RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 KIF15Q9NS87 1388 aa23.41■■□□□ 1.34
UBE3C-201ENST00000348165 PMFBP1Q8TBY8 1022 aa23.41■■□□□ 1.34
UBE3C-201ENST00000348165 PDE3BQ13370 1112 aa23.41■■□□□ 1.34
UBE3C-201ENST00000348165 LMOD3Q0VAK6 560 aa23.4■■□□□ 1.34
UBE3C-201ENST00000348165 MYBBP1AQ9BQG0 1328 aaKnown RBP23.4■■□□□ 1.34
UBE3C-201ENST00000348165 TCERG1O14776 1098 aaKnown RBP23.4■■□□□ 1.34
UBE3C-201ENST00000348165 GORABQ5T7V8 394 aa23.4■■□□□ 1.34
UBE3C-201ENST00000348165 SLKQ9H2G2 1235 aaPredicted RBP23.4■■□□□ 1.34
UBE3C-201ENST00000348165 MFAP1P55081 439 aaKnown RBP23.37■■□□□ 1.33
UBE3C-201ENST00000348165 BCL2L13Q9BXK5 485 aa23.37■■□□□ 1.33
UBE3C-201ENST00000348165 PRKRIP1Q9H875 184 aaPredicted RBP23.37■■□□□ 1.33
UBE3C-201ENST00000348165 HMMRO75330 724 aa23.37■■□□□ 1.33
UBE3C-201ENST00000348165 EVC2Q86UK5 1308 aa23.37■■□□□ 1.33
UBE3C-201ENST00000348165 TAF7LQ5H9L4 462 aa23.37■■□□□ 1.33
UBE3C-201ENST00000348165 TRIM6-TRIM34B2RNG4 842 aa23.36■■□□□ 1.33
UBE3C-201ENST00000348165 USP47Q96K76 1375 aa23.36■■□□□ 1.33
UBE3C-201ENST00000348165 COG3Q96JB2 828 aa23.36■■□□□ 1.33
UBE3C-201ENST00000348165 GNL2Q13823 731 aaKnown RBP23.35■■□□□ 1.33
UBE3C-201ENST00000348165 PHLDB1Q86UU1 1377 aa23.34■■□□□ 1.33
UBE3C-201ENST00000348165 CGNL1Q0VF96 1302 aa23.34■■□□□ 1.33
UBE3C-201ENST00000348165 UACAQ9BZF9 1416 aa23.34■■□□□ 1.33
UBE3C-201ENST00000348165 TSHZ2Q9NRE2 1034 aa23.34■■□□□ 1.33
UBE3C-201ENST00000348165 AQRO60306 1485 aaKnown RBP eCLIP23.33■■□□□ 1.324e-7■■■■■ 31
UBE3C-201ENST00000348165 GOLGA6L6A8MZA4 724 aa23.33■■□□□ 1.32
UBE3C-201ENST00000348165 FAM69CQ0P6D2 419 aa23.33■■□□□ 1.32
UBE3C-201ENST00000348165 HDAC5Q9UQL6 1122 aa23.32■■□□□ 1.32
UBE3C-201ENST00000348165 NRDCO43847 1150 aa23.31■■□□□ 1.32
UBE3C-201ENST00000348165 PLIN1O60240 522 aa23.29■■□□□ 1.32
UBE3C-201ENST00000348165 MYOM3Q5VTT5 1437 aa23.28■■□□□ 1.32
UBE3C-201ENST00000348165 APAF1O14727 1248 aa23.27■■□□□ 1.32
UBE3C-201ENST00000348165 GPATCH3Q96I76 525 aa23.26■■□□□ 1.31
UBE3C-201ENST00000348165 GZF1Q9H116 711 aaPredicted RBP23.26■■□□□ 1.31
UBE3C-201ENST00000348165 L1TD1Q5T7N2 865 aaKnown RBP23.25■■□□□ 1.31
UBE3C-201ENST00000348165 GTF2E1P29083 439 aaPredicted RBP23.25■■□□□ 1.31
UBE3C-201ENST00000348165 GBP4Q96PP9 640 aa23.24■■□□□ 1.31
UBE3C-201ENST00000348165 NOL8Q76FK4 1167 aaKnown RBP23.23■■□□□ 1.31
UBE3C-201ENST00000348165 TMX4Q9H1E5 349 aaPredicted RBP23.23■■□□□ 1.31
UBE3C-201ENST00000348165 DRC7Q8IY82 874 aa23.23■■□□□ 1.31
UBE3C-201ENST00000348165 FGD6Q6ZV73 1430 aa23.22■■□□□ 1.31
UBE3C-201ENST00000348165 TEFQ10587 303 aa23.22■■□□□ 1.31
UBE3C-201ENST00000348165 C1orf141Q5JVX7 400 aa23.21■■□□□ 1.31
UBE3C-201ENST00000348165 E9PSI1 815 aa23.2■■□□□ 1.3
UBE3C-201ENST00000348165 AFAP1Q8N556 730 aa23.2■■□□□ 1.3
UBE3C-201ENST00000348165 FOXD4L1Q9NU39 408 aa23.19■■□□□ 1.3
UBE3C-201ENST00000348165 CLSTN1O94985 981 aa23.19■■□□□ 1.3
UBE3C-201ENST00000348165 EVA1CP58658 441 aa23.19■■□□□ 1.3
UBE3C-201ENST00000348165 NCAPD3P42695 1498 aa23.18■■□□□ 1.3
UBE3C-201ENST00000348165 COG6Q9Y2V7 657 aa23.18■■□□□ 1.3
UBE3C-201ENST00000348165 DIAPH1O60610 1272 aaKnown RBP23.18■■□□□ 1.3
UBE3C-201ENST00000348165 ZKSCAN2Q63HK3 967 aa23.17■■□□□ 1.3
UBE3C-201ENST00000348165 NGEFQ8N5V2 710 aa23.17■■□□□ 1.3
UBE3C-201ENST00000348165 FRAT2O75474 233 aaPredicted RBP23.16■■□□□ 1.3
UBE3C-201ENST00000348165 EXOC6Q8TAG9 804 aa23.16■■□□□ 1.3
UBE3C-201ENST00000348165 HSP90B1P14625 803 aaKnown RBP23.16■■□□□ 1.3
UBE3C-201ENST00000348165 EIF2S2P20042 333 aaKnown RBP23.16■■□□□ 1.3
UBE3C-201ENST00000348165 PSME1Q06323 249 aa23.15■■□□□ 1.3
UBE3C-201ENST00000348165 ANKRD45Q5TZF3 282 aa23.15■■□□□ 1.3
UBE3C-201ENST00000348165 TMEM132EQ6IEE7 984 aa23.15■■□□□ 1.3
UBE3C-201ENST00000348165 MSNP26038 577 aaKnown RBP23.15■■□□□ 1.3
UBE3C-201ENST00000348165 TOMM22Q9NS69 142 aa23.14■■□□□ 1.29
UBE3C-201ENST00000348165 AMER1Q5JTC6 1135 aaPredicted RBP23.13■■□□□ 1.29
UBE3C-201ENST00000348165 NECTIN2Q92692 538 aa23.13■■□□□ 1.29
UBE3C-201ENST00000348165 ANKRD50Q9ULJ7 1429 aa23.13■■□□□ 1.29
UBE3C-201ENST00000348165 RIPK4P57078 832 aa23.13■■□□□ 1.29
UBE3C-201ENST00000348165 CRBNQ96SW2 442 aa23.12■■□□□ 1.29
UBE3C-201ENST00000348165 ZBED9Q6R2W3 1325 aa23.12■■□□□ 1.29
UBE3C-201ENST00000348165 G3V3G9 751 aa23.12■■□□□ 1.29
UBE3C-201ENST00000348165 DCAF8Q5TAQ9 597 aa23.12■■□□□ 1.29
UBE3C-201ENST00000348165 RRP1P56182 461 aaKnown RBP23.12■■□□□ 1.29
UBE3C-201ENST00000348165 RILPL2Q969X0 211 aa23.11■■□□□ 1.29
UBE3C-201ENST00000348165 IPO9Q96P70 1041 aaKnown RBP23.11■■□□□ 1.29
UBE3C-201ENST00000348165 GGNBP2Q9H3C7 697 aa23.1■■□□□ 1.29
UBE3C-201ENST00000348165 KIF7Q2M1P5 1343 aa23.1■■□□□ 1.29
UBE3C-201ENST00000348165 CHAF1AQ13111 956 aaPredicted RBP23.09■■□□□ 1.29
UBE3C-201ENST00000348165 HTATSF1O43719 755 aaKnown RBP23.09■■□□□ 1.29
UBE3C-201ENST00000348165 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.09■■□□□ 1.29
UBE3C-201ENST00000348165 TTC5Q8N0Z6 440 aa23.09■■□□□ 1.29
UBE3C-201ENST00000348165 CENPQQ7L2Z9 268 aaPredicted RBP23.08■■□□□ 1.29
UBE3C-201ENST00000348165 KIF21BO75037 1637 aa23.08■■□□□ 1.29
UBE3C-201ENST00000348165 LRRC9Q6ZRR7 1453 aa23.08■■□□□ 1.28
UBE3C-201ENST00000348165 CABP2Q9NPB3 220 aa23.07■■□□□ 1.28
UBE3C-201ENST00000348165 HMOX1P09601 288 aa23.06■■□□□ 1.28
UBE3C-201ENST00000348165 FOXD4L5Q5VV16 416 aaPredicted RBP23.05■■□□□ 1.28
UBE3C-201ENST00000348165 FOXD4L4Q8WXT5 416 aaPredicted RBP23.05■■□□□ 1.28
UBE3C-201ENST00000348165 NCOA2Q15596 1464 aa23.05■■□□□ 1.28
UBE3C-201ENST00000348165 NEXNQ0ZGT2 675 aa23.04■■□□□ 1.28
UBE3C-201ENST00000348165 C9orf78Q9NZ63 289 aaPredicted RBP23.04■■□□□ 1.28
UBE3C-201ENST00000348165 NUTM2GQ5VZR2 741 aa23.04■■□□□ 1.28
UBE3C-201ENST00000348165 ST18O60284 1047 aa23.04■■□□□ 1.28
UBE3C-201ENST00000348165 CFAP70Q5T0N1 1121 aa23.04■■□□□ 1.28
UBE3C-201ENST00000348165 SYTL4Q96C24 671 aaPredicted RBP23.04■■□□□ 1.28
UBE3C-201ENST00000348165 CCDC7Q96M83 1385 aa23.03■■□□□ 1.28
UBE3C-201ENST00000348165 PTMSP20962 102 aa23.03■■□□□ 1.28
UBE3C-201ENST00000348165 STAC3Q96MF2 364 aa23.03■■□□□ 1.28
UBE3C-201ENST00000348165 SYAP1Q96A49 352 aaPredicted RBP23.03■■□□□ 1.28
UBE3C-201ENST00000348165 PRDM2Q13029 1718 aa23.03■■□□□ 1.28
UBE3C-201ENST00000348165 GRIN2BQ13224 1484 aa23.02■■□□□ 1.28
UBE3C-201ENST00000348165 CASKIN1Q8WXD9 1431 aa23.02■■□□□ 1.28
UBE3C-201ENST00000348165 PDE4AP27815 886 aa23.01■■□□□ 1.27
UBE3C-201ENST00000348165 CUX1P39880 1505 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms