RNA–Protein interactions for RNA: ENST00000346623.6

ALDH1A3-202, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 1 (best) BASIC

Gene ALDH1A3, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-202ENST00000346623 SHROOM2Q13796 1616 aa19.82■□□□□ 0.76
ALDH1A3-202ENST00000346623 DHX29Q7Z478 1369 aaKnown RBP19.81■□□□□ 0.76
ALDH1A3-202ENST00000346623 PLA2R1Q13018 1463 aa19.8■□□□□ 0.76
ALDH1A3-202ENST00000346623 SALL2Q9Y467 1007 aaPredicted RBP19.78■□□□□ 0.76
ALDH1A3-202ENST00000346623 KDM5CP41229 1560 aa19.77■□□□□ 0.76
ALDH1A3-202ENST00000346623 PLCH2O75038 1416 aa19.76■□□□□ 0.75
ALDH1A3-202ENST00000346623 SPAG9O60271 1321 aaKnown RBP19.76■□□□□ 0.75
ALDH1A3-202ENST00000346623 ZCCHC11Q5TAX3 1644 aaKnown RBP19.75■□□□□ 0.75
ALDH1A3-202ENST00000346623 RALGAPBQ86X10 1494 aa19.75■□□□□ 0.75
ALDH1A3-202ENST00000346623 UHRF1BP1Q6BDS2 1440 aa19.74■□□□□ 0.75
ALDH1A3-202ENST00000346623 TMC1Q8TDI8 760 aa19.74■□□□□ 0.75
ALDH1A3-202ENST00000346623 KDM5DQ9BY66 1539 aa19.73■□□□□ 0.75
ALDH1A3-202ENST00000346623 MYO5CQ9NQX4 1742 aa19.72■□□□□ 0.75
ALDH1A3-202ENST00000346623 CLASP1Q7Z460 1538 aa19.7■□□□□ 0.74
ALDH1A3-202ENST00000346623 KIF3BO15066 747 aa19.7■□□□□ 0.74
ALDH1A3-202ENST00000346623 CC2D1BQ5T0F9 858 aaKnown RBP19.69■□□□□ 0.74
ALDH1A3-202ENST00000346623 PRAG1Q86YV5 1406 aa19.69■□□□□ 0.74
ALDH1A3-202ENST00000346623 A2MP01023 1474 aa19.69■□□□□ 0.74
ALDH1A3-202ENST00000346623 ZBED9Q6R2W3 1325 aa19.67■□□□□ 0.74
ALDH1A3-202ENST00000346623 SCAPERQ9BY12 1400 aa19.65■□□□□ 0.74
ALDH1A3-202ENST00000346623 SENP3Q9H4L4 574 aaPredicted RBP19.65■□□□□ 0.74
ALDH1A3-202ENST00000346623 B4GALNT3Q6L9W6 998 aa19.65■□□□□ 0.74
ALDH1A3-202ENST00000346623 PNISRQ8TF01 805 aaKnown RBP19.65■□□□□ 0.74
ALDH1A3-202ENST00000346623 DISP3Q9P2K9 1392 aa19.64■□□□□ 0.74
ALDH1A3-202ENST00000346623 DUOX2Q9NRD8 1548 aa19.62■□□□□ 0.73
ALDH1A3-202ENST00000346623 TESK2Q96S53 571 aa19.62■□□□□ 0.73
ALDH1A3-202ENST00000346623 POLR1AO95602 1720 aaPredicted RBP19.61■□□□□ 0.73
ALDH1A3-202ENST00000346623 PANK3Q9H999 370 aa19.61■□□□□ 0.73
ALDH1A3-202ENST00000346623 ABCC1P33527 1531 aa19.61■□□□□ 0.73
ALDH1A3-202ENST00000346623 UNC13BO14795 1591 aa19.59■□□□□ 0.73
ALDH1A3-202ENST00000346623 MAST1Q9Y2H9 1570 aa19.59■□□□□ 0.73
ALDH1A3-202ENST00000346623 FANCAO15360 1455 aa19.59■□□□□ 0.73
ALDH1A3-202ENST00000346623 ARID4BQ4LE39 1312 aaPredicted RBP19.59■□□□□ 0.73
ALDH1A3-202ENST00000346623 UHRF1BP1LA0JNW5 1464 aa19.58■□□□□ 0.73
ALDH1A3-202ENST00000346623 ERBINQ96RT1 1412 aa19.58■□□□□ 0.72
ALDH1A3-202ENST00000346623 CHGAP10645 457 aaKnown RBP19.58■□□□□ 0.72
ALDH1A3-202ENST00000346623 WDR7Q9Y4E6 1490 aa19.57■□□□□ 0.72
ALDH1A3-202ENST00000346623 PLXNC1O60486 1568 aa19.57■□□□□ 0.72
ALDH1A3-202ENST00000346623 RBM19Q9Y4C8 960 aaKnown RBP19.56■□□□□ 0.72
ALDH1A3-202ENST00000346623 ASXL2Q76L83 1435 aa19.56■□□□□ 0.72
ALDH1A3-202ENST00000346623 PER1O15534 1290 aaPredicted RBP19.56■□□□□ 0.72
ALDH1A3-202ENST00000346623 IQGAP3Q86VI3 1631 aa19.55■□□□□ 0.72
ALDH1A3-202ENST00000346623 TRPM1Q7Z4N2 1603 aa19.55■□□□□ 0.72
ALDH1A3-202ENST00000346623 MYBBP1AQ9BQG0 1328 aaKnown RBP19.55■□□□□ 0.72
ALDH1A3-202ENST00000346623 GGT6Q6P531 493 aa19.55■□□□□ 0.72
ALDH1A3-202ENST00000346623 NPM1P06748 294 aaKnown RBP eCLIP19.54■□□□□ 0.72
ALDH1A3-202ENST00000346623 OSCARQ8IYS5 282 aa19.54■□□□□ 0.72
ALDH1A3-202ENST00000346623 ADGRL1O94910 1474 aa19.53■□□□□ 0.72
ALDH1A3-202ENST00000346623 TMF1P82094 1093 aa19.52■□□□□ 0.72
ALDH1A3-202ENST00000346623 CFAP70Q5T0N1 1121 aa19.51■□□□□ 0.71
ALDH1A3-202ENST00000346623 RALBP1Q15311 655 aa19.51■□□□□ 0.71
ALDH1A3-202ENST00000346623 ZFYVE16Q7Z3T8 1539 aa19.5■□□□□ 0.71
ALDH1A3-202ENST00000346623 UGGT1Q9NYU2 1555 aa19.5■□□□□ 0.71
ALDH1A3-202ENST00000346623 NUTM2DQ5VT03 806 aaPredicted RBP19.5■□□□□ 0.71
ALDH1A3-202ENST00000346623 KTN1Q86UP2 1357 aaKnown RBP19.5■□□□□ 0.71
ALDH1A3-202ENST00000346623 ATP10AO60312 1499 aa19.5■□□□□ 0.71
ALDH1A3-202ENST00000346623 NUDCQ9Y266 331 aa19.49■□□□□ 0.71
ALDH1A3-202ENST00000346623 RAPGEF3O95398 923 aa19.49■□□□□ 0.71
ALDH1A3-202ENST00000346623 PPP4R2Q9NY27 417 aa19.49■□□□□ 0.71
ALDH1A3-202ENST00000346623 GPRASP1Q5JY77 1395 aa19.48■□□□□ 0.71
ALDH1A3-202ENST00000346623 E9PCH4 1651 aa19.48■□□□□ 0.71
ALDH1A3-202ENST00000346623 MAGI2Q86UL8 1455 aa19.47■□□□□ 0.71
ALDH1A3-202ENST00000346623 CDCA7LQ96GN5 454 aa19.47■□□□□ 0.71
ALDH1A3-202ENST00000346623 ADGRF5Q8IZF2 1346 aa19.47■□□□□ 0.71
ALDH1A3-202ENST00000346623 NLRP13Q86W25 1043 aa19.47■□□□□ 0.71
ALDH1A3-202ENST00000346623 ATP7AQ04656 1500 aa19.45■□□□□ 0.7
ALDH1A3-202ENST00000346623 KANK1Q14678 1352 aa19.45■□□□□ 0.7
ALDH1A3-202ENST00000346623 COL17A1Q9UMD9 1497 aaPredicted RBP19.44■□□□□ 0.7
ALDH1A3-202ENST00000346623 BRD4O60885 1362 aaPredicted RBP19.43■□□□□ 0.7
ALDH1A3-202ENST00000346623 CFAP65Q6ZU64 1925 aaKnown RBP19.43■□□□□ 0.7
ALDH1A3-202ENST00000346623 RTEL1-TNFRSF6BF6WH68 1400 aa19.43■□□□□ 0.7
ALDH1A3-202ENST00000346623 PRDM15P57071 1507 aaPredicted RBP19.42■□□□□ 0.7
ALDH1A3-202ENST00000346623 PARD3Q8TEW0 1356 aa19.42■□□□□ 0.7
ALDH1A3-202ENST00000346623 SMG6Q86US8 1419 aaKnown RBP19.41■□□□□ 0.7
ALDH1A3-202ENST00000346623 KNSTRNQ9Y448 316 aa19.4■□□□□ 0.7
ALDH1A3-202ENST00000346623 CLTCL1P53675 1640 aa19.4■□□□□ 0.7
ALDH1A3-202ENST00000346623 LRPPRCP42704 1394 aaKnown RBP19.4■□□□□ 0.7
ALDH1A3-202ENST00000346623 TMEM132EQ6IEE7 984 aa19.39■□□□□ 0.69
ALDH1A3-202ENST00000346623 CD109Q6YHK3 1445 aa19.38■□□□□ 0.69
ALDH1A3-202ENST00000346623 CYB5RLQ6IPT4 315 aa19.37■□□□□ 0.69
ALDH1A3-202ENST00000346623 ADAMTS8Q9UP79 889 aa19.37■□□□□ 0.69
ALDH1A3-202ENST00000346623 TRAK1Q9UPV9 953 aa19.37■□□□□ 0.69
ALDH1A3-202ENST00000346623 ABCA9Q8IUA7 1624 aa19.36■□□□□ 0.69
ALDH1A3-202ENST00000346623 PTPRTO14522 1441 aa19.36■□□□□ 0.69
ALDH1A3-202ENST00000346623 PLIN1O60240 522 aa19.36■□□□□ 0.69
ALDH1A3-202ENST00000346623 TRPM2O94759 1503 aa19.35■□□□□ 0.69
ALDH1A3-202ENST00000346623 CCDC136Q96JN2 1154 aa19.35■□□□□ 0.69
ALDH1A3-202ENST00000346623 WASHC2CQ9Y4E1 1318 aa19.34■□□□□ 0.69
ALDH1A3-202ENST00000346623 MADDQ8WXG6 1647 aa19.33■□□□□ 0.69
ALDH1A3-202ENST00000346623 INO80Q9ULG1 1556 aaPredicted RBP19.33■□□□□ 0.69
ALDH1A3-202ENST00000346623 SPHKAPQ2M3C7 1700 aa19.32■□□□□ 0.68
ALDH1A3-202ENST00000346623 TNNT2P45379 298 aaPredicted RBP19.32■□□□□ 0.68
ALDH1A3-202ENST00000346623 PPP2R1AP30153 589 aa19.32■□□□□ 0.68
ALDH1A3-202ENST00000346623 EIF2AK4Q9P2K8 1649 aaKnown RBP19.32■□□□□ 0.68
ALDH1A3-202ENST00000346623 SAFB2Q14151 953 aaKnown RBP eCLIP19.31■□□□□ 0.68
ALDH1A3-202ENST00000346623 AMER1Q5JTC6 1135 aaPredicted RBP19.31■□□□□ 0.68
ALDH1A3-202ENST00000346623 CCDC146Q8IYE0 955 aa19.31■□□□□ 0.68
ALDH1A3-202ENST00000346623 ARAP3Q8WWN8 1544 aa19.31■□□□□ 0.68
ALDH1A3-202ENST00000346623 EXOC6Q8TAG9 804 aa19.3■□□□□ 0.68
ALDH1A3-202ENST00000346623 SCAF11Q99590 1463 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms