RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 CTTNBP2Q8WZ74 1663 aa20.07■□□□□ 0.8
ATXN3-201ENST00000340660 REREQ9P2R6 1566 aa20.06■□□□□ 0.8
ATXN3-201ENST00000340660 CEP170BQ9Y4F5 1589 aaPredicted RBP20.06■□□□□ 0.8
ATXN3-201ENST00000340660 MYO3AQ8NEV4 1616 aa20.05■□□□□ 0.8
ATXN3-201ENST00000340660 DIP2CQ9Y2E4 1556 aa20.05■□□□□ 0.8
ATXN3-201ENST00000340660 CNTLNQ9NXG0 1405 aa20.05■□□□□ 0.8
ATXN3-201ENST00000340660 FARP1Q9Y4F1 1045 aaPredicted RBP20.05■□□□□ 0.8
ATXN3-201ENST00000340660 CREBZFQ9NS37 354 aa20.04■□□□□ 0.8
ATXN3-201ENST00000340660 SUPT6HQ7KZ85 1726 aaKnown RBP20.04■□□□□ 0.8
ATXN3-201ENST00000340660 VWDEQ8N2E2 1590 aa20.03■□□□□ 0.8
ATXN3-201ENST00000340660 RAPGEF6Q8TEU7 1601 aa20.02■□□□□ 0.79
ATXN3-201ENST00000340660 NEURL4Q96JN8 1562 aa20■□□□□ 0.79
ATXN3-201ENST00000340660 NUP153P49790 1475 aaKnown RBP20■□□□□ 0.79
ATXN3-201ENST00000340660 P3H3Q8IVL6 736 aa20■□□□□ 0.79
ATXN3-201ENST00000340660 ZMYM3Q14202 1370 aa19.97■□□□□ 0.79
ATXN3-201ENST00000340660 KDM5CP41229 1560 aa19.97■□□□□ 0.79
ATXN3-201ENST00000340660 RNF17Q9BXT8 1623 aaKnown RBP19.97■□□□□ 0.79
ATXN3-201ENST00000340660 ABCA6Q8N139 1617 aa19.96■□□□□ 0.79
ATXN3-201ENST00000340660 MROH2AA6NES4 1674 aa19.96■□□□□ 0.79
ATXN3-201ENST00000340660 PLCH2O75038 1416 aa19.95■□□□□ 0.78
ATXN3-201ENST00000340660 ZNF518AQ6AHZ1 1483 aa19.95■□□□□ 0.78
ATXN3-201ENST00000340660 PLEKHD1A6NEE1 506 aa19.95■□□□□ 0.78
ATXN3-201ENST00000340660 FAM9AQ8IZU1 332 aaPredicted RBP19.95■□□□□ 0.78
ATXN3-201ENST00000340660 AFAP1Q8N556 730 aa19.94■□□□□ 0.78
ATXN3-201ENST00000340660 TRIM52Q96A61 297 aa19.93■□□□□ 0.78
ATXN3-201ENST00000340660 LRRC7Q96NW7 1537 aa19.92■□□□□ 0.78
ATXN3-201ENST00000340660 POLR1AO95602 1720 aaPredicted RBP19.9■□□□□ 0.78
ATXN3-201ENST00000340660 DNMT1P26358 1616 aaKnown RBP19.88■□□□□ 0.77
ATXN3-201ENST00000340660 MYT1LQ9UL68 1186 aa19.88■□□□□ 0.77
ATXN3-201ENST00000340660 STRCP1A6NGW2 1772 aa19.86■□□□□ 0.77
ATXN3-201ENST00000340660 A2ML1A8K2U0 1454 aa19.86■□□□□ 0.77
ATXN3-201ENST00000340660 SETBP1Q9Y6X0 1596 aa19.83■□□□□ 0.77
ATXN3-201ENST00000340660 CD44P16070 742 aaKnown RBP19.83■□□□□ 0.77
ATXN3-201ENST00000340660 MLH3Q9UHC1 1453 aa19.83■□□□□ 0.76
ATXN3-201ENST00000340660 FKBP8Q14318 412 aa19.82■□□□□ 0.76
ATXN3-201ENST00000340660 IFFO2Q5TF58 517 aa19.82■□□□□ 0.76
ATXN3-201ENST00000340660 EFCAB2Q5VUJ9 269 aa19.82■□□□□ 0.76
ATXN3-201ENST00000340660 SYNMO15061 1565 aa19.81■□□□□ 0.76
ATXN3-201ENST00000340660 FAM135BQ49AJ0 1406 aa19.8■□□□□ 0.76
ATXN3-201ENST00000340660 CLTCQ00610 1675 aaKnown RBP19.78■□□□□ 0.76
ATXN3-201ENST00000340660 SAMD9Q5K651 1589 aa19.77■□□□□ 0.76
ATXN3-201ENST00000340660 MNX1P50219 401 aaPredicted RBP19.76■□□□□ 0.75
ATXN3-201ENST00000340660 NPHP4O75161 1426 aaPredicted RBP19.76■□□□□ 0.75
ATXN3-201ENST00000340660 SUPT5HO00267 1087 aaKnown RBP19.75■□□□□ 0.75
ATXN3-201ENST00000340660 MED14O60244 1454 aa19.74■□□□□ 0.75
ATXN3-201ENST00000340660 GABBR2O75899 941 aa19.72■□□□□ 0.75
ATXN3-201ENST00000340660 ANKLE2Q86XL3 938 aa19.72■□□□□ 0.75
ATXN3-201ENST00000340660 MYO5CQ9NQX4 1742 aa19.72■□□□□ 0.75
ATXN3-201ENST00000340660 ZRANB1Q9UGI0 708 aa19.72■□□□□ 0.75
ATXN3-201ENST00000340660 ZNF772Q68DY9 489 aaPredicted RBP19.71■□□□□ 0.75
ATXN3-201ENST00000340660 RBM33Q96EV2 1170 aaKnown RBP19.71■□□□□ 0.75
ATXN3-201ENST00000340660 CDK12Q9NYV4 1490 aaPredicted RBP19.71■□□□□ 0.75
ATXN3-201ENST00000340660 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.7■□□□□ 0.74
ATXN3-201ENST00000340660 RXRBP28702 533 aa19.69■□□□□ 0.74
ATXN3-201ENST00000340660 LRP6O75581 1613 aa19.69■□□□□ 0.74
ATXN3-201ENST00000340660 KIDINS220Q9ULH0 1771 aa19.68■□□□□ 0.74
ATXN3-201ENST00000340660 CDK13Q14004 1512 aaKnown RBP19.67■□□□□ 0.74
ATXN3-201ENST00000340660 DEPDC5O75140 1603 aa19.67■□□□□ 0.74
ATXN3-201ENST00000340660 ABCC1P33527 1531 aa19.66■□□□□ 0.74
ATXN3-201ENST00000340660 IQGAP1P46940 1657 aa19.66■□□□□ 0.74
ATXN3-201ENST00000340660 ROBO1Q9Y6N7 1651 aa19.66■□□□□ 0.74
ATXN3-201ENST00000340660 XIRP1Q702N8 1843 aaKnown RBP19.65■□□□□ 0.74
ATXN3-201ENST00000340660 ARHGAP5Q13017 1502 aa19.65■□□□□ 0.74
ATXN3-201ENST00000340660 JCADQ9P266 1359 aa19.64■□□□□ 0.73
ATXN3-201ENST00000340660 ITSN2Q9NZM3 1697 aa19.61■□□□□ 0.73
ATXN3-201ENST00000340660 PRXQ9BXM0 1461 aa19.6■□□□□ 0.73
ATXN3-201ENST00000340660 RGS12O14924 1447 aa19.59■□□□□ 0.73
ATXN3-201ENST00000340660 ZNF579Q8NAF0 562 aaKnown RBP19.57■□□□□ 0.72
ATXN3-201ENST00000340660 KIF14Q15058 1648 aa19.57■□□□□ 0.72
ATXN3-201ENST00000340660 TNRQ92752 1358 aa19.57■□□□□ 0.72
ATXN3-201ENST00000340660 MEX3CQ5U5Q3 659 aaKnown RBP19.56■□□□□ 0.72
ATXN3-201ENST00000340660 FBXO31Q5XUX0 539 aaPredicted RBP19.54■□□□□ 0.72
ATXN3-201ENST00000340660 THEMISQ8N1K5 641 aaPredicted RBP19.54■□□□□ 0.72
ATXN3-201ENST00000340660 PHLPP1O60346 1717 aa19.53■□□□□ 0.72
ATXN3-201ENST00000340660 GGT6Q6P531 493 aa19.52■□□□□ 0.72
ATXN3-201ENST00000340660 PLXNC1O60486 1568 aa19.52■□□□□ 0.71
ATXN3-201ENST00000340660 ZC3H13Q5T200 1668 aaKnown RBP19.52■□□□□ 0.71
ATXN3-201ENST00000340660 SPATA31A6Q5VVP1 1343 aa19.51■□□□□ 0.71
ATXN3-201ENST00000340660 UGGT1Q9NYU2 1555 aa19.5■□□□□ 0.71
ATXN3-201ENST00000340660 NUTM2BA6NNL0 878 aaPredicted RBP19.5■□□□□ 0.71
ATXN3-201ENST00000340660 NUTM2EB1AL46 878 aaPredicted RBP19.5■□□□□ 0.71
ATXN3-201ENST00000340660 NUTM2DQ5VT03 806 aaPredicted RBP19.5■□□□□ 0.71
ATXN3-201ENST00000340660 NUTM2AQ8IVF1 878 aaPredicted RBP19.5■□□□□ 0.71
ATXN3-201ENST00000340660 MIER1Q8N108 512 aa19.5■□□□□ 0.71
ATXN3-201ENST00000340660 LRP5O75197 1615 aa19.5■□□□□ 0.71
ATXN3-201ENST00000340660 KDM5DQ9BY66 1539 aa19.49■□□□□ 0.71
ATXN3-201ENST00000340660 FAM135AQ9P2D6 1515 aa19.49■□□□□ 0.71
ATXN3-201ENST00000340660 COL16A1Q07092 1604 aaPredicted RBP19.48■□□□□ 0.71
ATXN3-201ENST00000340660 CDC42BPBQ9Y5S2 1711 aa19.48■□□□□ 0.71
ATXN3-201ENST00000340660 CLCN6P51797 869 aa19.47■□□□□ 0.71
ATXN3-201ENST00000340660 SAMD9LQ8IVG5 1584 aa19.46■□□□□ 0.71
ATXN3-201ENST00000340660 PAK3O75914 559 aaPredicted RBP19.45■□□□□ 0.7
ATXN3-201ENST00000340660 LRRC9Q6ZRR7 1453 aa19.45■□□□□ 0.7
ATXN3-201ENST00000340660 ATAD2Q6PL18 1390 aa19.44■□□□□ 0.7
ATXN3-201ENST00000340660 EP400Q96L91 3159 aa19.44■□□□□ 0.7
ATXN3-201ENST00000340660 TMEM94Q12767 1356 aa19.44■□□□□ 0.7
ATXN3-201ENST00000340660 ATP7AQ04656 1500 aa19.43■□□□□ 0.7
ATXN3-201ENST00000340660 MAP3K1Q13233 1512 aa19.43■□□□□ 0.7
ATXN3-201ENST00000340660 A2MP01023 1474 aa19.42■□□□□ 0.7
ATXN3-201ENST00000340660 NLRP1Q9C000 1473 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms