RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 DDRGK1Q96HY6 314 aa18.88■□□□□ 0.61
RET-201ENST00000340058 ITPRIPQ8IWB1 547 aa18.87■□□□□ 0.61
RET-201ENST00000340058 DNMBPQ6XZF7 1577 aa18.87■□□□□ 0.61
RET-201ENST00000340058 TERF2IPQ9NYB0 399 aa18.87■□□□□ 0.61
RET-201ENST00000340058 NAIPQ13075 1403 aa18.86■□□□□ 0.61
RET-201ENST00000340058 TCERG1O14776 1098 aaKnown RBP18.86■□□□□ 0.61
RET-201ENST00000340058 ABCA10Q8WWZ4 1543 aa18.86■□□□□ 0.61
RET-201ENST00000340058 EIF3AQ14152 1382 aaKnown RBP18.86■□□□□ 0.61
RET-201ENST00000340058 HFM1A2PYH4 1435 aa18.85■□□□□ 0.61
RET-201ENST00000340058 CDCA7LQ96GN5 454 aa18.85■□□□□ 0.61
RET-201ENST00000340058 SMC4Q9NTJ3 1288 aa18.85■□□□□ 0.61
RET-201ENST00000340058 ZBED9Q6R2W3 1325 aa18.85■□□□□ 0.61
RET-201ENST00000340058 WDR97A6NE52 1622 aa18.85■□□□□ 0.61
RET-201ENST00000340058 ZNF608Q9ULD9 1512 aaPredicted RBP18.85■□□□□ 0.61
RET-201ENST00000340058 RAPGEF3O95398 923 aa18.85■□□□□ 0.61
RET-201ENST00000340058 PLB1Q6P1J6 1458 aa18.84■□□□□ 0.61
RET-201ENST00000340058 VGFO15240 615 aaPredicted RBP18.84■□□□□ 0.61
RET-201ENST00000340058 UNC13AQ9UPW8 1703 aa18.84■□□□□ 0.61
RET-201ENST00000340058 NGDNQ8NEJ9 315 aaKnown RBP18.83■□□□□ 0.61
RET-201ENST00000340058 TROQ12816 1431 aaPredicted RBP18.83■□□□□ 0.6
RET-201ENST00000340058 URB2Q14146 1524 aaKnown RBP18.83■□□□□ 0.6
RET-201ENST00000340058 IFT140Q96RY7 1462 aa18.83■□□□□ 0.6
RET-201ENST00000340058 TAOK2Q9UL54 1235 aa18.82■□□□□ 0.6
RET-201ENST00000340058 CRBNQ96SW2 442 aa18.81■□□□□ 0.6
RET-201ENST00000340058 RTN4Q9NQC3 1192 aaKnown RBP18.81■□□□□ 0.6
RET-201ENST00000340058 CABP2Q9NPB3 220 aa18.81■□□□□ 0.6
RET-201ENST00000340058 NCLP19338 710 aaKnown RBP18.81■□□□□ 0.6
RET-201ENST00000340058 RTF1Q92541 710 aaKnown RBP18.81■□□□□ 0.6
RET-201ENST00000340058 EPRSP07814 1512 aaKnown RBP18.8■□□□□ 0.6
RET-201ENST00000340058 GGNBP2Q9H3C7 697 aa18.8■□□□□ 0.6
RET-201ENST00000340058 PCF11O94913 1555 aaKnown RBP18.8■□□□□ 0.6
RET-201ENST00000340058 ARHGAP5Q13017 1502 aa18.79■□□□□ 0.6
RET-201ENST00000340058 C9orf84Q5VXU9 1444 aa18.79■□□□□ 0.6
RET-201ENST00000340058 PNNQ9H307 717 aaKnown RBP18.79■□□□□ 0.6
RET-201ENST00000340058 CENPJQ9HC77 1338 aaPredicted RBP18.79■□□□□ 0.6
RET-201ENST00000340058 ADAMTS8Q9UP79 889 aa18.79■□□□□ 0.6
RET-201ENST00000340058 COG6Q9Y2V7 657 aa18.79■□□□□ 0.6
RET-201ENST00000340058 SCAPERQ9BY12 1400 aa18.79■□□□□ 0.6
RET-201ENST00000340058 ANP32BQ92688 251 aaKnown RBP18.78■□□□□ 0.6
RET-201ENST00000340058 SYNJ2O15056 1496 aa18.78■□□□□ 0.6
RET-201ENST00000340058 EFCAB5A4FU69 1503 aa18.78■□□□□ 0.6
RET-201ENST00000340058 CNTLNQ9NXG0 1405 aa18.78■□□□□ 0.6
RET-201ENST00000340058 RRP1P56182 461 aaKnown RBP18.77■□□□□ 0.6
RET-201ENST00000340058 SLKQ9H2G2 1235 aaPredicted RBP18.77■□□□□ 0.6
RET-201ENST00000340058 OS9Q13438 667 aaPredicted RBP18.77■□□□□ 0.6
RET-201ENST00000340058 SLC4A3P48751 1232 aa18.76■□□□□ 0.59
RET-201ENST00000340058 PDE3BQ13370 1112 aa18.76■□□□□ 0.59
RET-201ENST00000340058 PEG3Q9GZU2 1588 aa18.76■□□□□ 0.59
RET-201ENST00000340058 DAPK1P53355 1430 aa18.76■□□□□ 0.59
RET-201ENST00000340058 ERICH6BQ5W0A0 696 aa18.75■□□□□ 0.59
RET-201ENST00000340058 SLC12A5Q9H2X9 1139 aa18.75■□□□□ 0.59
RET-201ENST00000340058 EVC2Q86UK5 1308 aa18.74■□□□□ 0.59
RET-201ENST00000340058 SLC4A10Q6U841 1118 aa18.74■□□□□ 0.59
RET-201ENST00000340058 MS4A1P11836 297 aa18.74■□□□□ 0.59
RET-201ENST00000340058 EID1Q9Y6B2 187 aa18.74■□□□□ 0.59
RET-201ENST00000340058 ARHGEF11O15085 1522 aa18.73■□□□□ 0.59
RET-201ENST00000340058 KIAA0586Q9BVV6 1533 aa18.73■□□□□ 0.59
RET-201ENST00000340058 CGNL1Q0VF96 1302 aa18.73■□□□□ 0.59
RET-201ENST00000340058 MIA2Q96PC5 1412 aa18.73■□□□□ 0.59
RET-201ENST00000340058 AMPHP49418 695 aa18.72■□□□□ 0.59
RET-201ENST00000340058 KIAA1107Q9UPP5 1409 aa18.72■□□□□ 0.59
RET-201ENST00000340058 ZNF330Q9Y3S2 320 aaPredicted RBP18.71■□□□□ 0.59
RET-201ENST00000340058 EHBP1L1Q8N3D4 1523 aa18.71■□□□□ 0.59
RET-201ENST00000340058 IPO8O15397 1037 aaKnown RBP18.7■□□□□ 0.58
RET-201ENST00000340058 HMOX1P09601 288 aa18.7■□□□□ 0.58
RET-201ENST00000340058 CSB-PGBD3P0DP91 1061 aa18.69■□□□□ 0.58
RET-201ENST00000340058 MTHFSP49914 203 aa18.69■□□□□ 0.58
RET-201ENST00000340058 HSP90AB1P08238 724 aaKnown RBP18.68■□□□□ 0.58
RET-201ENST00000340058 PTPRKQ15262 1439 aa18.68■□□□□ 0.58
RET-201ENST00000340058 NUTM2GQ5VZR2 741 aa18.68■□□□□ 0.58
RET-201ENST00000340058 MFAP1P55081 439 aaKnown RBP18.68■□□□□ 0.58
RET-201ENST00000340058 RWDD1Q9H446 243 aaPredicted RBP18.68■□□□□ 0.58
RET-201ENST00000340058 ABCC5O15440 1437 aa18.67■□□□□ 0.58
RET-201ENST00000340058 NECTIN2Q92692 538 aa18.65■□□□□ 0.58
RET-201ENST00000340058 PNISRQ8TF01 805 aaKnown RBP18.64■□□□□ 0.58
RET-201ENST00000340058 CASC1Q6TDU7 716 aa18.64■□□□□ 0.57
RET-201ENST00000340058 IQGAP2Q13576 1575 aa18.64■□□□□ 0.57
RET-201ENST00000340058 PDE4AP27815 886 aa18.64■□□□□ 0.57
RET-201ENST00000340058 COG3Q96JB2 828 aa18.64■□□□□ 0.57
RET-201ENST00000340058 PPP2R1AP30153 589 aa18.64■□□□□ 0.57
RET-201ENST00000340058 PANK1Q8TE04 598 aa18.63■□□□□ 0.57
RET-201ENST00000340058 ANKRD30BQ9BXX2 1392 aa18.63■□□□□ 0.57
RET-201ENST00000340058 DEKP35659 375 aaKnown RBP18.63■□□□□ 0.57
RET-201ENST00000340058 RIPK4P57078 832 aa18.63■□□□□ 0.57
RET-201ENST00000340058 E9PSI1 815 aa18.62■□□□□ 0.57
RET-201ENST00000340058 KCNJ4P48050 445 aa18.61■□□□□ 0.57
RET-201ENST00000340058 FOXD4L1Q9NU39 408 aa18.61■□□□□ 0.57
RET-201ENST00000340058 AKNAQ7Z591 1439 aa18.61■□□□□ 0.57
RET-201ENST00000340058 LAMC3Q9Y6N6 1575 aa18.61■□□□□ 0.57
RET-201ENST00000340058 PRAM1Q96QH2 718 aa18.61■□□□□ 0.57
RET-201ENST00000340058 DIAPH1O60610 1272 aaKnown RBP18.6■□□□□ 0.57
RET-201ENST00000340058 GZF1Q9H116 711 aaPredicted RBP18.6■□□□□ 0.57
RET-201ENST00000340058 GRIN2AQ12879 1464 aa18.6■□□□□ 0.57
RET-201ENST00000340058 CHMP4BQ9H444 224 aaKnown RBP18.6■□□□□ 0.57
RET-201ENST00000340058 IPO9Q96P70 1041 aaKnown RBP18.59■□□□□ 0.57
RET-201ENST00000340058 TXNDC2Q86VQ3 553 aa18.59■□□□□ 0.57
RET-201ENST00000340058 TCP11L2Q8N4U5 519 aa18.59■□□□□ 0.57
RET-201ENST00000340058 HECW1Q76N89 1606 aa18.59■□□□□ 0.57
RET-201ENST00000340058 GOLGA6L22H0YM25 854 aa18.58■□□□□ 0.56
RET-201ENST00000340058 STK31Q9BXU1 1019 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms