□□□ -0.24
CAPN3-203ENST00000349748 RAPGEF6Q8TEU7 1601 aa13.58□□□□□ -0.24
CAPN3-203ENST00000349748 NCLP19338 710 aaKnown RBP13.58□□□□□ -0.24
CAPN3-203ENST00000349748 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.58□□□□□ -0.24
CAPN3-203ENST00000349748 RSPH4AQ5TD94 716 aa13.57□□□□□ -0.24
CAPN3-203ENST00000349748 ZNF777Q9ULD5 760 aaPredicted RBP13.57□□□□□ -0.24
CAPN3-203ENST00000349748 ZBTB22O15209 634 aa13.57□□□□□ -0.24
CAPN3-203ENST00000349748 SUPT6HQ7KZ85 1726 aaKnown RBP13.57□□□□□ -0.24
CAPN3-203ENST00000349748 L3MBTL2Q969R5 705 aa13.56□□□□□ -0.24
CAPN3-203ENST00000349748 ATP10BO94823 1461 aa13.56□□□□□ -0.24
CAPN3-203ENST00000349748 MAPK8IP2Q13387 824 aaPredicted RBP13.56□□□□□ -0.24
CAPN3-203ENST00000349748 ZSCAN30Q86W11 494 aa13.56□□□□□ -0.24
CAPN3-203ENST00000349748 NPM1P06748 294 aaKnown RBP eCLIP13.55□□□□□ -0.24
CAPN3-203ENST00000349748 TBC1D2Q9BYX2 928 aa13.55□□□□□ -0.24
CAPN3-203ENST00000349748 EHBP1L1Q8N3D4 1523 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms