RNA–Protein interactions for RNA: ENST00000344876.8

PCDH18-201, Transcript of protocadherin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH18, Length 5,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-201ENST00000344876 SMC4Q9NTJ3 1288 aa8.14□□□□□ -1.11
PCDH18-201ENST00000344876 DDX49Q9Y6V7 483 aaKnown RBP8.13□□□□□ -1.11
PCDH18-201ENST00000344876 PAK3O75914 559 aaPredicted RBP8.13□□□□□ -1.11
PCDH18-201ENST00000344876 GORABQ5T7V8 394 aa8.13□□□□□ -1.11
PCDH18-201ENST00000344876 IPO8O15397 1037 aaKnown RBP8.13□□□□□ -1.11
PCDH18-201ENST00000344876 BCL2L13Q9BXK5 485 aa8.13□□□□□ -1.11
PCDH18-201ENST00000344876 GSE1Q14687 1217 aa8.13□□□□□ -1.11
PCDH18-201ENST00000344876 TPM3P06753 285 aa8.12□□□□□ -1.11
PCDH18-201ENST00000344876 CCER2I3L3R5 266 aa8.12□□□□□ -1.11
PCDH18-201ENST00000344876 HTATSF1O43719 755 aaKnown RBP8.12□□□□□ -1.11
PCDH18-201ENST00000344876 FBXW7Q969H0 707 aa8.12□□□□□ -1.11
PCDH18-201ENST00000344876 SF3A1Q15459 793 aaKnown RBP8.12□□□□□ -1.11
PCDH18-201ENST00000344876 RBM25P49756 843 aaKnown RBP8.12□□□□□ -1.11
PCDH18-201ENST00000344876 PLCD3Q8N3E9 789 aa8.12□□□□□ -1.11
PCDH18-201ENST00000344876 E9PSI1 815 aa8.11□□□□□ -1.11
PCDH18-201ENST00000344876 VPS53Q5VIR6 699 aa8.11□□□□□ -1.11
PCDH18-201ENST00000344876 RRP7AQ9Y3A4 280 aaKnown RBP8.11□□□□□ -1.11
PCDH18-201ENST00000344876 RDXP35241 583 aaKnown RBP8.11□□□□□ -1.11
PCDH18-201ENST00000344876 MTERF4Q7Z6M4 381 aaKnown RBP8.11□□□□□ -1.11
PCDH18-201ENST00000344876 HMGB1P1B2RPK0 211 aaPredicted RBP8.11□□□□□ -1.11
PCDH18-201ENST00000344876 ELL2O00472 640 aaPredicted RBP8.11□□□□□ -1.11
PCDH18-201ENST00000344876 SCRIBQ14160 1630 aa8.1□□□□□ -1.11
PCDH18-201ENST00000344876 RILPL2Q969X0 211 aa8.1□□□□□ -1.11
PCDH18-201ENST00000344876 TNNT1P13805 278 aa8.1□□□□□ -1.11
PCDH18-201ENST00000344876 PMFBP1Q8TBY8 1022 aa8.1□□□□□ -1.11
PCDH18-201ENST00000344876 KTN1Q86UP2 1357 aaKnown RBP8.1□□□□□ -1.11
PCDH18-201ENST00000344876 RSF1Q96T23 1441 aaPredicted RBP8.09□□□□□ -1.11
PCDH18-201ENST00000344876 HSP90AB3PQ58FF7 597 aa8.09□□□□□ -1.11
PCDH18-201ENST00000344876 CEP89Q96ST8 783 aa8.09□□□□□ -1.11
PCDH18-201ENST00000344876 PDE4AP27815 886 aa8.09□□□□□ -1.11
PCDH18-201ENST00000344876 TPD52L1Q16890 204 aaPredicted RBP8.09□□□□□ -1.11
PCDH18-201ENST00000344876 DYDC1Q8WWB3 177 aa8.09□□□□□ -1.11
PCDH18-201ENST00000344876 TEX35Q5T0J7 233 aa8.08□□□□□ -1.12
PCDH18-201ENST00000344876 PRDM10Q9NQV6 1147 aa8.08□□□□□ -1.12
PCDH18-201ENST00000344876 PAF1Q8N7H5 531 aa8.08□□□□□ -1.12
PCDH18-201ENST00000344876 CSB-PGBD3P0DP91 1061 aa8.08□□□□□ -1.12
PCDH18-201ENST00000344876 NUTM2DQ5VT03 806 aaPredicted RBP8.08□□□□□ -1.12
PCDH18-201ENST00000344876 KIF16BQ96L93 1317 aa8.08□□□□□ -1.12
PCDH18-201ENST00000344876 BECN2A8MW95 431 aa8.08□□□□□ -1.12
PCDH18-201ENST00000344876 ARID4AP29374 1257 aaPredicted RBP8.08□□□□□ -1.12
PCDH18-201ENST00000344876 RSPH4AQ5TD94 716 aa8.08□□□□□ -1.12
PCDH18-201ENST00000344876 MCTP1Q6DN14 999 aa8.08□□□□□ -1.12
PCDH18-201ENST00000344876 TMCO5BA8MYB1 307 aa8.08□□□□□ -1.12
PCDH18-201ENST00000344876 GOLGA6L19H0YKK7 550 aa8.08□□□□□ -1.12
PCDH18-201ENST00000344876 H3BQV1 296 aa8.08□□□□□ -1.12
PCDH18-201ENST00000344876 MARCH6O60337 910 aa8.08□□□□□ -1.12
PCDH18-201ENST00000344876 IFFO2Q5TF58 517 aa8.08□□□□□ -1.12
PCDH18-201ENST00000344876 EXOC6Q8TAG9 804 aa8.08□□□□□ -1.12
PCDH18-201ENST00000344876 GPATCH11Q8N954 259 aa8.07□□□□□ -1.12
PCDH18-201ENST00000344876 ST18O60284 1047 aa8.07□□□□□ -1.12
PCDH18-201ENST00000344876 FOSBP53539 338 aa8.07□□□□□ -1.12
PCDH18-201ENST00000344876 CNPY4Q8N129 248 aa8.07□□□□□ -1.12
PCDH18-201ENST00000344876 TSPYL1Q9H0U9 437 aa8.07□□□□□ -1.12
PCDH18-201ENST00000344876 CWC15Q9P013 229 aaKnown RBP8.07□□□□□ -1.12
PCDH18-201ENST00000344876 ANKRD45Q5TZF3 282 aa8.07□□□□□ -1.12
PCDH18-201ENST00000344876 LTV1Q96GA3 475 aaPredicted RBP8.07□□□□□ -1.12
PCDH18-201ENST00000344876 NUTM2FA1L443 756 aa8.07□□□□□ -1.12
PCDH18-201ENST00000344876 STK31Q9BXU1 1019 aa8.06□□□□□ -1.12
PCDH18-201ENST00000344876 DEF6Q9H4E7 631 aa8.06□□□□□ -1.12
PCDH18-201ENST00000344876 CCDC180Q9P1Z9 1646 aa8.06□□□□□ -1.12
PCDH18-201ENST00000344876 DDX11L8A8MPP1 907 aa8.06□□□□□ -1.12
PCDH18-201ENST00000344876 PHF14O94880 888 aa8.06□□□□□ -1.12
PCDH18-201ENST00000344876 KCNA4P22459 653 aa8.06□□□□□ -1.12
PCDH18-201ENST00000344876 CSPP1Q1MSJ5 1256 aa8.06□□□□□ -1.12
PCDH18-201ENST00000344876 TPM2P07951 284 aa8.05□□□□□ -1.12
PCDH18-201ENST00000344876 PKD2Q13563 968 aa8.05□□□□□ -1.12
PCDH18-201ENST00000344876 GGT6Q6P531 493 aa8.05□□□□□ -1.12
PCDH18-201ENST00000344876 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.05□□□□□ -1.12
PCDH18-201ENST00000344876 CENPJQ9HC77 1338 aaPredicted RBP8.05□□□□□ -1.12
PCDH18-201ENST00000344876 HOMER1Q86YM7 354 aa8.05□□□□□ -1.12
PCDH18-201ENST00000344876 GOLGA3Q08378 1498 aa8.05□□□□□ -1.12
PCDH18-201ENST00000344876 NAP1L1P55209 391 aaKnown RBP8.05□□□□□ -1.12
PCDH18-201ENST00000344876 FAM184AQ8NB25 1140 aa8.05□□□□□ -1.12
PCDH18-201ENST00000344876 PCMTD1Q96MG8 357 aaPredicted RBP8.05□□□□□ -1.12
PCDH18-201ENST00000344876 FRAT2O75474 233 aaPredicted RBP8.05□□□□□ -1.12
PCDH18-201ENST00000344876 SKIDA1Q1XH10 827 aa8.05□□□□□ -1.12
PCDH18-201ENST00000344876 CCDC34Q96HJ3 373 aa8.05□□□□□ -1.12
PCDH18-201ENST00000344876 MRVI1Q9Y6F6 885 aa8.05□□□□□ -1.12
PCDH18-201ENST00000344876 GPATCH3Q96I76 525 aa8.04□□□□□ -1.12
PCDH18-201ENST00000344876 CRBNQ96SW2 442 aa8.04□□□□□ -1.12
PCDH18-201ENST00000344876 HDGFL2Q7Z4V5 671 aaPredicted RBP8.04□□□□□ -1.12
PCDH18-201ENST00000344876 R3HCC1Q9Y3T6 440 aaKnown RBP8.04□□□□□ -1.12
PCDH18-201ENST00000344876 RAD21O60216 631 aa8.04□□□□□ -1.12
PCDH18-201ENST00000344876 GPS2Q13227 327 aa8.04□□□□□ -1.12
PCDH18-201ENST00000344876 TSR1Q2NL82 804 aaKnown RBP8.04□□□□□ -1.12
PCDH18-201ENST00000344876 SUDS3Q9H7L9 328 aaPredicted RBP8.04□□□□□ -1.12
PCDH18-201ENST00000344876 COG6Q9Y2V7 657 aa8.03□□□□□ -1.12
PCDH18-201ENST00000344876 HMMRO75330 724 aa8.03□□□□□ -1.12
PCDH18-201ENST00000344876 FAM161AQ3B820 660 aa8.03□□□□□ -1.12
PCDH18-201ENST00000344876 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.03□□□□□ -1.12
PCDH18-201ENST00000344876 NGEFQ8N5V2 710 aa8.03□□□□□ -1.12
PCDH18-201ENST00000344876 ROCK2O75116 1388 aaKnown RBP8.03□□□□□ -1.12
PCDH18-201ENST00000344876 CCNB3Q8WWL7 1395 aa8.02□□□□□ -1.13
PCDH18-201ENST00000344876 KDM4AO75164 1064 aa8.02□□□□□ -1.13
PCDH18-201ENST00000344876 NECTIN2Q92692 538 aa8.02□□□□□ -1.13
PCDH18-201ENST00000344876 MPHOSPH10O00566 681 aaKnown RBP8.02□□□□□ -1.13
PCDH18-201ENST00000344876 FAM43AQ8N2R8 423 aa8.02□□□□□ -1.13
PCDH18-201ENST00000344876 RBM28Q9NW13 759 aaKnown RBP8.02□□□□□ -1.13
PCDH18-201ENST00000344876 RRP12Q5JTH9 1297 aaKnown RBP8.02□□□□□ -1.13
PCDH18-201ENST00000344876 RNF214Q8ND24 703 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms