RNA–Protein interactions for RNA: ENST00000340994.4

PKHD1-201, Transcript of PKHD1, fibrocystin/polyductin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PKHD1, Length 11,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1-201ENST00000340994 NGEFQ8N5V2 710 aa10.09□□□□□ -0.79
PKHD1-201ENST00000340994 CENPJQ9HC77 1338 aaPredicted RBP10.09□□□□□ -0.79
PKHD1-201ENST00000340994 INCENPQ9NQS7 918 aa10.09□□□□□ -0.79
PKHD1-201ENST00000340994 LETM1O95202 739 aaPredicted RBP10.08□□□□□ -0.8
PKHD1-201ENST00000340994 C14orf37Q86TY3 774 aa10.08□□□□□ -0.8
PKHD1-201ENST00000340994 CAGE1Q8TC20 777 aa10.08□□□□□ -0.8
PKHD1-201ENST00000340994 PDE4AP27815 886 aa10.08□□□□□ -0.8
PKHD1-201ENST00000340994 NASPP49321 788 aaPredicted RBP10.08□□□□□ -0.8
PKHD1-201ENST00000340994 U2SURPO15042 1029 aaKnown RBP10.08□□□□□ -0.8
PKHD1-201ENST00000340994 NUCB2P80303 420 aa10.08□□□□□ -0.8
PKHD1-201ENST00000340994 MORC1Q86VD1 984 aa10.07□□□□□ -0.8
PKHD1-201ENST00000340994 CFDP1Q9UEE9 299 aaPredicted RBP10.07□□□□□ -0.8
PKHD1-201ENST00000340994 NLRP13Q86W25 1043 aa10.07□□□□□ -0.8
PKHD1-201ENST00000340994 TPD52L1Q16890 204 aaPredicted RBP10.07□□□□□ -0.8
PKHD1-201ENST00000340994 SPAG9O60271 1321 aaKnown RBP10.07□□□□□ -0.8
PKHD1-201ENST00000340994 LMOD3Q0VAK6 560 aa10.07□□□□□ -0.8
PKHD1-201ENST00000340994 ROCK1Q13464 1354 aa10.07□□□□□ -0.8
PKHD1-201ENST00000340994 MNS1Q8NEH6 495 aa10.07□□□□□ -0.8
PKHD1-201ENST00000340994 GOLGA6L7A0A1B0GV03 622 aa10.07□□□□□ -0.8
PKHD1-201ENST00000340994 HOMER1Q86YM7 354 aa10.07□□□□□ -0.8
PKHD1-201ENST00000340994 RASSF8Q8NHQ8 419 aa10.07□□□□□ -0.8
PKHD1-201ENST00000340994 RTF1Q92541 710 aaKnown RBP10.06□□□□□ -0.8
PKHD1-201ENST00000340994 H3BQV1 296 aa10.06□□□□□ -0.8
PKHD1-201ENST00000340994 IFFO2Q5TF58 517 aa10.06□□□□□ -0.8
PKHD1-201ENST00000340994 KIF7Q2M1P5 1343 aa10.06□□□□□ -0.8
PKHD1-201ENST00000340994 CHMP5Q9NZZ3 219 aa10.06□□□□□ -0.8
PKHD1-201ENST00000340994 ZRSR2Q15696 482 aaKnown RBP10.06□□□□□ -0.8
PKHD1-201ENST00000340994 SF3A1Q15459 793 aaKnown RBP10.06□□□□□ -0.8
PKHD1-201ENST00000340994 PLEKHD1A6NEE1 506 aa10.06□□□□□ -0.8
PKHD1-201ENST00000340994 PABPN1Q86U42 306 aaKnown RBP eCLIP10.06□□□□□ -0.8
PKHD1-201ENST00000340994 CCDC173Q0VFZ6 552 aa10.05□□□□□ -0.8
PKHD1-201ENST00000340994 NACADO15069 1562 aa10.05□□□□□ -0.8
PKHD1-201ENST00000340994 LRRFIP1Q32MZ4 808 aaKnown RBP10.05□□□□□ -0.8
PKHD1-201ENST00000340994 POGKQ9P215 609 aa10.05□□□□□ -0.8
PKHD1-201ENST00000340994 DEF6Q9H4E7 631 aa10.04□□□□□ -0.8
PKHD1-201ENST00000340994 TRIM6-TRIM34B2RNG4 842 aa10.04□□□□□ -0.8
PKHD1-201ENST00000340994 ZNF592Q92610 1267 aa10.04□□□□□ -0.8
PKHD1-201ENST00000340994 FMN1Q68DA7 1419 aa10.04□□□□□ -0.8
PKHD1-201ENST00000340994 IFT57Q9NWB7 429 aa10.03□□□□□ -0.8
PKHD1-201ENST00000340994 STK31Q9BXU1 1019 aa10.03□□□□□ -0.8
PKHD1-201ENST00000340994 NPHP1O15259 732 aa10.03□□□□□ -0.8
PKHD1-201ENST00000340994 PRKCSHP14314 528 aaPredicted RBP10.03□□□□□ -0.8
PKHD1-201ENST00000340994 MBD3O95983 291 aa10.03□□□□□ -0.8
PKHD1-201ENST00000340994 TAOK2Q9UL54 1235 aa10.03□□□□□ -0.8
PKHD1-201ENST00000340994 STK11IPQ8N1F8 1099 aa10.03□□□□□ -0.8
PKHD1-201ENST00000340994 SMC4Q9NTJ3 1288 aa10.03□□□□□ -0.8
PKHD1-201ENST00000340994 KIAA0754O94854 1291 aa10.02□□□□□ -0.8
PKHD1-201ENST00000340994 PDCL2Q8N4E4 241 aa10.02□□□□□ -0.8
PKHD1-201ENST00000340994 NEXNQ0ZGT2 675 aa10.02□□□□□ -0.81
PKHD1-201ENST00000340994 RGL3Q3MIN7 710 aa10.02□□□□□ -0.81
PKHD1-201ENST00000340994 BAZ1BQ9UIG0 1483 aaKnown RBP10.02□□□□□ -0.81
PKHD1-201ENST00000340994 MYBBP1AQ9BQG0 1328 aaKnown RBP10.01□□□□□ -0.81
PKHD1-201ENST00000340994 A0A0G2JS52 829 aa10.01□□□□□ -0.81
PKHD1-201ENST00000340994 PATL2C9JE40 543 aaKnown RBP10.01□□□□□ -0.81
PKHD1-201ENST00000340994 PES1O00541 588 aaKnown RBP10.01□□□□□ -0.81
PKHD1-201ENST00000340994 HSPA5P11021 654 aaKnown RBP10.01□□□□□ -0.81
PKHD1-201ENST00000340994 RRP1P56182 461 aaKnown RBP10□□□□□ -0.81
PKHD1-201ENST00000340994 RUFY2Q8WXA3 655 aa10□□□□□ -0.81
PKHD1-201ENST00000340994 EIF3JO75822 258 aaKnown RBP10□□□□□ -0.81
PKHD1-201ENST00000340994 ANKRD30AQ9BXX3 1397 aa10□□□□□ -0.81
PKHD1-201ENST00000340994 CCDC47Q96A33 483 aaKnown RBP9.99□□□□□ -0.81
PKHD1-201ENST00000340994 RNF20Q5VTR2 975 aa9.99□□□□□ -0.81
PKHD1-201ENST00000340994 TXLNBQ8N3L3 684 aa9.99□□□□□ -0.81
PKHD1-201ENST00000340994 IQCEQ6IPM2 695 aa9.99□□□□□ -0.81
PKHD1-201ENST00000340994 FAM184AQ8NB25 1140 aa9.99□□□□□ -0.81
PKHD1-201ENST00000340994 FAM107BQ9H098 131 aa9.99□□□□□ -0.81
PKHD1-201ENST00000340994 SASS6Q6UVJ0 657 aa9.99□□□□□ -0.81
PKHD1-201ENST00000340994 GOLGA6L10A6NI86 522 aa9.98□□□□□ -0.81
PKHD1-201ENST00000340994 RAB3GAP2Q9H2M9 1393 aa9.98□□□□□ -0.81
PKHD1-201ENST00000340994 HDGFL2Q7Z4V5 671 aaPredicted RBP9.98□□□□□ -0.81
PKHD1-201ENST00000340994 E9PSI1 815 aa9.98□□□□□ -0.81
PKHD1-201ENST00000340994 ZKSCAN1P17029 563 aaPredicted RBP9.98□□□□□ -0.81
PKHD1-201ENST00000340994 HDGFP51858 240 aaKnown RBP9.98□□□□□ -0.81
PKHD1-201ENST00000340994 ERLIN1O75477 346 aa9.98□□□□□ -0.81
PKHD1-201ENST00000340994 CPLX2Q6PUV4 134 aaKnown RBP9.98□□□□□ -0.81
PKHD1-201ENST00000340994 DCAF11Q8TEB1 546 aa9.98□□□□□ -0.81
PKHD1-201ENST00000340994 SIN3AQ96ST3 1273 aa9.97□□□□□ -0.81
PKHD1-201ENST00000340994 DYDC1Q8WWB3 177 aa9.97□□□□□ -0.81
PKHD1-201ENST00000340994 NINLQ9Y2I6 1382 aa9.97□□□□□ -0.81
PKHD1-201ENST00000340994 NEFHP12036 1026 aa9.96□□□□□ -0.81
PKHD1-201ENST00000340994 NFKBIBQ15653 356 aa9.96□□□□□ -0.81
PKHD1-201ENST00000340994 PRM3Q9NNZ6 103 aa9.96□□□□□ -0.81
PKHD1-201ENST00000340994 CCDC73Q6ZRK6 1079 aa9.96□□□□□ -0.81
PKHD1-201ENST00000340994 UACAQ9BZF9 1416 aa9.96□□□□□ -0.82
PKHD1-201ENST00000340994 GORABQ5T7V8 394 aa9.96□□□□□ -0.82
PKHD1-201ENST00000340994 DDX19BQ9UMR2 479 aa9.96□□□□□ -0.82
PKHD1-201ENST00000340994 KIF2AO00139 706 aaPredicted RBP9.95□□□□□ -0.82
PKHD1-201ENST00000340994 CREBRFQ8IUR6 639 aa9.95□□□□□ -0.82
PKHD1-201ENST00000340994 CHMP7Q8WUX9 453 aaPredicted RBP9.95□□□□□ -0.82
PKHD1-201ENST00000340994 DDX11Q96FC9 970 aa9.95□□□□□ -0.82
PKHD1-201ENST00000340994 U2AF1L5P0DN76 240 aaPredicted RBP9.95□□□□□ -0.82
PKHD1-201ENST00000340994 U2AF1Q01081 240 aaKnown RBP eCLIP9.95□□□□□ -0.82
PKHD1-201ENST00000340994 AKAP17AQ02040 695 aaKnown RBP9.95□□□□□ -0.82
PKHD1-201ENST00000340994 RABEP1Q15276 862 aa9.95□□□□□ -0.82
PKHD1-201ENST00000340994 R3HCC1Q9Y3T6 440 aaKnown RBP9.95□□□□□ -0.82
PKHD1-201ENST00000340994 MCM2P49736 904 aa9.94□□□□□ -0.82
PKHD1-201ENST00000340994 APBB1O00213 710 aa9.94□□□□□ -0.82
PKHD1-201ENST00000340994 ERLIN2O94905 339 aa9.94□□□□□ -0.82
PKHD1-201ENST00000340994 PDCP20941 246 aa9.94□□□□□ -0.82
PKHD1-201ENST00000340994 TRIM29Q14134 588 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms