RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 MAST1Q9Y2H9 1570 aa32.06■■■□□ 2.72
CLPTM1-201ENST00000337392 HNRNPUQ00839 825 aaKnown RBP eCLIP32.06■■■□□ 2.72
CLPTM1-201ENST00000337392 ST20-MTHFSA0A0A6YYL1 179 aa32.05■■■□□ 2.72
CLPTM1-201ENST00000337392 WDR7Q9Y4E6 1490 aa32.04■■■□□ 2.72
CLPTM1-201ENST00000337392 NBPF1Q3BBV0 1214 aa32.04■■■□□ 2.72
CLPTM1-201ENST00000337392 OSCARQ8IYS5 282 aa32.02■■■□□ 2.72
CLPTM1-201ENST00000337392 FAM9BQ8IZU0 186 aa32.02■■■□□ 2.72
CLPTM1-201ENST00000337392 SENP3-EIF4A1A0A087X0R7 540 aa32.01■■■□□ 2.72
CLPTM1-201ENST00000337392 PLXNC1O60486 1568 aa32■■■□□ 2.71
CLPTM1-201ENST00000337392 KDM5CP41229 1560 aa31.99■■■□□ 2.71
CLPTM1-201ENST00000337392 UNC13BO14795 1591 aa31.99■■■□□ 2.71
CLPTM1-201ENST00000337392 ASXL2Q76L83 1435 aa31.99■■■□□ 2.71
CLPTM1-201ENST00000337392 DUOX2Q9NRD8 1548 aa31.98■■■□□ 2.71
CLPTM1-201ENST00000337392 UHRF1BP1Q6BDS2 1440 aa31.97■■■□□ 2.71
CLPTM1-201ENST00000337392 FANCAO15360 1455 aa31.97■■■□□ 2.71
CLPTM1-201ENST00000337392 ROCK2O75116 1388 aaKnown RBP31.96■■■□□ 2.71
CLPTM1-201ENST00000337392 RALGAPBQ86X10 1494 aa31.96■■■□□ 2.71
CLPTM1-201ENST00000337392 MRS2Q9HD23 443 aa31.95■■■□□ 2.7
CLPTM1-201ENST00000337392 FKBP8Q14318 412 aa31.94■■■□□ 2.7
CLPTM1-201ENST00000337392 SCAPERQ9BY12 1400 aa31.93■■■□□ 2.7
CLPTM1-201ENST00000337392 A2MP01023 1474 aa31.9■■■□□ 2.7
CLPTM1-201ENST00000337392 ERBINQ96RT1 1412 aa31.9■■■□□ 2.7
CLPTM1-201ENST00000337392 IQGAP3Q86VI3 1631 aa31.9■■■□□ 2.7
CLPTM1-201ENST00000337392 ZFYVE16Q7Z3T8 1539 aa31.89■■■□□ 2.69
CLPTM1-201ENST00000337392 KIF3BO15066 747 aa31.88■■■□□ 2.69
CLPTM1-201ENST00000337392 DHX29Q7Z478 1369 aaKnown RBP31.87■■■□□ 2.69
CLPTM1-201ENST00000337392 PRAG1Q86YV5 1406 aa31.86■■■□□ 2.69
CLPTM1-201ENST00000337392 ADGRL1O94910 1474 aa31.86■■■□□ 2.69
CLPTM1-201ENST00000337392 POLR1AO95602 1720 aaPredicted RBP31.85■■■□□ 2.69
CLPTM1-201ENST00000337392 NPM1P06748 294 aaKnown RBP eCLIP31.81■■■□□ 2.68
CLPTM1-201ENST00000337392 MAGI2Q86UL8 1455 aa31.81■■■□□ 2.68
CLPTM1-201ENST00000337392 ABCA9Q8IUA7 1624 aa31.79■■■□□ 2.68
CLPTM1-201ENST00000337392 IRX6P78412 446 aaPredicted RBP31.79■■■□□ 2.68
CLPTM1-201ENST00000337392 ATP7AQ04656 1500 aa31.76■■■□□ 2.68
CLPTM1-201ENST00000337392 E9PCH4 1651 aa31.75■■■□□ 2.67
CLPTM1-201ENST00000337392 TRPM1Q7Z4N2 1603 aa31.74■■■□□ 2.67
CLPTM1-201ENST00000337392 RTEL1-TNFRSF6BF6WH68 1400 aa31.72■■■□□ 2.67
CLPTM1-201ENST00000337392 ARAP3Q8WWN8 1544 aa31.71■■■□□ 2.67
CLPTM1-201ENST00000337392 ATP10AO60312 1499 aa31.7■■■□□ 2.67
CLPTM1-201ENST00000337392 INO80Q9ULG1 1556 aaPredicted RBP31.67■■■□□ 2.66
CLPTM1-201ENST00000337392 UGGT1Q9NYU2 1555 aa31.66■■■□□ 2.66
CLPTM1-201ENST00000337392 DISP3Q9P2K9 1392 aa31.65■■■□□ 2.66
CLPTM1-201ENST00000337392 RAPGEF3O95398 923 aa31.65■■■□□ 2.66
CLPTM1-201ENST00000337392 CD109Q6YHK3 1445 aa31.64■■■□□ 2.66
CLPTM1-201ENST00000337392 TESK2Q96S53 571 aa31.62■■■□□ 2.65
CLPTM1-201ENST00000337392 CYB5RLQ6IPT4 315 aa31.62■■■□□ 2.65
CLPTM1-201ENST00000337392 GGT6Q6P531 493 aa31.62■■■□□ 2.65
CLPTM1-201ENST00000337392 NEFLP07196 543 aa31.6■■■□□ 2.65
CLPTM1-201ENST00000337392 KIDINS220Q9ULH0 1771 aa31.59■■■□□ 2.65
CLPTM1-201ENST00000337392 CLTCL1P53675 1640 aa31.59■■■□□ 2.65
CLPTM1-201ENST00000337392 CFAP65Q6ZU64 1925 aaKnown RBP31.58■■■□□ 2.65
CLPTM1-201ENST00000337392 ARID4BQ4LE39 1312 aaPredicted RBP31.57■■■□□ 2.64
CLPTM1-201ENST00000337392 GPRASP1Q5JY77 1395 aa31.56■■■□□ 2.64
CLPTM1-201ENST00000337392 KANK1Q14678 1352 aa31.55■■■□□ 2.64
CLPTM1-201ENST00000337392 DEPDC5O75140 1603 aa31.55■■■□□ 2.64
CLPTM1-201ENST00000337392 MROH1Q8NDA8 1641 aa31.54■■■□□ 2.64
CLPTM1-201ENST00000337392 SPHKAPQ2M3C7 1700 aa31.54■■■□□ 2.64
CLPTM1-201ENST00000337392 CC2D1BQ5T0F9 858 aaKnown RBP31.53■■■□□ 2.64
CLPTM1-201ENST00000337392 SENP3Q9H4L4 574 aaPredicted RBP31.53■■■□□ 2.64
CLPTM1-201ENST00000337392 TRPM2O94759 1503 aa31.52■■■□□ 2.64
CLPTM1-201ENST00000337392 TMC1Q8TDI8 760 aa31.52■■■□□ 2.64
CLPTM1-201ENST00000337392 CHGAP10645 457 aaKnown RBP31.52■■■□□ 2.64
CLPTM1-201ENST00000337392 PRDM15P57071 1507 aaPredicted RBP31.51■■■□□ 2.63
CLPTM1-201ENST00000337392 PTPRTO14522 1441 aa31.5■■■□□ 2.63
CLPTM1-201ENST00000337392 ZNF518AQ6AHZ1 1483 aa31.5■■■□□ 2.63
CLPTM1-201ENST00000337392 TET3O43151 1660 aa31.48■■■□□ 2.63
CLPTM1-201ENST00000337392 PANK3Q9H999 370 aa31.47■■■□□ 2.63
CLPTM1-201ENST00000337392 CFAP70Q5T0N1 1121 aa31.46■■■□□ 2.63
CLPTM1-201ENST00000337392 ADGRF5Q8IZF2 1346 aa31.46■■■□□ 2.63
CLPTM1-201ENST00000337392 VWDEQ8N2E2 1590 aa31.45■■■□□ 2.63
CLPTM1-201ENST00000337392 PNISRQ8TF01 805 aaKnown RBP31.45■■■□□ 2.63
CLPTM1-201ENST00000337392 SALL2Q9Y467 1007 aaPredicted RBP31.45■■■□□ 2.63
CLPTM1-201ENST00000337392 ZBED9Q6R2W3 1325 aa31.45■■■□□ 2.62
CLPTM1-201ENST00000337392 MADDQ8WXG6 1647 aa31.44■■■□□ 2.62
CLPTM1-201ENST00000337392 POGZQ7Z3K3 1410 aa31.44■■■□□ 2.62
CLPTM1-201ENST00000337392 PER1O15534 1290 aaPredicted RBP31.44■■■□□ 2.62
CLPTM1-201ENST00000337392 COL17A1Q9UMD9 1497 aaPredicted RBP31.44■■■□□ 2.62
CLPTM1-201ENST00000337392 CEP152O94986 1710 aa31.42■■■□□ 2.62
CLPTM1-201ENST00000337392 NUTM2DQ5VT03 806 aaPredicted RBP31.42■■■□□ 2.62
CLPTM1-201ENST00000337392 TMF1P82094 1093 aa31.41■■■□□ 2.62
CLPTM1-201ENST00000337392 PPRC1Q5VV67 1664 aaKnown RBP31.4■■■□□ 2.62
CLPTM1-201ENST00000337392 EIF2AK4Q9P2K8 1649 aaKnown RBP31.4■■■□□ 2.62
CLPTM1-201ENST00000337392 FRMPD1Q5SYB0 1578 aa31.39■■■□□ 2.62
CLPTM1-201ENST00000337392 MYBBP1AQ9BQG0 1328 aaKnown RBP31.37■■■□□ 2.61
CLPTM1-201ENST00000337392 RNF17Q9BXT8 1623 aaKnown RBP31.35■■■□□ 2.61
CLPTM1-201ENST00000337392 TSHZ2Q9NRE2 1034 aa31.35■■■□□ 2.61
CLPTM1-201ENST00000337392 WASHC2CQ9Y4E1 1318 aa31.35■■■□□ 2.61
CLPTM1-201ENST00000337392 EFCAB6Q5THR3 1501 aa31.34■■■□□ 2.61
CLPTM1-201ENST00000337392 ABCA6Q8N139 1617 aa31.32■■■□□ 2.6
CLPTM1-201ENST00000337392 NPATQ14207 1427 aa31.32■■■□□ 2.6
CLPTM1-201ENST00000337392 KTN1Q86UP2 1357 aaKnown RBP31.32■■■□□ 2.6
CLPTM1-201ENST00000337392 LAMC1P11047 1609 aa31.31■■■□□ 2.6
CLPTM1-201ENST00000337392 RALBP1Q15311 655 aa31.3■■■□□ 2.6
CLPTM1-201ENST00000337392 MROH2AA6NES4 1674 aa31.3■■■□□ 2.6
CLPTM1-201ENST00000337392 HECW2Q9P2P5 1572 aa31.28■■■□□ 2.6
CLPTM1-201ENST00000337392 PARD3Q8TEW0 1356 aa31.27■■■□□ 2.6
CLPTM1-201ENST00000337392 YEATS2Q9ULM3 1422 aa31.27■■■□□ 2.6
CLPTM1-201ENST00000337392 MLH3Q9UHC1 1453 aa31.27■■■□□ 2.6
CLPTM1-201ENST00000337392 BCL11AQ9H165 835 aa31.25■■■□□ 2.59
CLPTM1-201ENST00000337392 NOS1P29475 1434 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 207.2 ms