RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 LAS1LQ9Y4W2 734 aaKnown RBP17.65■□□□□ 0.42
CASC4-202ENST00000345795 TRHP20396 242 aaPredicted RBP17.64■□□□□ 0.42
CASC4-202ENST00000345795 KDM6BO15054 1643 aa17.64■□□□□ 0.41
CASC4-202ENST00000345795 KIAA1107Q9UPP5 1409 aa17.64■□□□□ 0.41
CASC4-202ENST00000345795 PPP4R2Q9NY27 417 aa17.63■□□□□ 0.41
CASC4-202ENST00000345795 ABCA5Q8WWZ7 1642 aa17.63■□□□□ 0.41
CASC4-202ENST00000345795 EIF4G3O43432 1585 aaKnown RBP17.63■□□□□ 0.41
CASC4-202ENST00000345795 KTN1Q86UP2 1357 aaKnown RBP17.63■□□□□ 0.41
CASC4-202ENST00000345795 BCL2L13Q9BXK5 485 aa17.62■□□□□ 0.41
CASC4-202ENST00000345795 ADAMTS12P58397 1594 aa17.62■□□□□ 0.41
CASC4-202ENST00000345795 CNTLNQ9NXG0 1405 aa17.62■□□□□ 0.41
CASC4-202ENST00000345795 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.62■□□□□ 0.417e-7■■■■■ 52.8
CASC4-202ENST00000345795 KANK1Q14678 1352 aa17.61■□□□□ 0.41
CASC4-202ENST00000345795 TARBP1Q13395 1621 aaKnown RBP17.6■□□□□ 0.41
CASC4-202ENST00000345795 C14orf37Q86TY3 774 aa17.6■□□□□ 0.41
CASC4-202ENST00000345795 FAM69CQ0P6D2 419 aa17.59■□□□□ 0.41
CASC4-202ENST00000345795 RSPH4AQ5TD94 716 aa17.59■□□□□ 0.41
CASC4-202ENST00000345795 AKNAQ7Z591 1439 aa17.59■□□□□ 0.41
CASC4-202ENST00000345795 PLEKHH2Q8IVE3 1493 aa17.59■□□□□ 0.41
CASC4-202ENST00000345795 MORC1Q86VD1 984 aa17.58■□□□□ 0.41
CASC4-202ENST00000345795 EXOC6Q8TAG9 804 aa17.58■□□□□ 0.41
CASC4-202ENST00000345795 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.58■□□□□ 0.4
CASC4-202ENST00000345795 MINK1Q8N4C8 1332 aaPredicted RBP17.58■□□□□ 0.4
CASC4-202ENST00000345795 NLRP13Q86W25 1043 aa17.57■□□□□ 0.4
CASC4-202ENST00000345795 RCAN3Q9UKA8 241 aa17.57■□□□□ 0.4
CASC4-202ENST00000345795 CLUAP1Q96AJ1 413 aa17.57■□□□□ 0.4
CASC4-202ENST00000345795 WDR62O43379 1518 aa17.56■□□□□ 0.4
CASC4-202ENST00000345795 CFAP43Q8NDM7 1665 aa17.55■□□□□ 0.4
CASC4-202ENST00000345795 NUDCQ9Y266 331 aa17.55■□□□□ 0.4
CASC4-202ENST00000345795 ADAMTS8Q9UP79 889 aa17.55■□□□□ 0.4
CASC4-202ENST00000345795 APAF1O14727 1248 aa17.54■□□□□ 0.4
CASC4-202ENST00000345795 ANP32AP39687 249 aaKnown RBP17.54■□□□□ 0.4
CASC4-202ENST00000345795 KIAA0556O60303 1618 aa17.54■□□□□ 0.4
CASC4-202ENST00000345795 SLC12A5Q9H2X9 1139 aa17.54■□□□□ 0.4
CASC4-202ENST00000345795 MYBBP1AQ9BQG0 1328 aaKnown RBP17.53■□□□□ 0.4
CASC4-202ENST00000345795 CABP2Q9NPB3 220 aa17.53■□□□□ 0.4
CASC4-202ENST00000345795 KIF14Q15058 1648 aa17.52■□□□□ 0.4
CASC4-202ENST00000345795 U2AF1L5P0DN76 240 aaPredicted RBP17.52■□□□□ 0.4
CASC4-202ENST00000345795 U2AF1Q01081 240 aaKnown RBP eCLIP17.52■□□□□ 0.4
CASC4-202ENST00000345795 RAPGEF6Q8TEU7 1601 aa17.52■□□□□ 0.4
CASC4-202ENST00000345795 MYT1Q01538 1121 aa17.51■□□□□ 0.39
CASC4-202ENST00000345795 ARXQ96QS3 562 aa17.5■□□□□ 0.39
CASC4-202ENST00000345795 CEP170Q5SW79 1584 aa17.5■□□□□ 0.39
CASC4-202ENST00000345795 ZBED9Q6R2W3 1325 aa17.5■□□□□ 0.39
CASC4-202ENST00000345795 PBRM1Q86U86 1689 aa17.5■□□□□ 0.39
CASC4-202ENST00000345795 RPRD2Q5VT52 1461 aaKnown RBP17.5■□□□□ 0.39
CASC4-202ENST00000345795 RALBP1Q15311 655 aa17.5■□□□□ 0.39
CASC4-202ENST00000345795 ROCK1Q13464 1354 aa17.49■□□□□ 0.39
CASC4-202ENST00000345795 CDCA8Q53HL2 280 aa17.49■□□□□ 0.39
CASC4-202ENST00000345795 PNISRQ8TF01 805 aaKnown RBP17.49■□□□□ 0.39
CASC4-202ENST00000345795 SAMD9Q5K651 1589 aa17.48■□□□□ 0.39
CASC4-202ENST00000345795 TCERG1O14776 1098 aaKnown RBP17.48■□□□□ 0.39
CASC4-202ENST00000345795 ADGRF5Q8IZF2 1346 aa17.48■□□□□ 0.39
CASC4-202ENST00000345795 FBLN1P23142 703 aa17.47■□□□□ 0.39
CASC4-202ENST00000345795 NEFMP07197 916 aa17.47■□□□□ 0.39
CASC4-202ENST00000345795 RTL5Q5HYW3 569 aaPredicted RBP17.46■□□□□ 0.39
CASC4-202ENST00000345795 LMOD2Q6P5Q4 547 aa17.46■□□□□ 0.39
CASC4-202ENST00000345795 GGNBP2Q9H3C7 697 aa17.46■□□□□ 0.39
CASC4-202ENST00000345795 ELL2O00472 640 aaPredicted RBP17.46■□□□□ 0.39
CASC4-202ENST00000345795 FBXO31Q5XUX0 539 aaPredicted RBP17.45■□□□□ 0.38
CASC4-202ENST00000345795 TRAPPC8Q9Y2L5 1435 aa17.45■□□□□ 0.38
CASC4-202ENST00000345795 SYCP2Q9BX26 1530 aa17.43■□□□□ 0.38
CASC4-202ENST00000345795 CCDC141Q6ZP82 1450 aa17.43■□□□□ 0.38
CASC4-202ENST00000345795 DISP3Q9P2K9 1392 aa17.43■□□□□ 0.38
CASC4-202ENST00000345795 CRBNQ96SW2 442 aa17.42■□□□□ 0.38
CASC4-202ENST00000345795 PZPP20742 1482 aa17.41■□□□□ 0.38
CASC4-202ENST00000345795 SLC4A3P48751 1232 aa17.4■□□□□ 0.38
CASC4-202ENST00000345795 ZBTB47Q9UFB7 747 aaPredicted RBP17.4■□□□□ 0.38
CASC4-202ENST00000345795 ERCC6L2Q5T890 1561 aa17.4■□□□□ 0.38
CASC4-202ENST00000345795 RBM33Q96EV2 1170 aaKnown RBP17.38■□□□□ 0.37
CASC4-202ENST00000345795 CFAP53Q96M91 514 aa17.37■□□□□ 0.37
CASC4-202ENST00000345795 ANP32EQ9BTT0 268 aa17.37■□□□□ 0.37
CASC4-202ENST00000345795 PPP2R1AP30153 589 aa17.37■□□□□ 0.37
CASC4-202ENST00000345795 NUP160Q12769 1436 aa17.37■□□□□ 0.37
CASC4-202ENST00000345795 TCOF1Q13428 1488 aaKnown RBP17.37■□□□□ 0.37
CASC4-202ENST00000345795 C20orf194Q5TEA3 1177 aa17.36■□□□□ 0.37
CASC4-202ENST00000345795 RRP1P56182 461 aaKnown RBP17.36■□□□□ 0.37
CASC4-202ENST00000345795 DENND4BO75064 1496 aaPredicted RBP17.36■□□□□ 0.37
CASC4-202ENST00000345795 GOLGA2Q08379 1002 aa17.36■□□□□ 0.37
CASC4-202ENST00000345795 CENPJQ9HC77 1338 aaPredicted RBP17.35■□□□□ 0.37
CASC4-202ENST00000345795 MAPK8IP3Q9UPT6 1336 aa17.34■□□□□ 0.37
CASC4-202ENST00000345795 MTHFSP49914 203 aa17.34■□□□□ 0.37
CASC4-202ENST00000345795 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.34■□□□□ 0.37
CASC4-202ENST00000345795 SPRYD3Q8NCJ5 442 aa17.34■□□□□ 0.37
CASC4-202ENST00000345795 COG6Q9Y2V7 657 aa17.33■□□□□ 0.37
CASC4-202ENST00000345795 APBB1O00213 710 aa17.33■□□□□ 0.36
CASC4-202ENST00000345795 HMOX1P09601 288 aa17.33■□□□□ 0.36
CASC4-202ENST00000345795 NUTM2GQ5VZR2 741 aa17.33■□□□□ 0.36
CASC4-202ENST00000345795 BCAR3O75815 825 aa17.32■□□□□ 0.36
CASC4-202ENST00000345795 WAPLQ7Z5K2 1190 aa17.32■□□□□ 0.36
CASC4-202ENST00000345795 FTSJ3Q8IY81 847 aaKnown RBP17.32■□□□□ 0.36
CASC4-202ENST00000345795 PRAM1Q96QH2 718 aa17.32■□□□□ 0.36
CASC4-202ENST00000345795 CFAP65Q6ZU64 1925 aaKnown RBP17.32■□□□□ 0.36
CASC4-202ENST00000345795 LRRIQ1Q96JM4 1722 aa17.32■□□□□ 0.36
CASC4-202ENST00000345795 PAK3O75914 559 aaPredicted RBP17.31■□□□□ 0.36
CASC4-202ENST00000345795 ERBINQ96RT1 1412 aa17.31■□□□□ 0.36
CASC4-202ENST00000345795 IDI1Q13907 227 aa17.31■□□□□ 0.36
CASC4-202ENST00000345795 LTV1Q96GA3 475 aaPredicted RBP17.31■□□□□ 0.36
CASC4-202ENST00000345795 CEBPAP49715 358 aaPredicted RBP17.3■□□□□ 0.36
CASC4-202ENST00000345795 TXNDC2Q86VQ3 553 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms