RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 AFAP1Q8N556 730 aa20.41■□□□□ 0.86
CCNY-202ENST00000339497 RWDD1Q9H446 243 aaPredicted RBP20.41■□□□□ 0.86
CCNY-202ENST00000339497 BICRAQ9NZM4 1560 aa20.4■□□□□ 0.86
CCNY-202ENST00000339497 EXOC6Q8TAG9 804 aa20.4■□□□□ 0.86
CCNY-202ENST00000339497 DNAJC5BQ9UF47 199 aa20.39■□□□□ 0.86
CCNY-202ENST00000339497 BCL2L13Q9BXK5 485 aa20.39■□□□□ 0.85
CCNY-202ENST00000339497 APAF1O14727 1248 aa20.39■□□□□ 0.85
CCNY-202ENST00000339497 VGFO15240 615 aaPredicted RBP20.39■□□□□ 0.85
CCNY-202ENST00000339497 RTN4Q9NQC3 1192 aaKnown RBP20.38■□□□□ 0.85
CCNY-202ENST00000339497 OSCARQ8IYS5 282 aa20.38■□□□□ 0.85
CCNY-202ENST00000339497 HSCBQ8IWL3 235 aa20.37■□□□□ 0.85
CCNY-202ENST00000339497 CALD1Q05682 793 aaKnown RBP20.36■□□□□ 0.85
CCNY-202ENST00000339497 NBPF8Q3BBV2 869 aa20.36■□□□□ 0.85
CCNY-202ENST00000339497 MINK1Q8N4C8 1332 aaPredicted RBP20.35■□□□□ 0.85
CCNY-202ENST00000339497 RRP1P56182 461 aaKnown RBP20.35■□□□□ 0.85
CCNY-202ENST00000339497 TIAM1Q13009 1591 aa20.34■□□□□ 0.85
CCNY-202ENST00000339497 PRG4Q92954 1404 aaPredicted RBP20.34■□□□□ 0.85
CCNY-202ENST00000339497 SLKQ9H2G2 1235 aaPredicted RBP20.34■□□□□ 0.85
CCNY-202ENST00000339497 CNTLNQ9NXG0 1405 aa20.34■□□□□ 0.85
CCNY-202ENST00000339497 DEKP35659 375 aaKnown RBP20.34■□□□□ 0.85
CCNY-202ENST00000339497 EFCAB5A4FU69 1503 aa20.33■□□□□ 0.85
CCNY-202ENST00000339497 KCNJ4P48050 445 aa20.32■□□□□ 0.84
CCNY-202ENST00000339497 NGDNQ8NEJ9 315 aaKnown RBP20.32■□□□□ 0.84
CCNY-202ENST00000339497 CGNL1Q0VF96 1302 aa20.31■□□□□ 0.84
CCNY-202ENST00000339497 EVC2Q86UK5 1308 aa20.31■□□□□ 0.84
CCNY-202ENST00000339497 ELL2O00472 640 aaPredicted RBP20.31■□□□□ 0.84
CCNY-202ENST00000339497 PMFBP1Q8TBY8 1022 aa20.31■□□□□ 0.84
CCNY-202ENST00000339497 HFM1A2PYH4 1435 aa20.31■□□□□ 0.84
CCNY-202ENST00000339497 IPO9Q96P70 1041 aaKnown RBP20.31■□□□□ 0.84
CCNY-202ENST00000339497 CRBNQ96SW2 442 aa20.31■□□□□ 0.84
CCNY-202ENST00000339497 NBPF1Q3BBV0 1214 aa20.3■□□□□ 0.84
CCNY-202ENST00000339497 EID1Q9Y6B2 187 aa20.3■□□□□ 0.84
CCNY-202ENST00000339497 MRC2Q9UBG0 1479 aa20.28■□□□□ 0.84
CCNY-202ENST00000339497 TAOK2Q9UL54 1235 aa20.28■□□□□ 0.84
CCNY-202ENST00000339497 LTV1Q96GA3 475 aaPredicted RBP20.27■□□□□ 0.84
CCNY-202ENST00000339497 E9PSI1 815 aa20.26■□□□□ 0.83
CCNY-202ENST00000339497 MFAP1P55081 439 aaKnown RBP20.26■□□□□ 0.83
CCNY-202ENST00000339497 TMEM132EQ6IEE7 984 aa20.26■□□□□ 0.83
CCNY-202ENST00000339497 COG6Q9Y2V7 657 aa20.26■□□□□ 0.83
CCNY-202ENST00000339497 FGD1P98174 961 aa20.25■□□□□ 0.83
CCNY-202ENST00000339497 PTMAP06454 111 aaKnown RBP20.25■□□□□ 0.83
CCNY-202ENST00000339497 MIA2Q96PC5 1412 aa20.25■□□□□ 0.83
CCNY-202ENST00000339497 AMPHP49418 695 aa20.25■□□□□ 0.83
CCNY-202ENST00000339497 CFAP70Q5T0N1 1121 aa20.25■□□□□ 0.83
CCNY-202ENST00000339497 DNMBPQ6XZF7 1577 aa20.24■□□□□ 0.83
CCNY-202ENST00000339497 SLC4A10Q6U841 1118 aa20.24■□□□□ 0.83
CCNY-202ENST00000339497 SYNJ2O15056 1496 aa20.24■□□□□ 0.83
CCNY-202ENST00000339497 STK31Q9BXU1 1019 aa20.24■□□□□ 0.83
CCNY-202ENST00000339497 TROQ12816 1431 aaPredicted RBP20.24■□□□□ 0.83
CCNY-202ENST00000339497 PDE4AP27815 886 aa20.23■□□□□ 0.83
CCNY-202ENST00000339497 EHBP1L1Q8N3D4 1523 aa20.23■□□□□ 0.83
CCNY-202ENST00000339497 IFT140Q96RY7 1462 aa20.23■□□□□ 0.83
CCNY-202ENST00000339497 ARHGAP5Q13017 1502 aa20.22■□□□□ 0.83
CCNY-202ENST00000339497 SNAPC4Q5SXM2 1469 aa20.22■□□□□ 0.83
CCNY-202ENST00000339497 PLCB2Q00722 1185 aa20.21■□□□□ 0.83
CCNY-202ENST00000339497 NAIPQ13075 1403 aa20.21■□□□□ 0.83
CCNY-202ENST00000339497 CSB-PGBD3P0DP91 1061 aa20.21■□□□□ 0.83
CCNY-202ENST00000339497 CENPQQ7L2Z9 268 aaPredicted RBP20.2■□□□□ 0.82
CCNY-202ENST00000339497 ABCA10Q8WWZ4 1543 aa20.2■□□□□ 0.82
CCNY-202ENST00000339497 C9orf84Q5VXU9 1444 aa20.2■□□□□ 0.82
CCNY-202ENST00000339497 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
CCNY-202ENST00000339497 CCDC184Q52MB2 194 aa20.2■□□□□ 0.82
CCNY-202ENST00000339497 NAP1L2Q9ULW6 460 aaPredicted RBP20.2■□□□□ 0.82
CCNY-202ENST00000339497 ADAMTS8Q9UP79 889 aa20.19■□□□□ 0.82
CCNY-202ENST00000339497 CDK13Q14004 1512 aaKnown RBP20.19■□□□□ 0.82
CCNY-202ENST00000339497 KIAA1107Q9UPP5 1409 aa20.19■□□□□ 0.82
CCNY-202ENST00000339497 LMOD3Q0VAK6 560 aa20.19■□□□□ 0.82
CCNY-202ENST00000339497 FAM69CQ0P6D2 419 aa20.19■□□□□ 0.82
CCNY-202ENST00000339497 COG3Q96JB2 828 aa20.18■□□□□ 0.82
CCNY-202ENST00000339497 MCCP23508 829 aa20.18■□□□□ 0.82
CCNY-202ENST00000339497 CDCA7LQ96GN5 454 aa20.18■□□□□ 0.82
CCNY-202ENST00000339497 STAC3Q96MF2 364 aa20.18■□□□□ 0.82
CCNY-202ENST00000339497 SLC4A3P48751 1232 aa20.17■□□□□ 0.82
CCNY-202ENST00000339497 GZF1Q9H116 711 aaPredicted RBP20.17■□□□□ 0.82
CCNY-202ENST00000339497 ZRSR1Q15695 479 aaKnown RBP20.16■□□□□ 0.82
CCNY-202ENST00000339497 ZKSCAN2Q63HK3 967 aa20.16■□□□□ 0.82
CCNY-202ENST00000339497 DAPK1P53355 1430 aa20.16■□□□□ 0.82
CCNY-202ENST00000339497 GGNBP2Q9H3C7 697 aa20.15■□□□□ 0.82
CCNY-202ENST00000339497 EPRSP07814 1512 aaKnown RBP20.15■□□□□ 0.82
CCNY-202ENST00000339497 ZNF330Q9Y3S2 320 aaPredicted RBP20.15■□□□□ 0.82
CCNY-202ENST00000339497 CABP2Q9NPB3 220 aa20.14■□□□□ 0.82
CCNY-202ENST00000339497 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.14■□□□□ 0.826e-6■□□□□ 9.1
CCNY-202ENST00000339497 DIAPH1O60610 1272 aaKnown RBP20.14■□□□□ 0.81
CCNY-202ENST00000339497 CFAP44Q96MT7 982 aa20.13■□□□□ 0.81
CCNY-202ENST00000339497 BRD4O60885 1362 aaPredicted RBP20.13■□□□□ 0.81
CCNY-202ENST00000339497 PCF11O94913 1555 aaKnown RBP20.13■□□□□ 0.81
CCNY-202ENST00000339497 FAM161AQ3B820 660 aa20.12■□□□□ 0.81
CCNY-202ENST00000339497 RIPK4P57078 832 aa20.12■□□□□ 0.81
CCNY-202ENST00000339497 DNTTIP2Q5QJE6 756 aaKnown RBP20.11■□□□□ 0.81
CCNY-202ENST00000339497 KIAA1211Q6ZU35 1233 aa20.11■□□□□ 0.81
CCNY-202ENST00000339497 HMMRO75330 724 aa20.11■□□□□ 0.81
CCNY-202ENST00000339497 NPHP1O15259 732 aa20.11■□□□□ 0.81
CCNY-202ENST00000339497 KIAA0586Q9BVV6 1533 aa20.11■□□□□ 0.81
CCNY-202ENST00000339497 RUNDC1Q96C34 613 aa20.1■□□□□ 0.81
CCNY-202ENST00000339497 HECW1Q76N89 1606 aa20.1■□□□□ 0.81
CCNY-202ENST00000339497 TRIM6-TRIM34B2RNG4 842 aa20.09■□□□□ 0.81
CCNY-202ENST00000339497 MTHFSP49914 203 aa20.09■□□□□ 0.81
CCNY-202ENST00000339497 FOXD4L1Q9NU39 408 aa20.08■□□□□ 0.81
CCNY-202ENST00000339497 SCAPERQ9BY12 1400 aa20.08■□□□□ 0.81
CCNY-202ENST00000339497 PPP2R1AP30153 589 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms