RNA–Protein interactions for RNA: ENST00000335221.9

BPTF-203, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5 BASIC

Gene BPTF, Length 2,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-203ENST00000335221 LMOD3Q0VAK6 560 aa11.2□□□□□ -0.62
BPTF-203ENST00000335221 CEP120Q8N960 986 aa11.2□□□□□ -0.62
BPTF-203ENST00000335221 PRDM16Q9HAZ2 1276 aa11.2□□□□□ -0.62
BPTF-203ENST00000335221 R3HCC1Q9Y3T6 440 aaKnown RBP11.2□□□□□ -0.62
BPTF-203ENST00000335221 MS4A1P11836 297 aa11.2□□□□□ -0.62
BPTF-203ENST00000335221 MRE11P49959 708 aa11.2□□□□□ -0.62
BPTF-203ENST00000335221 CBX1P83916 185 aa11.2□□□□□ -0.62
BPTF-203ENST00000335221 EP400NLQ6ZTU2 488 aa11.19□□□□□ -0.62
BPTF-203ENST00000335221 FSD2A1L4K1 749 aa11.19□□□□□ -0.62
BPTF-203ENST00000335221 SH3BP1Q9Y3L3 701 aa11.19□□□□□ -0.62
BPTF-203ENST00000335221 LOC102724159A0A0B4J2E5 919 aa11.18□□□□□ -0.62
BPTF-203ENST00000335221 TRIM6-TRIM34B2RNG4 842 aa11.18□□□□□ -0.62
BPTF-203ENST00000335221 TRHP20396 242 aaPredicted RBP11.18□□□□□ -0.62
BPTF-203ENST00000335221 PWP2Q15269 919 aaKnown RBP11.18□□□□□ -0.62
BPTF-203ENST00000335221 NBPF20Q3BBV1 942 aa11.18□□□□□ -0.62
BPTF-203ENST00000335221 TRIM34Q9BYJ4 488 aa11.18□□□□□ -0.62
BPTF-203ENST00000335221 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.18□□□□□ -0.62
BPTF-203ENST00000335221 NCAPD3P42695 1498 aa11.17□□□□□ -0.62
BPTF-203ENST00000335221 HSP90AB3PQ58FF7 597 aa11.17□□□□□ -0.62
BPTF-203ENST00000335221 ZNF771Q7L3S4 317 aaPredicted RBP11.17□□□□□ -0.62
BPTF-203ENST00000335221 MPNDQ8N594 471 aa11.17□□□□□ -0.62
BPTF-203ENST00000335221 GPATCH11Q8N954 259 aa11.17□□□□□ -0.62
BPTF-203ENST00000335221 ABCC8Q09428 1581 aa11.17□□□□□ -0.62
BPTF-203ENST00000335221 PPP1R15AO75807 674 aaPredicted RBP11.17□□□□□ -0.62
BPTF-203ENST00000335221 ANAPC15P60006 121 aa11.16□□□□□ -0.62
BPTF-203ENST00000335221 SEMA3FQ13275 785 aa11.16□□□□□ -0.62
BPTF-203ENST00000335221 WRNQ14191 1432 aaPredicted RBP eCLIP11.16□□□□□ -0.62
BPTF-203ENST00000335221 IRF6O14896 467 aa11.15□□□□□ -0.62
BPTF-203ENST00000335221 MSNP26038 577 aaKnown RBP11.15□□□□□ -0.62
BPTF-203ENST00000335221 TSPYL1Q9H0U9 437 aa11.14□□□□□ -0.63
BPTF-203ENST00000335221 PEG3Q9GZU2 1588 aa11.13□□□□□ -0.63
BPTF-203ENST00000335221 GOLIM4O00461 696 aa11.13□□□□□ -0.63
BPTF-203ENST00000335221 CCDC66A2RUB6 948 aa11.12□□□□□ -0.63
BPTF-203ENST00000335221 NPM1P06748 294 aaKnown RBP eCLIP11.12□□□□□ -0.63
BPTF-203ENST00000335221 CDCA8Q53HL2 280 aa11.12□□□□□ -0.63
BPTF-203ENST00000335221 TIGD1Q96MW7 591 aa11.11□□□□□ -0.63
BPTF-203ENST00000335221 ATAD2BQ9ULI0 1458 aa11.11□□□□□ -0.63
BPTF-203ENST00000335221 TNNT3P45378 269 aaPredicted RBP11.11□□□□□ -0.63
BPTF-203ENST00000335221 ZSCAN30Q86W11 494 aa11.11□□□□□ -0.63
BPTF-203ENST00000335221 GRPEL1Q9HAV7 217 aa11.11□□□□□ -0.63
BPTF-203ENST00000335221 ZBED9Q6R2W3 1325 aa11.11□□□□□ -0.63
BPTF-203ENST00000335221 GZF1Q9H116 711 aaPredicted RBP11.1□□□□□ -0.63
BPTF-203ENST00000335221 EFCC1Q9HA90 598 aa11.1□□□□□ -0.63
BPTF-203ENST00000335221 ZNF500O60304 480 aaPredicted RBP11.1□□□□□ -0.63
BPTF-203ENST00000335221 ADRA2BP18089 450 aa11.1□□□□□ -0.63
BPTF-203ENST00000335221 SATB1Q01826 763 aa11.09□□□□□ -0.63
BPTF-203ENST00000335221 MLECQ14165 292 aa11.09□□□□□ -0.63
BPTF-203ENST00000335221 NBPF1Q3BBV0 1214 aa11.09□□□□□ -0.63
BPTF-203ENST00000335221 CEP83Q9Y592 693 aa11.09□□□□□ -0.63
BPTF-203ENST00000335221 KIF3AQ9Y496 699 aa11.08□□□□□ -0.64
BPTF-203ENST00000335221 DHX57Q6P158 1386 aaKnown RBP11.08□□□□□ -0.64
BPTF-203ENST00000335221 NBPF11Q86T75 865 aa11.08□□□□□ -0.64
BPTF-203ENST00000335221 MYCBPQ99417 103 aaPredicted RBP11.08□□□□□ -0.64
BPTF-203ENST00000335221 CWC22Q9HCG8 908 aaKnown RBP11.08□□□□□ -0.64
BPTF-203ENST00000335221 MAP2K1Q02750 393 aaPredicted RBP11.07□□□□□ -0.64
BPTF-203ENST00000335221 BECN1Q14457 450 aa11.06□□□□□ -0.64
BPTF-203ENST00000335221 STK26Q9P289 416 aa11.06□□□□□ -0.64
BPTF-203ENST00000335221 ISY1Q9ULR0 285 aaKnown RBP11.06□□□□□ -0.64
BPTF-203ENST00000335221 TTC36A6NLP5 189 aa11.06□□□□□ -0.64
BPTF-203ENST00000335221 CT47A1Q5JQC4 288 aaPredicted RBP11.06□□□□□ -0.64
BPTF-203ENST00000335221 RNF217Q8TC41 542 aa11.06□□□□□ -0.64
BPTF-203ENST00000335221 RGL3Q3MIN7 710 aa11.05□□□□□ -0.64
BPTF-203ENST00000335221 CAPN2P17655 700 aa11.05□□□□□ -0.64
BPTF-203ENST00000335221 GTF2A1P52655 376 aaPredicted RBP11.05□□□□□ -0.64
BPTF-203ENST00000335221 SMC4Q9NTJ3 1288 aa11.05□□□□□ -0.64
BPTF-203ENST00000335221 CCDC172P0C7W6 258 aa11.04□□□□□ -0.64
BPTF-203ENST00000335221 ATP2B3Q16720 1220 aa11.04□□□□□ -0.64
BPTF-203ENST00000335221 SASS6Q6UVJ0 657 aa11.04□□□□□ -0.64
BPTF-203ENST00000335221 SOGA1O94964 1423 aa11.04□□□□□ -0.64
BPTF-203ENST00000335221 TULP2O00295 520 aa11.04□□□□□ -0.64
BPTF-203ENST00000335221 ZBTB12Q9Y330 459 aaPredicted RBP11.04□□□□□ -0.64
BPTF-203ENST00000335221 BRPF1P55201 1214 aaPredicted RBP11.03□□□□□ -0.64
BPTF-203ENST00000335221 CSPP1Q1MSJ5 1256 aa11.03□□□□□ -0.64
BPTF-203ENST00000335221 NBPF9Q3BBW0 867 aa11.03□□□□□ -0.64
BPTF-203ENST00000335221 SIRT1Q96EB6 747 aa11.03□□□□□ -0.64
BPTF-203ENST00000335221 RAI14Q9P0K7 980 aa11.03□□□□□ -0.64
BPTF-203ENST00000335221 NCAPGQ9BPX3 1015 aa11.02□□□□□ -0.65
BPTF-203ENST00000335221 MAFGO15525 162 aa11.02□□□□□ -0.65
BPTF-203ENST00000335221 SSR1P43307 286 aaKnown RBP11.02□□□□□ -0.65
BPTF-203ENST00000335221 CC2D2BQ6DHV5 1058 aa11.02□□□□□ -0.65
BPTF-203ENST00000335221 CALCOCO1Q9P1Z2 691 aa11.02□□□□□ -0.65
BPTF-203ENST00000335221 SPDYE4A6NLX3 237 aa11.01□□□□□ -0.65
BPTF-203ENST00000335221 ARID4AP29374 1257 aaPredicted RBP11.01□□□□□ -0.65
BPTF-203ENST00000335221 CCDC173Q0VFZ6 552 aa11.01□□□□□ -0.65
BPTF-203ENST00000335221 FAM9BQ8IZU0 186 aa11.01□□□□□ -0.65
BPTF-203ENST00000335221 PHLDB1Q86UU1 1377 aa11.01□□□□□ -0.65
BPTF-203ENST00000335221 RUSC2Q8N2Y8 1516 aa11.01□□□□□ -0.65
BPTF-203ENST00000335221 PLCB2Q00722 1185 aa11□□□□□ -0.65
BPTF-203ENST00000335221 AKNAQ7Z591 1439 aa11□□□□□ -0.65
BPTF-203ENST00000335221 TERF2IPQ9NYB0 399 aa10.99□□□□□ -0.65
BPTF-203ENST00000335221 PLEKHD1A6NEE1 506 aa10.98□□□□□ -0.65
BPTF-203ENST00000335221 CEP162Q5TB80 1403 aa10.98□□□□□ -0.65
BPTF-203ENST00000335221 XPCQ01831 940 aaPredicted RBP10.98□□□□□ -0.65
BPTF-203ENST00000335221 OTUD6BQ8N6M0 293 aa10.98□□□□□ -0.65
BPTF-203ENST00000335221 SLKQ9H2G2 1235 aaPredicted RBP10.98□□□□□ -0.65
BPTF-203ENST00000335221 RNF123Q5XPI4 1314 aa10.97□□□□□ -0.65
BPTF-203ENST00000335221 UPF2Q9HAU5 1272 aaKnown RBP10.97□□□□□ -0.65
BPTF-203ENST00000335221 GABPB1Q06547 395 aaPredicted RBP10.97□□□□□ -0.65
BPTF-203ENST00000335221 FAM50AQ14320 339 aaKnown RBP10.97□□□□□ -0.65
BPTF-203ENST00000335221 TRAK2O60296 914 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms