RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 HSCBQ8IWL3 235 aa9.15□□□□□ -0.94
VCAN-202ENST00000342785 SMC4Q9NTJ3 1288 aa9.15□□□□□ -0.94
VCAN-202ENST00000342785 MIA2Q96PC5 1412 aa9.15□□□□□ -0.94
VCAN-202ENST00000342785 TERF2IPQ9NYB0 399 aa9.15□□□□□ -0.94
VCAN-202ENST00000342785 BICRAQ9NZM4 1560 aa9.14□□□□□ -0.95
VCAN-202ENST00000342785 EFCAB5A4FU69 1503 aa9.14□□□□□ -0.95
VCAN-202ENST00000342785 PMFBP1Q8TBY8 1022 aa9.14□□□□□ -0.95
VCAN-202ENST00000342785 WDR97A6NE52 1622 aa9.14□□□□□ -0.95
VCAN-202ENST00000342785 GRIN2BQ13224 1484 aa9.14□□□□□ -0.95
VCAN-202ENST00000342785 HAP1P54257 671 aaPredicted RBP9.14□□□□□ -0.95
VCAN-202ENST00000342785 NBPF1Q3BBV0 1214 aa9.14□□□□□ -0.95
VCAN-202ENST00000342785 CENPQQ7L2Z9 268 aaPredicted RBP9.14□□□□□ -0.95
VCAN-202ENST00000342785 BCL2L13Q9BXK5 485 aa9.14□□□□□ -0.95
VCAN-202ENST00000342785 HDGFP51858 240 aaKnown RBP9.14□□□□□ -0.95
VCAN-202ENST00000342785 E9PSI1 815 aa9.14□□□□□ -0.95
VCAN-202ENST00000342785 PNISRQ8TF01 805 aaKnown RBP9.13□□□□□ -0.95
VCAN-202ENST00000342785 CDCA7LQ96GN5 454 aa9.12□□□□□ -0.95
VCAN-202ENST00000342785 COG6Q9Y2V7 657 aa9.12□□□□□ -0.95
VCAN-202ENST00000342785 BRD4O60885 1362 aaPredicted RBP9.12□□□□□ -0.95
VCAN-202ENST00000342785 SLC4A3P48751 1232 aa9.12□□□□□ -0.95
VCAN-202ENST00000342785 LMOD2Q6P5Q4 547 aa9.12□□□□□ -0.95
VCAN-202ENST00000342785 CGNL1Q0VF96 1302 aa9.12□□□□□ -0.95
VCAN-202ENST00000342785 PRG4Q92954 1404 aaPredicted RBP9.12□□□□□ -0.95
VCAN-202ENST00000342785 FAM161AQ3B820 660 aa9.12□□□□□ -0.95
VCAN-202ENST00000342785 C11orf95C9JLR9 678 aaPredicted RBP9.11□□□□□ -0.95
VCAN-202ENST00000342785 APBB1O00213 710 aa9.11□□□□□ -0.95
VCAN-202ENST00000342785 STAC3Q96MF2 364 aa9.11□□□□□ -0.95
VCAN-202ENST00000342785 ADAMTS8Q9UP79 889 aa9.11□□□□□ -0.95
VCAN-202ENST00000342785 AFAP1Q8N556 730 aa9.11□□□□□ -0.95
VCAN-202ENST00000342785 CALD1Q05682 793 aaKnown RBP9.11□□□□□ -0.95
VCAN-202ENST00000342785 GLIPR1L2Q4G1C9 344 aa9.11□□□□□ -0.95
VCAN-202ENST00000342785 VGFO15240 615 aaPredicted RBP9.1□□□□□ -0.95
VCAN-202ENST00000342785 NGEFQ8N5V2 710 aa9.1□□□□□ -0.95
VCAN-202ENST00000342785 DNAJC5BQ9UF47 199 aa9.1□□□□□ -0.95
VCAN-202ENST00000342785 KIAA1107Q9UPP5 1409 aa9.1□□□□□ -0.95
VCAN-202ENST00000342785 MFAP1P55081 439 aaKnown RBP9.1□□□□□ -0.95
VCAN-202ENST00000342785 TROQ12816 1431 aaPredicted RBP9.1□□□□□ -0.95
VCAN-202ENST00000342785 ABCA10Q8WWZ4 1543 aa9.09□□□□□ -0.95
VCAN-202ENST00000342785 USP35Q9P2H5 1018 aa9.09□□□□□ -0.95
VCAN-202ENST00000342785 TPRNQ4KMQ1 711 aa9.09□□□□□ -0.95
VCAN-202ENST00000342785 RTF1Q92541 710 aaKnown RBP9.08□□□□□ -0.96
VCAN-202ENST00000342785 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.08□□□□□ -0.96
VCAN-202ENST00000342785 EHBP1L1Q8N3D4 1523 aa9.08□□□□□ -0.96
VCAN-202ENST00000342785 L1TD1Q5T7N2 865 aaKnown RBP9.08□□□□□ -0.96
VCAN-202ENST00000342785 CFAP70Q5T0N1 1121 aa9.08□□□□□ -0.96
VCAN-202ENST00000342785 GZF1Q9H116 711 aaPredicted RBP9.08□□□□□ -0.96
VCAN-202ENST00000342785 MAP3K1Q13233 1512 aa9.08□□□□□ -0.96
VCAN-202ENST00000342785 ELL2O00472 640 aaPredicted RBP9.08□□□□□ -0.96
VCAN-202ENST00000342785 PTMAP06454 111 aaKnown RBP9.08□□□□□ -0.96
VCAN-202ENST00000342785 ZKSCAN2Q63HK3 967 aa9.07□□□□□ -0.96
VCAN-202ENST00000342785 EVC2Q86UK5 1308 aa9.07□□□□□ -0.96
VCAN-202ENST00000342785 PEG3Q9GZU2 1588 aa9.07□□□□□ -0.96
VCAN-202ENST00000342785 OS9Q13438 667 aaPredicted RBP9.07□□□□□ -0.96
VCAN-202ENST00000342785 ANKRD30BQ9BXX2 1392 aa9.07□□□□□ -0.96
VCAN-202ENST00000342785 DAPK1P53355 1430 aa9.06□□□□□ -0.96
VCAN-202ENST00000342785 AKNAQ7Z591 1439 aa9.06□□□□□ -0.96
VCAN-202ENST00000342785 MINK1Q8N4C8 1332 aaPredicted RBP9.06□□□□□ -0.96
VCAN-202ENST00000342785 PPP2R1AP30153 589 aa9.06□□□□□ -0.96
VCAN-202ENST00000342785 NAP1L5Q96NT1 182 aaPredicted RBP9.06□□□□□ -0.96
VCAN-202ENST00000342785 CFAP44Q96MT7 982 aa9.05□□□□□ -0.96
VCAN-202ENST00000342785 EPRSP07814 1512 aaKnown RBP9.05□□□□□ -0.96
VCAN-202ENST00000342785 C9orf84Q5VXU9 1444 aa9.05□□□□□ -0.96
VCAN-202ENST00000342785 ROCK1Q13464 1354 aa9.05□□□□□ -0.96
VCAN-202ENST00000342785 TMEM132EQ6IEE7 984 aa9.04□□□□□ -0.96
VCAN-202ENST00000342785 DNMBPQ6XZF7 1577 aa9.04□□□□□ -0.96
VCAN-202ENST00000342785 A0A0G2JS52 829 aa9.04□□□□□ -0.96
VCAN-202ENST00000342785 NUTM2FA1L443 756 aa9.04□□□□□ -0.96
VCAN-202ENST00000342785 GBP4Q96PP9 640 aa9.04□□□□□ -0.96
VCAN-202ENST00000342785 KCNJ4P48050 445 aa9.04□□□□□ -0.96
VCAN-202ENST00000342785 RUNDC1Q96C34 613 aa9.04□□□□□ -0.96
VCAN-202ENST00000342785 CDK13Q14004 1512 aaKnown RBP9.03□□□□□ -0.96
VCAN-202ENST00000342785 LMOD3Q0VAK6 560 aa9.03□□□□□ -0.96
VCAN-202ENST00000342785 KIAA0586Q9BVV6 1533 aa9.03□□□□□ -0.96
VCAN-202ENST00000342785 PLCB2Q00722 1185 aa9.03□□□□□ -0.96
VCAN-202ENST00000342785 DZIP1LQ8IYY4 767 aaKnown RBP9.03□□□□□ -0.96
VCAN-202ENST00000342785 TCP11L2Q8N4U5 519 aa9.03□□□□□ -0.96
VCAN-202ENST00000342785 PANK1Q8TE04 598 aa9.03□□□□□ -0.96
VCAN-202ENST00000342785 STK31Q9BXU1 1019 aa9.03□□□□□ -0.96
VCAN-202ENST00000342785 PCF11O94913 1555 aaKnown RBP9.02□□□□□ -0.96
VCAN-202ENST00000342785 SYNJ2O15056 1496 aa9.02□□□□□ -0.97
VCAN-202ENST00000342785 MCCP23508 829 aa9.02□□□□□ -0.97
VCAN-202ENST00000342785 MTHFSP49914 203 aa9.02□□□□□ -0.97
VCAN-202ENST00000342785 IFT140Q96RY7 1462 aa9.02□□□□□ -0.97
VCAN-202ENST00000342785 CC2D2AQ9P2K1 1620 aa9.02□□□□□ -0.97
VCAN-202ENST00000342785 SMG6Q86US8 1419 aaKnown RBP9.02□□□□□ -0.97
VCAN-202ENST00000342785 DIAPH1O60610 1272 aaKnown RBP9.01□□□□□ -0.97
VCAN-202ENST00000342785 GSE1Q14687 1217 aa9.01□□□□□ -0.97
VCAN-202ENST00000342785 ABCC5O15440 1437 aa9.01□□□□□ -0.97
VCAN-202ENST00000342785 PAK3O75914 559 aaPredicted RBP9.01□□□□□ -0.97
VCAN-202ENST00000342785 SLC4A10Q6U841 1118 aa9.01□□□□□ -0.97
VCAN-202ENST00000342785 GGNBP2Q9H3C7 697 aa9.01□□□□□ -0.97
VCAN-202ENST00000342785 MRC2Q9UBG0 1479 aa9.01□□□□□ -0.97
VCAN-202ENST00000342785 RIPK4P57078 832 aa9.01□□□□□ -0.97
VCAN-202ENST00000342785 DNTTIP2Q5QJE6 756 aaKnown RBP9.01□□□□□ -0.97
VCAN-202ENST00000342785 HMMRO75330 724 aa9.01□□□□□ -0.97
VCAN-202ENST00000342785 DDX19BQ9UMR2 479 aa9.01□□□□□ -0.97
VCAN-202ENST00000342785 PTPRKQ15262 1439 aa9□□□□□ -0.97
VCAN-202ENST00000342785 ANKRD45Q5TZF3 282 aa9□□□□□ -0.97
VCAN-202ENST00000342785 SLC12A5Q9H2X9 1139 aa9□□□□□ -0.97
VCAN-202ENST00000342785 FGD1P98174 961 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms