RNA–Protein interactions for RNA: ENST00000341807.8

COL22A1-202, Transcript of collagen type XXII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL22A1, Length 3,584 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1-202ENST00000341807 WDR43Q15061 677 aaKnown RBP eCLIP17.46■□□□□ 0.39
COL22A1-202ENST00000341807 PBRM1Q86U86 1689 aa17.46■□□□□ 0.38
COL22A1-202ENST00000341807 KIAA0556O60303 1618 aa17.45■□□□□ 0.38
COL22A1-202ENST00000341807 RAPGEF6Q8TEU7 1601 aa17.44■□□□□ 0.38
COL22A1-202ENST00000341807 CCDC144AA2RUR9 1427 aa17.44■□□□□ 0.38
COL22A1-202ENST00000341807 TMF1P82094 1093 aa17.43■□□□□ 0.38
COL22A1-202ENST00000341807 BRD4O60885 1362 aaPredicted RBP17.43■□□□□ 0.38
COL22A1-202ENST00000341807 KNSTRNQ9Y448 316 aa17.42■□□□□ 0.38
COL22A1-202ENST00000341807 PDE4AP27815 886 aa17.41■□□□□ 0.38
COL22A1-202ENST00000341807 CRBNQ96SW2 442 aa17.41■□□□□ 0.38
COL22A1-202ENST00000341807 TCERG1O14776 1098 aaKnown RBP17.39■□□□□ 0.37
COL22A1-202ENST00000341807 PTPRGP23470 1445 aa17.38■□□□□ 0.37
COL22A1-202ENST00000341807 KIF14Q15058 1648 aa17.38■□□□□ 0.37
COL22A1-202ENST00000341807 NEFMP07197 916 aa17.38■□□□□ 0.37
COL22A1-202ENST00000341807 RGS3P49796 1198 aa17.36■□□□□ 0.37
COL22A1-202ENST00000341807 PDE3BQ13370 1112 aa17.36■□□□□ 0.37
COL22A1-202ENST00000341807 CCDC146Q8IYE0 955 aa17.36■□□□□ 0.37
COL22A1-202ENST00000341807 BCORL1Q5H9F3 1711 aa17.35■□□□□ 0.37
COL22A1-202ENST00000341807 ADAMTS8Q9UP79 889 aa17.35■□□□□ 0.37
COL22A1-202ENST00000341807 MAGI1Q96QZ7 1491 aaPredicted RBP17.35■□□□□ 0.37
COL22A1-202ENST00000341807 CHGAP10645 457 aaKnown RBP17.34■□□□□ 0.37
COL22A1-202ENST00000341807 RNF123Q5XPI4 1314 aa17.34■□□□□ 0.37
COL22A1-202ENST00000341807 RALGAPBQ86X10 1494 aa17.34■□□□□ 0.37
COL22A1-202ENST00000341807 SLC4A3P48751 1232 aa17.34■□□□□ 0.37
COL22A1-202ENST00000341807 SENP3Q9H4L4 574 aaPredicted RBP17.33■□□□□ 0.37
COL22A1-202ENST00000341807 RTN4Q9NQC3 1192 aaKnown RBP17.33■□□□□ 0.36
COL22A1-202ENST00000341807 ATP10BO94823 1461 aa17.33■□□□□ 0.36
COL22A1-202ENST00000341807 CANXP27824 592 aaKnown RBP17.32■□□□□ 0.36
COL22A1-202ENST00000341807 C20orf194Q5TEA3 1177 aa17.31■□□□□ 0.36
COL22A1-202ENST00000341807 NEUROD2Q15784 382 aa17.3■□□□□ 0.36
COL22A1-202ENST00000341807 TNNT2P45379 298 aaPredicted RBP17.3■□□□□ 0.36
COL22A1-202ENST00000341807 DISP3Q9P2K9 1392 aa17.3■□□□□ 0.36
COL22A1-202ENST00000341807 SYNJ2O15056 1496 aa17.3■□□□□ 0.36
COL22A1-202ENST00000341807 MBD5Q9P267 1494 aa17.29■□□□□ 0.36
COL22A1-202ENST00000341807 RSPH4AQ5TD94 716 aa17.29■□□□□ 0.36
COL22A1-202ENST00000341807 PER1O15534 1290 aaPredicted RBP17.28■□□□□ 0.36
COL22A1-202ENST00000341807 ADGRL2O95490 1459 aa17.28■□□□□ 0.36
COL22A1-202ENST00000341807 LRPPRCP42704 1394 aaKnown RBP17.28■□□□□ 0.36
COL22A1-202ENST00000341807 UHRF1BP1Q6BDS2 1440 aa17.27■□□□□ 0.35
COL22A1-202ENST00000341807 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.27■□□□□ 0.35
COL22A1-202ENST00000341807 BACH2Q9BYV9 841 aa17.27■□□□□ 0.35
COL22A1-202ENST00000341807 KDM5CP41229 1560 aa17.26■□□□□ 0.35
COL22A1-202ENST00000341807 EIF4G3O43432 1585 aaKnown RBP17.26■□□□□ 0.35
COL22A1-202ENST00000341807 ITSN2Q9NZM3 1697 aa17.25■□□□□ 0.35
COL22A1-202ENST00000341807 TESK2Q96S53 571 aa17.25■□□□□ 0.35
COL22A1-202ENST00000341807 GOLGA2Q08379 1002 aa17.24■□□□□ 0.35
COL22A1-202ENST00000341807 PPP2R1AP30153 589 aa17.23■□□□□ 0.35
COL22A1-202ENST00000341807 CEP170Q5SW79 1584 aa17.23■□□□□ 0.35
COL22A1-202ENST00000341807 PARD3Q8TEW0 1356 aa17.23■□□□□ 0.35
COL22A1-202ENST00000341807 APAF1O14727 1248 aa17.23■□□□□ 0.35
COL22A1-202ENST00000341807 EFCAB2Q5VUJ9 269 aa17.23■□□□□ 0.35
COL22A1-202ENST00000341807 ERBINQ96RT1 1412 aa17.23■□□□□ 0.35
COL22A1-202ENST00000341807 ARHGAP5Q13017 1502 aa17.22■□□□□ 0.35
COL22A1-202ENST00000341807 PRAG1Q86YV5 1406 aa17.22■□□□□ 0.35
COL22A1-202ENST00000341807 CCDC141Q6ZP82 1450 aa17.22■□□□□ 0.35
COL22A1-202ENST00000341807 AFAP1Q8N556 730 aa17.22■□□□□ 0.35
COL22A1-202ENST00000341807 CDCA8Q53HL2 280 aa17.22■□□□□ 0.35
COL22A1-202ENST00000341807 PLEKHH2Q8IVE3 1493 aa17.21■□□□□ 0.35
COL22A1-202ENST00000341807 MS4A1P11836 297 aa17.2■□□□□ 0.34
COL22A1-202ENST00000341807 DDRGK1Q96HY6 314 aa17.2■□□□□ 0.34
COL22A1-202ENST00000341807 FRAT1Q92837 279 aaPredicted RBP17.2■□□□□ 0.34
COL22A1-202ENST00000341807 PPM1GO15355 546 aaPredicted RBP17.19■□□□□ 0.34
COL22A1-202ENST00000341807 FAM135AQ9P2D6 1515 aa17.19■□□□□ 0.34
COL22A1-202ENST00000341807 SPAG9O60271 1321 aaKnown RBP17.18■□□□□ 0.34
COL22A1-202ENST00000341807 KIF3BO15066 747 aa17.18■□□□□ 0.34
COL22A1-202ENST00000341807 ADGBQ8N7X0 1667 aa17.17■□□□□ 0.34
COL22A1-202ENST00000341807 ARHGEF12Q9NZN5 1544 aa17.17■□□□□ 0.34
COL22A1-202ENST00000341807 ABCC10Q5T3U5 1492 aa17.16■□□□□ 0.34
COL22A1-202ENST00000341807 RRP7AQ9Y3A4 280 aaKnown RBP17.16■□□□□ 0.34
COL22A1-202ENST00000341807 WASHC2CQ9Y4E1 1318 aa17.15■□□□□ 0.34
COL22A1-202ENST00000341807 BCAR3O75815 825 aa17.14■□□□□ 0.33
COL22A1-202ENST00000341807 CFAP70Q5T0N1 1121 aa17.14■□□□□ 0.33
COL22A1-202ENST00000341807 A2MP01023 1474 aa17.14■□□□□ 0.33
COL22A1-202ENST00000341807 SHANK2Q9UPX8 1470 aa17.13■□□□□ 0.33
COL22A1-202ENST00000341807 CENPQQ7L2Z9 268 aaPredicted RBP17.13■□□□□ 0.33
COL22A1-202ENST00000341807 IL27Q8NEV9 243 aa17.13■□□□□ 0.33
COL22A1-202ENST00000341807 NUP160Q12769 1436 aa17.13■□□□□ 0.33
COL22A1-202ENST00000341807 SYCP2Q9BX26 1530 aa17.13■□□□□ 0.33
COL22A1-202ENST00000341807 DUSP27Q5VZP5 1158 aa17.12■□□□□ 0.33
COL22A1-202ENST00000341807 BCL2L13Q9BXK5 485 aa17.1■□□□□ 0.33
COL22A1-202ENST00000341807 PLEKHH1Q9ULM0 1364 aa17.1■□□□□ 0.33
COL22A1-202ENST00000341807 FAM161AQ3B820 660 aa17.09■□□□□ 0.33
COL22A1-202ENST00000341807 COG6Q9Y2V7 657 aa17.09■□□□□ 0.33
COL22A1-202ENST00000341807 TRAK1Q9UPV9 953 aa17.09■□□□□ 0.33
COL22A1-202ENST00000341807 NUTM2DQ5VT03 806 aaPredicted RBP17.09■□□□□ 0.33
COL22A1-202ENST00000341807 PLA2R1Q13018 1463 aa17.09■□□□□ 0.33
COL22A1-202ENST00000341807 AMER1Q5JTC6 1135 aaPredicted RBP17.08■□□□□ 0.33
COL22A1-202ENST00000341807 ARXQ96QS3 562 aa17.08■□□□□ 0.33
COL22A1-202ENST00000341807 SAFB2Q14151 953 aaKnown RBP eCLIP17.08■□□□□ 0.32
COL22A1-202ENST00000341807 MORC1Q86VD1 984 aa17.08■□□□□ 0.32
COL22A1-202ENST00000341807 CLUAP1Q96AJ1 413 aa17.08■□□□□ 0.32
COL22A1-202ENST00000341807 CDC42BPAQ5VT25 1732 aa17.08■□□□□ 0.32
COL22A1-202ENST00000341807 COL17A1Q9UMD9 1497 aaPredicted RBP17.08■□□□□ 0.32
COL22A1-202ENST00000341807 SPINK5Q9NQ38 1064 aaPredicted RBP17.07■□□□□ 0.32
COL22A1-202ENST00000341807 POLR1AO95602 1720 aaPredicted RBP17.07■□□□□ 0.32
COL22A1-202ENST00000341807 PANK1Q8TE04 598 aa17.07■□□□□ 0.32
COL22A1-202ENST00000341807 NFKBIBQ15653 356 aa17.05■□□□□ 0.32
COL22A1-202ENST00000341807 SLFN5Q08AF3 891 aa17.05■□□□□ 0.32
COL22A1-202ENST00000341807 ABCA8O94911 1581 aa17.05■□□□□ 0.32
COL22A1-202ENST00000341807 GGT6Q6P531 493 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms