RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 FAM161AQ3B820 660 aa10.23□□□□□ -0.77
MCPH1-201ENST00000344683 CAGE1Q8TC20 777 aa10.23□□□□□ -0.77
MCPH1-201ENST00000344683 CENPQQ7L2Z9 268 aaPredicted RBP10.23□□□□□ -0.77
MCPH1-201ENST00000344683 PLPPR3Q6T4P5 718 aa10.22□□□□□ -0.77
MCPH1-201ENST00000344683 NEFHP12036 1026 aa10.22□□□□□ -0.77
MCPH1-201ENST00000344683 HMGN5P82970 282 aaKnown RBP10.22□□□□□ -0.77
MCPH1-201ENST00000344683 DEF6Q9H4E7 631 aa10.22□□□□□ -0.77
MCPH1-201ENST00000344683 DYDC1Q8WWB3 177 aa10.21□□□□□ -0.77
MCPH1-201ENST00000344683 CEP162Q5TB80 1403 aa10.21□□□□□ -0.77
MCPH1-201ENST00000344683 CCDC173Q0VFZ6 552 aa10.21□□□□□ -0.77
MCPH1-201ENST00000344683 FAM184AQ8NB25 1140 aa10.21□□□□□ -0.78
MCPH1-201ENST00000344683 CCDC47Q96A33 483 aaKnown RBP10.21□□□□□ -0.78
MCPH1-201ENST00000344683 TSPYL1Q9H0U9 437 aa10.21□□□□□ -0.78
MCPH1-201ENST00000344683 POGKQ9P215 609 aa10.2□□□□□ -0.78
MCPH1-201ENST00000344683 RGL3Q3MIN7 710 aa10.2□□□□□ -0.78
MCPH1-201ENST00000344683 PDE3BQ13370 1112 aa10.2□□□□□ -0.78
MCPH1-201ENST00000344683 NAT10Q9H0A0 1025 aaKnown RBP10.2□□□□□ -0.78
MCPH1-201ENST00000344683 DHX8Q14562 1220 aaKnown RBP10.2□□□□□ -0.78
MCPH1-201ENST00000344683 RRP9O43818 475 aaKnown RBP10.2□□□□□ -0.78
MCPH1-201ENST00000344683 HSP90AB3PQ58FF7 597 aa10.2□□□□□ -0.78
MCPH1-201ENST00000344683 KIAA0754O94854 1291 aa10.2□□□□□ -0.78
MCPH1-201ENST00000344683 LETM1O95202 739 aaPredicted RBP10.19□□□□□ -0.78
MCPH1-201ENST00000344683 IFT57Q9NWB7 429 aa10.19□□□□□ -0.78
MCPH1-201ENST00000344683 SENP3-EIF4A1A0A087X0R7 540 aa10.19□□□□□ -0.78
MCPH1-201ENST00000344683 MORC1Q86VD1 984 aa10.18□□□□□ -0.78
MCPH1-201ENST00000344683 PCMTD1Q96MG8 357 aaPredicted RBP10.18□□□□□ -0.78
MCPH1-201ENST00000344683 GORABQ5T7V8 394 aa10.18□□□□□ -0.78
MCPH1-201ENST00000344683 SASS6Q6UVJ0 657 aa10.18□□□□□ -0.78
MCPH1-201ENST00000344683 MRE11P49959 708 aa10.18□□□□□ -0.78
MCPH1-201ENST00000344683 MARCH6O60337 910 aa10.17□□□□□ -0.78
MCPH1-201ENST00000344683 APBB1O00213 710 aa10.17□□□□□ -0.78
MCPH1-201ENST00000344683 SPAG9O60271 1321 aaKnown RBP10.17□□□□□ -0.78
MCPH1-201ENST00000344683 LRRFIP1Q32MZ4 808 aaKnown RBP10.17□□□□□ -0.78
MCPH1-201ENST00000344683 AKAP17AQ02040 695 aaKnown RBP10.16□□□□□ -0.78
MCPH1-201ENST00000344683 NASPP49321 788 aaPredicted RBP10.16□□□□□ -0.78
MCPH1-201ENST00000344683 NUCB2P80303 420 aa10.16□□□□□ -0.78
MCPH1-201ENST00000344683 FOXD4L1Q9NU39 408 aa10.16□□□□□ -0.78
MCPH1-201ENST00000344683 CAVIN1Q6NZI2 390 aaKnown RBP10.16□□□□□ -0.78
MCPH1-201ENST00000344683 TMX4Q9H1E5 349 aaPredicted RBP10.16□□□□□ -0.78
MCPH1-201ENST00000344683 CHMP5Q9NZZ3 219 aa10.16□□□□□ -0.78
MCPH1-201ENST00000344683 PLCD4Q9BRC7 762 aa10.15□□□□□ -0.78
MCPH1-201ENST00000344683 GOLGA6L10A6NI86 522 aa10.15□□□□□ -0.78
MCPH1-201ENST00000344683 R3HCC1Q9Y3T6 440 aaKnown RBP10.15□□□□□ -0.78
MCPH1-201ENST00000344683 UNC13AQ9UPW8 1703 aa10.15□□□□□ -0.78
MCPH1-201ENST00000344683 KANK1Q14678 1352 aa10.14□□□□□ -0.79
MCPH1-201ENST00000344683 REC8O95072 547 aa10.14□□□□□ -0.79
MCPH1-201ENST00000344683 STK31Q9BXU1 1019 aa10.14□□□□□ -0.79
MCPH1-201ENST00000344683 SMC4Q9NTJ3 1288 aa10.14□□□□□ -0.79
MCPH1-201ENST00000344683 TRIM29Q14134 588 aa10.14□□□□□ -0.79
MCPH1-201ENST00000344683 EIF3AQ14152 1382 aaKnown RBP10.14□□□□□ -0.79
MCPH1-201ENST00000344683 EIF3JO75822 258 aaKnown RBP10.14□□□□□ -0.79
MCPH1-201ENST00000344683 ERLIN2O94905 339 aa10.14□□□□□ -0.79
MCPH1-201ENST00000344683 PDE4AP27815 886 aa10.14□□□□□ -0.79
MCPH1-201ENST00000344683 CEP164Q9UPV0 1460 aa10.14□□□□□ -0.79
MCPH1-201ENST00000344683 PLEKHG5O94827 1062 aa10.13□□□□□ -0.79
MCPH1-201ENST00000344683 CENPJQ9HC77 1338 aaPredicted RBP10.13□□□□□ -0.79
MCPH1-201ENST00000344683 ODF2Q5BJF6 829 aa10.13□□□□□ -0.79
MCPH1-201ENST00000344683 CPLX2Q6PUV4 134 aaKnown RBP10.13□□□□□ -0.79
MCPH1-201ENST00000344683 ANKRD18AQ8IVF6 992 aa10.13□□□□□ -0.79
MCPH1-201ENST00000344683 ROCK2O75116 1388 aaKnown RBP10.13□□□□□ -0.79
MCPH1-201ENST00000344683 CGNL1Q0VF96 1302 aa10.13□□□□□ -0.79
MCPH1-201ENST00000344683 TNIKQ9UKE5 1360 aa10.13□□□□□ -0.79
MCPH1-201ENST00000344683 NAP1L1P55209 391 aaKnown RBP10.13□□□□□ -0.79
MCPH1-201ENST00000344683 SYNE3Q6ZMZ3 975 aa10.12□□□□□ -0.79
MCPH1-201ENST00000344683 LMOD3Q0VAK6 560 aa10.12□□□□□ -0.79
MCPH1-201ENST00000344683 FOXD4L5Q5VV16 416 aaPredicted RBP10.12□□□□□ -0.79
MCPH1-201ENST00000344683 GIMAP7Q8NHV1 300 aa10.12□□□□□ -0.79
MCPH1-201ENST00000344683 FOXD4L4Q8WXT5 416 aaPredicted RBP10.12□□□□□ -0.79
MCPH1-201ENST00000344683 RABEP1Q15276 862 aa10.12□□□□□ -0.79
MCPH1-201ENST00000344683 RUFY2Q8WXA3 655 aa10.12□□□□□ -0.79
MCPH1-201ENST00000344683 VPS53Q5VIR6 699 aa10.12□□□□□ -0.79
MCPH1-201ENST00000344683 OLFM4Q6UX06 510 aa10.12□□□□□ -0.79
MCPH1-201ENST00000344683 NOL8Q76FK4 1167 aaKnown RBP10.12□□□□□ -0.79
MCPH1-201ENST00000344683 KIF7Q2M1P5 1343 aa10.11□□□□□ -0.79
MCPH1-201ENST00000344683 CT47B1P0C2W7 299 aaPredicted RBP10.11□□□□□ -0.79
MCPH1-201ENST00000344683 FHAD1B1AJZ9 1412 aa10.11□□□□□ -0.79
MCPH1-201ENST00000344683 CT47A1Q5JQC4 288 aaPredicted RBP10.11□□□□□ -0.79
MCPH1-201ENST00000344683 HDGFP51858 240 aaKnown RBP10.1□□□□□ -0.79
MCPH1-201ENST00000344683 HSP90AB2PQ58FF8 381 aa10.1□□□□□ -0.79
MCPH1-201ENST00000344683 MCTP1Q6DN14 999 aa10.1□□□□□ -0.79
MCPH1-201ENST00000344683 SMARCE1Q969G3 411 aa10.1□□□□□ -0.79
MCPH1-201ENST00000344683 AXDND1Q5T1B0 1012 aaPredicted RBP10.1□□□□□ -0.79
MCPH1-201ENST00000344683 DDX11Q96FC9 970 aa10.1□□□□□ -0.79
MCPH1-201ENST00000344683 CCNB3Q8WWL7 1395 aa10.1□□□□□ -0.79
MCPH1-201ENST00000344683 PLEKHD1A6NEE1 506 aa10.1□□□□□ -0.79
MCPH1-201ENST00000344683 BICD2Q8TD16 824 aa10.1□□□□□ -0.79
MCPH1-201ENST00000344683 HDGFL2Q7Z4V5 671 aaPredicted RBP10.1□□□□□ -0.79
MCPH1-201ENST00000344683 TCEAL9Q9UHQ7 104 aa10.1□□□□□ -0.79
MCPH1-201ENST00000344683 TXLNBQ8N3L3 684 aa10.1□□□□□ -0.79
MCPH1-201ENST00000344683 EPS15P42566 896 aa10.09□□□□□ -0.79
MCPH1-201ENST00000344683 PDCL2Q8N4E4 241 aa10.09□□□□□ -0.79
MCPH1-201ENST00000344683 MEX3CQ5U5Q3 659 aaKnown RBP10.09□□□□□ -0.79
MCPH1-201ENST00000344683 IQCEQ6IPM2 695 aa10.09□□□□□ -0.79
MCPH1-201ENST00000344683 SETD5Q9C0A6 1442 aa10.08□□□□□ -0.8
MCPH1-201ENST00000344683 CLASRPQ8N2M8 674 aaKnown RBP10.08□□□□□ -0.8
MCPH1-201ENST00000344683 ERLIN1O75477 346 aa10.08□□□□□ -0.8
MCPH1-201ENST00000344683 RNF20Q5VTR2 975 aa10.08□□□□□ -0.8
MCPH1-201ENST00000344683 ROCK1Q13464 1354 aa10.08□□□□□ -0.8
MCPH1-201ENST00000344683 ZKSCAN1P17029 563 aaPredicted RBP10.08□□□□□ -0.8
MCPH1-201ENST00000344683 CFDP1Q9UEE9 299 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms