RNA–Protein interactions for RNA: ENST00000343529.9

RELN-201, Transcript of reelin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RELN, Length 11,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELN-201ENST00000343529 LMOD3Q0VAK6 560 aa12.81□□□□□ -0.36
RELN-201ENST00000343529 ATF3P18847 181 aa12.81□□□□□ -0.36
RELN-201ENST00000343529 CT47A1Q5JQC4 288 aaPredicted RBP12.81□□□□□ -0.36
RELN-201ENST00000343529 TMEM132AQ24JP5 1023 aa12.81□□□□□ -0.36
RELN-201ENST00000343529 CCDC180Q9P1Z9 1646 aa12.81□□□□□ -0.36
RELN-201ENST00000343529 CPLX2Q6PUV4 134 aaKnown RBP12.8□□□□□ -0.36
RELN-201ENST00000343529 HMGB2P26583 209 aaKnown RBP12.79□□□□□ -0.36
RELN-201ENST00000343529 SLC4A10Q6U841 1118 aa12.79□□□□□ -0.36
RELN-201ENST00000343529 KIF16BQ96L93 1317 aa12.79□□□□□ -0.36
RELN-201ENST00000343529 RDXP35241 583 aaKnown RBP12.79□□□□□ -0.36
RELN-201ENST00000343529 U2AF1L5P0DN76 240 aaPredicted RBP12.78□□□□□ -0.36
RELN-201ENST00000343529 U2AF1Q01081 240 aaKnown RBP eCLIP12.78□□□□□ -0.363e-9■■□□□ 12.3
RELN-201ENST00000343529 KIF27Q86VH2 1401 aa12.78□□□□□ -0.36
RELN-201ENST00000343529 WASHC2CQ9Y4E1 1318 aa12.78□□□□□ -0.36
RELN-201ENST00000343529 PPM1FP49593 454 aaPredicted RBP12.77□□□□□ -0.36
RELN-201ENST00000343529 PSME1Q06323 249 aa12.77□□□□□ -0.36
RELN-201ENST00000343529 TRIM29Q14134 588 aa12.77□□□□□ -0.37
RELN-201ENST00000343529 VSIG10Q8N0Z9 540 aa12.77□□□□□ -0.37
RELN-201ENST00000343529 ERICH2A1L162 156 aa12.77□□□□□ -0.37
RELN-201ENST00000343529 H3BQV1 296 aa12.77□□□□□ -0.37
RELN-201ENST00000343529 IPO7O95373 1038 aaKnown RBP12.77□□□□□ -0.37
RELN-201ENST00000343529 IKQ13123 557 aaPredicted RBP12.77□□□□□ -0.37
RELN-201ENST00000343529 IFFO2Q5TF58 517 aa12.77□□□□□ -0.37
RELN-201ENST00000343529 TEFQ10587 303 aa12.76□□□□□ -0.37
RELN-201ENST00000343529 RRP12Q5JTH9 1297 aaKnown RBP12.76□□□□□ -0.37
RELN-201ENST00000343529 ANKRD20A12PQ8NF67 263 aa12.76□□□□□ -0.37
RELN-201ENST00000343529 GBP4Q96PP9 640 aa12.75□□□□□ -0.37
RELN-201ENST00000343529 APPP05067 770 aa12.75□□□□□ -0.37
RELN-201ENST00000343529 ITPRIPQ8IWB1 547 aa12.75□□□□□ -0.37
RELN-201ENST00000343529 PHF14O94880 888 aa12.75□□□□□ -0.37
RELN-201ENST00000343529 TMEM87AQ8NBN3 555 aa12.75□□□□□ -0.37
RELN-201ENST00000343529 NUTM2FA1L443 756 aa12.75□□□□□ -0.37
RELN-201ENST00000343529 FAM184AQ8NB25 1140 aa12.74□□□□□ -0.37
RELN-201ENST00000343529 PCMTD1Q96MG8 357 aaPredicted RBP12.74□□□□□ -0.37
RELN-201ENST00000343529 EFCAB2Q5VUJ9 269 aa12.74□□□□□ -0.37
RELN-201ENST00000343529 SETQ01105 290 aaPredicted RBP12.74□□□□□ -0.37
RELN-201ENST00000343529 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
RELN-201ENST00000343529 HOOK1Q9UJC3 728 aaKnown RBP12.73□□□□□ -0.37
RELN-201ENST00000343529 ZFYVE27Q5T4F4 411 aa12.73□□□□□ -0.37
RELN-201ENST00000343529 SENP3-EIF4A1A0A087X0R7 540 aa12.73□□□□□ -0.37
RELN-201ENST00000343529 TRDNQ13061 729 aa12.73□□□□□ -0.37
RELN-201ENST00000343529 TNNT3P45378 269 aaPredicted RBP12.73□□□□□ -0.37
RELN-201ENST00000343529 EPS15P42566 896 aa12.72□□□□□ -0.37
RELN-201ENST00000343529 FHAD1B1AJZ9 1412 aa12.72□□□□□ -0.37
RELN-201ENST00000343529 CCDC97Q96F63 343 aaPredicted RBP12.71□□□□□ -0.38
RELN-201ENST00000343529 TRIM21P19474 475 aaKnown RBP12.7□□□□□ -0.38
RELN-201ENST00000343529 NGEFQ8N5V2 710 aa12.7□□□□□ -0.38
RELN-201ENST00000343529 C9orf78Q9NZ63 289 aaPredicted RBP12.7□□□□□ -0.38
RELN-201ENST00000343529 DDX58O95786 925 aaKnown RBP12.69□□□□□ -0.38
RELN-201ENST00000343529 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.69□□□□□ -0.385e-7■■■■□ 22
RELN-201ENST00000343529 PAXIP1Q6ZW49 1069 aaPredicted RBP12.68□□□□□ -0.38
RELN-201ENST00000343529 RWDD1Q9H446 243 aaPredicted RBP12.68□□□□□ -0.38
RELN-201ENST00000343529 SPRYD3Q8NCJ5 442 aa12.68□□□□□ -0.38
RELN-201ENST00000343529 SUPT16HQ9Y5B9 1047 aaKnown RBP12.68□□□□□ -0.38
RELN-201ENST00000343529 GOLGA6L19H0YKK7 550 aa12.68□□□□□ -0.38
RELN-201ENST00000343529 KIF3BO15066 747 aa12.68□□□□□ -0.38
RELN-201ENST00000343529 ROCK2O75116 1388 aaKnown RBP12.67□□□□□ -0.38
RELN-201ENST00000343529 KTN1Q86UP2 1357 aaKnown RBP12.67□□□□□ -0.38
RELN-201ENST00000343529 B4GALNT3Q6L9W6 998 aa12.67□□□□□ -0.38
RELN-201ENST00000343529 GOLGA3Q08378 1498 aa12.66□□□□□ -0.38
RELN-201ENST00000343529 CYB5RLQ6IPT4 315 aa12.66□□□□□ -0.38
RELN-201ENST00000343529 ST18O60284 1047 aa12.65□□□□□ -0.38
RELN-201ENST00000343529 MAP3K9P80192 1104 aa12.65□□□□□ -0.38
RELN-201ENST00000343529 CEP162Q5TB80 1403 aa12.65□□□□□ -0.38
RELN-201ENST00000343529 CCDC173Q0VFZ6 552 aa12.64□□□□□ -0.39
RELN-201ENST00000343529 BRMS1Q9HCU9 246 aa12.64□□□□□ -0.39
RELN-201ENST00000343529 HSP90AB2PQ58FF8 381 aa12.64□□□□□ -0.39
RELN-201ENST00000343529 GPS2Q13227 327 aa12.64□□□□□ -0.39
RELN-201ENST00000343529 ATP6V1DQ9Y5K8 247 aa12.64□□□□□ -0.39
RELN-201ENST00000343529 PMFBP1Q8TBY8 1022 aa12.64□□□□□ -0.39
RELN-201ENST00000343529 CPLX1O14810 134 aa12.64□□□□□ -0.39
RELN-201ENST00000343529 COG3Q96JB2 828 aa12.64□□□□□ -0.39
RELN-201ENST00000343529 WDR70Q9NW82 654 aa12.64□□□□□ -0.39
RELN-201ENST00000343529 CCDC27Q2M243 656 aa12.64□□□□□ -0.39
RELN-201ENST00000343529 SLC4A3P48751 1232 aa12.63□□□□□ -0.39
RELN-201ENST00000343529 NFXL1Q6ZNB6 911 aa12.63□□□□□ -0.39
RELN-201ENST00000343529 TCERG1O14776 1098 aaKnown RBP12.63□□□□□ -0.39
RELN-201ENST00000343529 ZRSR2Q15696 482 aaKnown RBP12.63□□□□□ -0.39
RELN-201ENST00000343529 RAPGEF4Q8WZA2 1011 aa12.62□□□□□ -0.39
RELN-201ENST00000343529 DNAI2Q9GZS0 605 aa12.62□□□□□ -0.39
RELN-201ENST00000343529 PATL2C9JE40 543 aaKnown RBP12.62□□□□□ -0.39
RELN-201ENST00000343529 MCTP1Q6DN14 999 aa12.62□□□□□ -0.39
RELN-201ENST00000343529 XBP1P17861 261 aa12.62□□□□□ -0.39
RELN-201ENST00000343529 WRNQ14191 1432 aaPredicted RBP eCLIP12.62□□□□□ -0.39
RELN-201ENST00000343529 DESP17661 470 aa12.62□□□□□ -0.39
RELN-201ENST00000343529 CDR1P51861 262 aa12.61□□□□□ -0.39
RELN-201ENST00000343529 SLC3A2P08195 630 aaKnown RBP12.61□□□□□ -0.39
RELN-201ENST00000343529 SAFBQ15424 915 aaKnown RBP eCLIP12.61□□□□□ -0.39
RELN-201ENST00000343529 RUFY2Q8WXA3 655 aa12.61□□□□□ -0.39
RELN-201ENST00000343529 SYCP1Q15431 976 aa12.61□□□□□ -0.39
RELN-201ENST00000343529 BECN2A8MW95 431 aa12.6□□□□□ -0.39
RELN-201ENST00000343529 CCAR2Q8N163 923 aaKnown RBP12.6□□□□□ -0.39
RELN-201ENST00000343529 EEA1Q15075 1411 aa12.6□□□□□ -0.39
RELN-201ENST00000343529 PDS5BQ9NTI5 1447 aa12.6□□□□□ -0.39
RELN-201ENST00000343529 MYO6Q9UM54 1294 aa12.6□□□□□ -0.39
RELN-201ENST00000343529 UACAQ9BZF9 1416 aa12.6□□□□□ -0.39
RELN-201ENST00000343529 OFD1O75665 1012 aa12.6□□□□□ -0.39
RELN-201ENST00000343529 MPHOSPH10O00566 681 aaKnown RBP12.59□□□□□ -0.39
RELN-201ENST00000343529 RILPL2Q969X0 211 aa12.59□□□□□ -0.39
RELN-201ENST00000343529 NAP1L1P55209 391 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms