RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 SRPK2P78362 688 aaKnown RBP12.1□□□□□ -0.47
COL4A6-201ENST00000334504 BCL11BQ9C0K0 894 aaPredicted RBP12.1□□□□□ -0.47
COL4A6-201ENST00000334504 H3BQV1 296 aa12.1□□□□□ -0.47
COL4A6-201ENST00000334504 PAK3O75914 559 aaPredicted RBP12.1□□□□□ -0.47
COL4A6-201ENST00000334504 IFFO2Q5TF58 517 aa12.1□□□□□ -0.47
COL4A6-201ENST00000334504 CENPJQ9HC77 1338 aaPredicted RBP12.1□□□□□ -0.47
COL4A6-201ENST00000334504 HOMER1Q86YM7 354 aa12.09□□□□□ -0.47
COL4A6-201ENST00000334504 CCDC146Q8IYE0 955 aa12.09□□□□□ -0.47
COL4A6-201ENST00000334504 RRP12Q5JTH9 1297 aaKnown RBP12.09□□□□□ -0.47
COL4A6-201ENST00000334504 HMMRO75330 724 aa12.08□□□□□ -0.47
COL4A6-201ENST00000334504 SAFB2Q14151 953 aaKnown RBP eCLIP12.08□□□□□ -0.47
COL4A6-201ENST00000334504 EXOC6Q8TAG9 804 aa12.08□□□□□ -0.48
COL4A6-201ENST00000334504 TPM1P09493 284 aa12.08□□□□□ -0.48
COL4A6-201ENST00000334504 MAP7D2Q96T17 732 aa12.08□□□□□ -0.48
COL4A6-201ENST00000334504 SETD5Q9C0A6 1442 aa12.07□□□□□ -0.48
COL4A6-201ENST00000334504 ATP6V1DQ9Y5K8 247 aa12.07□□□□□ -0.48
COL4A6-201ENST00000334504 G3V3G9 751 aa12.07□□□□□ -0.48
COL4A6-201ENST00000334504 TPM2P07951 284 aa12.07□□□□□ -0.48
COL4A6-201ENST00000334504 DCAF8Q5TAQ9 597 aa12.07□□□□□ -0.48
COL4A6-201ENST00000334504 MTERF4Q7Z6M4 381 aaKnown RBP12.07□□□□□ -0.48
COL4A6-201ENST00000334504 ARGLU1Q9NWB6 273 aaPredicted RBP12.07□□□□□ -0.48
COL4A6-201ENST00000334504 RB1CC1Q8TDY2 1594 aa12.06□□□□□ -0.48
COL4A6-201ENST00000334504 PDE3BQ13370 1112 aa12.06□□□□□ -0.48
COL4A6-201ENST00000334504 MSH5O43196 834 aa12.06□□□□□ -0.48
COL4A6-201ENST00000334504 PLIN1O60240 522 aa12.06□□□□□ -0.48
COL4A6-201ENST00000334504 TMX4Q9H1E5 349 aaPredicted RBP12.06□□□□□ -0.48
COL4A6-201ENST00000334504 KIF3AQ9Y496 699 aa12.06□□□□□ -0.48
COL4A6-201ENST00000334504 GORABQ5T7V8 394 aa12.06□□□□□ -0.48
COL4A6-201ENST00000334504 CCDC66A2RUB6 948 aa12.05□□□□□ -0.48
COL4A6-201ENST00000334504 CSB-PGBD3P0DP91 1061 aa12.05□□□□□ -0.48
COL4A6-201ENST00000334504 RBM10P98175 930 aaKnown RBP12.05□□□□□ -0.48
COL4A6-201ENST00000334504 CHMP5Q9NZZ3 219 aa12.05□□□□□ -0.48
COL4A6-201ENST00000334504 IL27Q8NEV9 243 aa12.05□□□□□ -0.48
COL4A6-201ENST00000334504 IFT57Q9NWB7 429 aa12.05□□□□□ -0.48
COL4A6-201ENST00000334504 BRPF3Q9ULD4 1205 aa12.05□□□□□ -0.48
COL4A6-201ENST00000334504 NFKBIBQ15653 356 aa12.05□□□□□ -0.48
COL4A6-201ENST00000334504 CRBNQ96SW2 442 aa12.05□□□□□ -0.48
COL4A6-201ENST00000334504 CWC15Q9P013 229 aaKnown RBP12.05□□□□□ -0.48
COL4A6-201ENST00000334504 SLC4A10Q6U841 1118 aa12.05□□□□□ -0.48
COL4A6-201ENST00000334504 FAM184AQ8NB25 1140 aa12.05□□□□□ -0.48
COL4A6-201ENST00000334504 AK7Q96M32 723 aa12.04□□□□□ -0.48
COL4A6-201ENST00000334504 MNS1Q8NEH6 495 aa12.04□□□□□ -0.48
COL4A6-201ENST00000334504 CHMP3Q9Y3E7 222 aa12.04□□□□□ -0.48
COL4A6-201ENST00000334504 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.04□□□□□ -0.48
COL4A6-201ENST00000334504 CEP164Q9UPV0 1460 aa12.03□□□□□ -0.48
COL4A6-201ENST00000334504 RRP1P56182 461 aaKnown RBP12.03□□□□□ -0.48
COL4A6-201ENST00000334504 RUFY1Q96T51 708 aa12.03□□□□□ -0.48
COL4A6-201ENST00000334504 RILPL2Q969X0 211 aa12.03□□□□□ -0.48
COL4A6-201ENST00000334504 STK31Q9BXU1 1019 aa12.03□□□□□ -0.48
COL4A6-201ENST00000334504 ACBD3Q9H3P7 528 aa12.03□□□□□ -0.48
COL4A6-201ENST00000334504 CCDC39Q9UFE4 941 aa12.03□□□□□ -0.48
COL4A6-201ENST00000334504 FOXD1Q16676 465 aa12.03□□□□□ -0.48
COL4A6-201ENST00000334504 ANKRD45Q5TZF3 282 aa12.03□□□□□ -0.48
COL4A6-201ENST00000334504 DIAPH3Q9NSV4 1193 aa12.03□□□□□ -0.48
COL4A6-201ENST00000334504 FBXO3Q9UK99 471 aa12.03□□□□□ -0.48
COL4A6-201ENST00000334504 RDXP35241 583 aaKnown RBP12.02□□□□□ -0.48
COL4A6-201ENST00000334504 MCTP1Q6DN14 999 aa12.02□□□□□ -0.49
COL4A6-201ENST00000334504 ROCK2O75116 1388 aaKnown RBP12.02□□□□□ -0.49
COL4A6-201ENST00000334504 BAZ1BQ9UIG0 1483 aaKnown RBP12.02□□□□□ -0.49
COL4A6-201ENST00000334504 EIF4G1Q04637 1599 aaKnown RBP12.02□□□□□ -0.49
COL4A6-201ENST00000334504 H0YHG0 523 aa12.01□□□□□ -0.49
COL4A6-201ENST00000334504 MRE11P49959 708 aa12.01□□□□□ -0.49
COL4A6-201ENST00000334504 HSP90B2PQ58FF3 399 aa12.01□□□□□ -0.49
COL4A6-201ENST00000334504 PCMTD1Q96MG8 357 aaPredicted RBP12.01□□□□□ -0.49
COL4A6-201ENST00000334504 TOMM22Q9NS69 142 aa12.01□□□□□ -0.49
COL4A6-201ENST00000334504 HDGFL2Q7Z4V5 671 aaPredicted RBP12□□□□□ -0.49
COL4A6-201ENST00000334504 NASPP49321 788 aaPredicted RBP12□□□□□ -0.49
COL4A6-201ENST00000334504 FBXW7Q969H0 707 aa12□□□□□ -0.49
COL4A6-201ENST00000334504 MARCH6O60337 910 aa11.99□□□□□ -0.49
COL4A6-201ENST00000334504 IPO7O95373 1038 aaKnown RBP11.99□□□□□ -0.49
COL4A6-201ENST00000334504 MEX3CQ5U5Q3 659 aaKnown RBP11.99□□□□□ -0.49
COL4A6-201ENST00000334504 BICD2Q8TD16 824 aa11.98□□□□□ -0.49
COL4A6-201ENST00000334504 CDR1P51861 262 aa11.98□□□□□ -0.49
COL4A6-201ENST00000334504 STK26Q9P289 416 aa11.98□□□□□ -0.49
COL4A6-201ENST00000334504 CCDC191Q8NCU4 936 aa11.98□□□□□ -0.49
COL4A6-201ENST00000334504 SASS6Q6UVJ0 657 aa11.97□□□□□ -0.49
COL4A6-201ENST00000334504 NLRP13Q86W25 1043 aa11.97□□□□□ -0.49
COL4A6-201ENST00000334504 SPAG9O60271 1321 aaKnown RBP11.97□□□□□ -0.49
COL4A6-201ENST00000334504 VPS53Q5VIR6 699 aa11.97□□□□□ -0.49
COL4A6-201ENST00000334504 PLCD4Q9BRC7 762 aa11.97□□□□□ -0.49
COL4A6-201ENST00000334504 HSP90AB3PQ58FF7 597 aa11.97□□□□□ -0.49
COL4A6-201ENST00000334504 WWC1Q8IX03 1113 aa11.97□□□□□ -0.49
COL4A6-201ENST00000334504 BCL2L13Q9BXK5 485 aa11.96□□□□□ -0.49
COL4A6-201ENST00000334504 PKD2Q13563 968 aa11.96□□□□□ -0.49
COL4A6-201ENST00000334504 RRP7AQ9Y3A4 280 aaKnown RBP11.95□□□□□ -0.5
COL4A6-201ENST00000334504 COG6Q9Y2V7 657 aa11.95□□□□□ -0.5
COL4A6-201ENST00000334504 RAB3GAP2Q9H2M9 1393 aa11.95□□□□□ -0.5
COL4A6-201ENST00000334504 ANKRD20A12PQ8NF67 263 aa11.95□□□□□ -0.5
COL4A6-201ENST00000334504 LEKR1Q6ZMV7 388 aa11.95□□□□□ -0.5
COL4A6-201ENST00000334504 HDAC5Q9UQL6 1122 aa11.94□□□□□ -0.5
COL4A6-201ENST00000334504 NUCB2P80303 420 aa11.94□□□□□ -0.5
COL4A6-201ENST00000334504 RNF214Q8ND24 703 aa11.94□□□□□ -0.5
COL4A6-201ENST00000334504 PHLDB1Q86UU1 1377 aa11.94□□□□□ -0.5
COL4A6-201ENST00000334504 KANK1Q14678 1352 aa11.94□□□□□ -0.5
COL4A6-201ENST00000334504 ANO2Q9NQ90 1003 aa11.94□□□□□ -0.5
COL4A6-201ENST00000334504 ZBED9Q6R2W3 1325 aa11.94□□□□□ -0.5
COL4A6-201ENST00000334504 MAPK8IP2Q13387 824 aaPredicted RBP11.93□□□□□ -0.5
COL4A6-201ENST00000334504 DCTN1Q14203 1278 aa11.93□□□□□ -0.5
COL4A6-201ENST00000334504 MYBBP1AQ9BQG0 1328 aaKnown RBP11.93□□□□□ -0.5
COL4A6-201ENST00000334504 TRAK2O60296 914 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms