RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 FANCIQ9NVI1 1328 aa21.18■□□□□ 0.98
RDX-201ENST00000343115 RRP7AQ9Y3A4 280 aaKnown RBP21.18■□□□□ 0.98
RDX-201ENST00000343115 MAPK8IP3Q9UPT6 1336 aa21.17■□□□□ 0.98
RDX-201ENST00000343115 ARID4BQ4LE39 1312 aaPredicted RBP21.17■□□□□ 0.98
RDX-201ENST00000343115 CLUAP1Q96AJ1 413 aa21.17■□□□□ 0.98
RDX-201ENST00000343115 MIA2Q96PC5 1412 aa21.17■□□□□ 0.98
RDX-201ENST00000343115 DAPK1P53355 1430 aa21.16■□□□□ 0.98
RDX-201ENST00000343115 BECN1Q14457 450 aa21.16■□□□□ 0.98
RDX-201ENST00000343115 U2AF1L5P0DN76 240 aaPredicted RBP21.15■□□□□ 0.98
RDX-201ENST00000343115 SLC4A3P48751 1232 aa21.15■□□□□ 0.98
RDX-201ENST00000343115 U2AF1Q01081 240 aaKnown RBP eCLIP21.15■□□□□ 0.986e-6■■■■□ 22.1
RDX-201ENST00000343115 PDE4AP27815 886 aa21.15■□□□□ 0.98
RDX-201ENST00000343115 PNISRQ8TF01 805 aaKnown RBP21.14■□□□□ 0.97
RDX-201ENST00000343115 SUPT6HQ7KZ85 1726 aaKnown RBP21.14■□□□□ 0.97
RDX-201ENST00000343115 APAF1O14727 1248 aa21.13■□□□□ 0.97
RDX-201ENST00000343115 SPRYD3Q8NCJ5 442 aa21.13■□□□□ 0.97
RDX-201ENST00000343115 ANKRD30BQ9BXX2 1392 aa21.12■□□□□ 0.97
RDX-201ENST00000343115 TRHP20396 242 aaPredicted RBP21.11■□□□□ 0.97
RDX-201ENST00000343115 BCL2L13Q9BXK5 485 aa21.11■□□□□ 0.97
RDX-201ENST00000343115 AFAP1Q8N556 730 aa21.1■□□□□ 0.97
RDX-201ENST00000343115 KIAA1107Q9UPP5 1409 aa21.1■□□□□ 0.97
RDX-201ENST00000343115 TROQ12816 1431 aaPredicted RBP21.09■□□□□ 0.97
RDX-201ENST00000343115 PTPN23Q9H3S7 1636 aa21.09■□□□□ 0.97
RDX-201ENST00000343115 ADAMTS8Q9UP79 889 aa21.08■□□□□ 0.96
RDX-201ENST00000343115 KIAA0586Q9BVV6 1533 aa21.06■□□□□ 0.96
RDX-201ENST00000343115 ABCC5O15440 1437 aa21.06■□□□□ 0.96
RDX-201ENST00000343115 PLB1Q6P1J6 1458 aa21.06■□□□□ 0.96
RDX-201ENST00000343115 SOX12O15370 315 aa21.06■□□□□ 0.96
RDX-201ENST00000343115 SLKQ9H2G2 1235 aaPredicted RBP21.05■□□□□ 0.96
RDX-201ENST00000343115 MYH16Q9H6N6 1097 aa21.04■□□□□ 0.96
RDX-201ENST00000343115 HECW1Q76N89 1606 aa21.04■□□□□ 0.96
RDX-201ENST00000343115 GRIN2AQ12879 1464 aa21.04■□□□□ 0.96
RDX-201ENST00000343115 C9orf84Q5VXU9 1444 aa21.04■□□□□ 0.96
RDX-201ENST00000343115 MSH5O43196 834 aa21.03■□□□□ 0.96
RDX-201ENST00000343115 PAK3O75914 559 aaPredicted RBP21.03■□□□□ 0.96
RDX-201ENST00000343115 KIF21AQ7Z4S6 1674 aa21.03■□□□□ 0.96
RDX-201ENST00000343115 IQGAP2Q13576 1575 aa21.02■□□□□ 0.96
RDX-201ENST00000343115 WASHC2CQ9Y4E1 1318 aa21■□□□□ 0.95
RDX-201ENST00000343115 COG6Q9Y2V7 657 aa21■□□□□ 0.95
RDX-201ENST00000343115 CUL7Q14999 1698 aa21■□□□□ 0.95
RDX-201ENST00000343115 BRD4O60885 1362 aaPredicted RBP21■□□□□ 0.95
RDX-201ENST00000343115 CENPJQ9HC77 1338 aaPredicted RBP20.99■□□□□ 0.95
RDX-201ENST00000343115 ZBTB7CA1YPR0 619 aa20.99■□□□□ 0.95
RDX-201ENST00000343115 C14orf37Q86TY3 774 aa20.99■□□□□ 0.95
RDX-201ENST00000343115 SYNJ2O15056 1496 aa20.99■□□□□ 0.95
RDX-201ENST00000343115 EIF3AQ14152 1382 aaKnown RBP20.97■□□□□ 0.95
RDX-201ENST00000343115 CFAP70Q5T0N1 1121 aa20.97■□□□□ 0.95
RDX-201ENST00000343115 ROCK1Q13464 1354 aa20.96■□□□□ 0.95
RDX-201ENST00000343115 SKAP1Q86WV1 359 aa20.96■□□□□ 0.95
RDX-201ENST00000343115 NCOA1Q15788 1441 aa20.95■□□□□ 0.95
RDX-201ENST00000343115 ITPRIPQ8IWB1 547 aa20.94■□□□□ 0.94
RDX-201ENST00000343115 THOC2Q8NI27 1593 aaKnown RBP20.94■□□□□ 0.94
RDX-201ENST00000343115 TMEM132EQ6IEE7 984 aa20.94■□□□□ 0.94
RDX-201ENST00000343115 SMC4Q9NTJ3 1288 aa20.92■□□□□ 0.94
RDX-201ENST00000343115 ARHGEF11O15085 1522 aa20.92■□□□□ 0.94
RDX-201ENST00000343115 RPRD2Q5VT52 1461 aaKnown RBP20.92■□□□□ 0.94
RDX-201ENST00000343115 ANP32BQ92688 251 aaKnown RBP20.92■□□□□ 0.94
RDX-201ENST00000343115 CENPQQ7L2Z9 268 aaPredicted RBP20.91■□□□□ 0.94
RDX-201ENST00000343115 PPP2R1AP30153 589 aa20.9■□□□□ 0.94
RDX-201ENST00000343115 APBB1O00213 710 aa20.89■□□□□ 0.94
RDX-201ENST00000343115 CAMSAP2Q08AD1 1489 aa20.89■□□□□ 0.93
RDX-201ENST00000343115 ARHGAP5Q13017 1502 aa20.89■□□□□ 0.93
RDX-201ENST00000343115 MAGI1Q96QZ7 1491 aaPredicted RBP20.89■□□□□ 0.93
RDX-201ENST00000343115 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.88■□□□□ 0.93
RDX-201ENST00000343115 SMG6Q86US8 1419 aaKnown RBP20.88■□□□□ 0.93
RDX-201ENST00000343115 E9PSI1 815 aa20.87■□□□□ 0.93
RDX-201ENST00000343115 MS4A1P11836 297 aa20.87■□□□□ 0.93
RDX-201ENST00000343115 RWDD1Q9H446 243 aaPredicted RBP20.87■□□□□ 0.93
RDX-201ENST00000343115 ELL2O00472 640 aaPredicted RBP20.87■□□□□ 0.93
RDX-201ENST00000343115 FAM161AQ3B820 660 aa20.87■□□□□ 0.93
RDX-201ENST00000343115 NCLP19338 710 aaKnown RBP20.86■□□□□ 0.93
RDX-201ENST00000343115 PANK1Q8TE04 598 aa20.86■□□□□ 0.93
RDX-201ENST00000343115 GZF1Q9H116 711 aaPredicted RBP20.86■□□□□ 0.93
RDX-201ENST00000343115 FAM69CQ0P6D2 419 aa20.86■□□□□ 0.93
RDX-201ENST00000343115 HDGFL2Q7Z4V5 671 aaPredicted RBP20.86■□□□□ 0.93
RDX-201ENST00000343115 MFAP1P55081 439 aaKnown RBP20.85■□□□□ 0.93
RDX-201ENST00000343115 TPRNQ4KMQ1 711 aa20.85■□□□□ 0.93
RDX-201ENST00000343115 NUTM2FA1L443 756 aa20.84■□□□□ 0.93
RDX-201ENST00000343115 MINK1Q8N4C8 1332 aaPredicted RBP20.84■□□□□ 0.93
RDX-201ENST00000343115 UGGT2Q9NYU1 1516 aa20.83■□□□□ 0.93
RDX-201ENST00000343115 HSP90AB1P08238 724 aaKnown RBP20.82■□□□□ 0.92
RDX-201ENST00000343115 BCAR3O75815 825 aa20.82■□□□□ 0.92
RDX-201ENST00000343115 PMFBP1Q8TBY8 1022 aa20.8■□□□□ 0.92
RDX-201ENST00000343115 SLC12A5Q9H2X9 1139 aa20.8■□□□□ 0.92
RDX-201ENST00000343115 C20orf194Q5TEA3 1177 aa20.79■□□□□ 0.92
RDX-201ENST00000343115 TERF2IPQ9NYB0 399 aa20.79■□□□□ 0.92
RDX-201ENST00000343115 PNNQ9H307 717 aaKnown RBP20.78■□□□□ 0.92
RDX-201ENST00000343115 CGNL1Q0VF96 1302 aa20.78■□□□□ 0.92
RDX-201ENST00000343115 HSCBQ8IWL3 235 aa20.78■□□□□ 0.92
RDX-201ENST00000343115 IPO8O15397 1037 aaKnown RBP20.77■□□□□ 0.92
RDX-201ENST00000343115 MTHFSP49914 203 aa20.77■□□□□ 0.92
RDX-201ENST00000343115 GGNBP2Q9H3C7 697 aa20.76■□□□□ 0.91
RDX-201ENST00000343115 CFAP43Q8NDM7 1665 aa20.76■□□□□ 0.91
RDX-201ENST00000343115 CABP2Q9NPB3 220 aa20.76■□□□□ 0.91
RDX-201ENST00000343115 RAPGEF3O95398 923 aa20.75■□□□□ 0.91
RDX-201ENST00000343115 GPATCH8Q9UKJ3 1502 aaKnown RBP20.75■□□□□ 0.91
RDX-201ENST00000343115 ERBINQ96RT1 1412 aa20.75■□□□□ 0.91
RDX-201ENST00000343115 TCP11L2Q8N4U5 519 aa20.75■□□□□ 0.91
RDX-201ENST00000343115 BACH2Q9BYV9 841 aa20.74■□□□□ 0.91
RDX-201ENST00000343115 VGFO15240 615 aaPredicted RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms