RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 CHMP4AQ9BY43 222 aa19.17■□□□□ 0.66
C9orf47-201ENST00000334490 RCAN3Q9UKA8 241 aa19.16■□□□□ 0.66
C9orf47-201ENST00000334490 NCLP19338 710 aaKnown RBP19.16■□□□□ 0.66
C9orf47-201ENST00000334490 CGNL1Q0VF96 1302 aa19.15■□□□□ 0.66
C9orf47-201ENST00000334490 APBB1O00213 710 aa19.15■□□□□ 0.66
C9orf47-201ENST00000334490 FGD1P98174 961 aa19.14■□□□□ 0.66
C9orf47-201ENST00000334490 AEBP2Q6ZN18 517 aaPredicted RBP19.14■□□□□ 0.65
C9orf47-201ENST00000334490 LMOD3Q0VAK6 560 aa19.12■□□□□ 0.65
C9orf47-201ENST00000334490 GOLGA6L22H0YM25 854 aa19.12■□□□□ 0.65
C9orf47-201ENST00000334490 ITPRIPQ8IWB1 547 aa19.12■□□□□ 0.65
C9orf47-201ENST00000334490 STAC3Q96MF2 364 aa19.12■□□□□ 0.65
C9orf47-201ENST00000334490 TAOK2Q9UL54 1235 aa19.11■□□□□ 0.65
C9orf47-201ENST00000334490 LAMC3Q9Y6N6 1575 aa19.1■□□□□ 0.65
C9orf47-201ENST00000334490 RAPGEF3O95398 923 aa19.1■□□□□ 0.65
C9orf47-201ENST00000334490 SMC4Q9NTJ3 1288 aa19.1■□□□□ 0.65
C9orf47-201ENST00000334490 CENPJQ9HC77 1338 aaPredicted RBP19.1■□□□□ 0.65
C9orf47-201ENST00000334490 PSME1Q06323 249 aa19.1■□□□□ 0.65
C9orf47-201ENST00000334490 SCAPERQ9BY12 1400 aa19.09■□□□□ 0.65
C9orf47-201ENST00000334490 RRP7AQ9Y3A4 280 aaKnown RBP19.09■□□□□ 0.65
C9orf47-201ENST00000334490 MYBBP1AQ9BQG0 1328 aaKnown RBP19.09■□□□□ 0.65
C9orf47-201ENST00000334490 TMEM132EQ6IEE7 984 aa19.09■□□□□ 0.65
C9orf47-201ENST00000334490 EFCAB5A4FU69 1503 aa19.08■□□□□ 0.65
C9orf47-201ENST00000334490 TROQ12816 1431 aaPredicted RBP19.08■□□□□ 0.65
C9orf47-201ENST00000334490 EVA1CP58658 441 aa19.08■□□□□ 0.65
C9orf47-201ENST00000334490 KIAA0586Q9BVV6 1533 aa19.07■□□□□ 0.64
C9orf47-201ENST00000334490 NAP1L2Q9ULW6 460 aaPredicted RBP19.06■□□□□ 0.64
C9orf47-201ENST00000334490 TPRNQ4KMQ1 711 aa19.05■□□□□ 0.64
C9orf47-201ENST00000334490 CLUAP1Q96AJ1 413 aa19.05■□□□□ 0.64
C9orf47-201ENST00000334490 ABCA10Q8WWZ4 1543 aa19.05■□□□□ 0.64
C9orf47-201ENST00000334490 SLC4A10Q6U841 1118 aa19.05■□□□□ 0.64
C9orf47-201ENST00000334490 TXNDC2Q86VQ3 553 aa19.05■□□□□ 0.64
C9orf47-201ENST00000334490 ATF3P18847 181 aa19.04■□□□□ 0.64
C9orf47-201ENST00000334490 PRKRIP1Q9H875 184 aaPredicted RBP19.04■□□□□ 0.64
C9orf47-201ENST00000334490 CHMP3Q9Y3E7 222 aa19.02■□□□□ 0.64
C9orf47-201ENST00000334490 CFAP70Q5T0N1 1121 aa19.02■□□□□ 0.63
C9orf47-201ENST00000334490 PDE3BQ13370 1112 aa19.01■□□□□ 0.63
C9orf47-201ENST00000334490 C1orf141Q5JVX7 400 aa19.01■□□□□ 0.63
C9orf47-201ENST00000334490 RWDD1Q9H446 243 aaPredicted RBP19.01■□□□□ 0.63
C9orf47-201ENST00000334490 ELL2O00472 640 aaPredicted RBP19.01■□□□□ 0.63
C9orf47-201ENST00000334490 C9orf84Q5VXU9 1444 aa19■□□□□ 0.63
C9orf47-201ENST00000334490 ZRSR1Q15695 479 aaKnown RBP19■□□□□ 0.63
C9orf47-201ENST00000334490 PLEKHH2Q8IVE3 1493 aa19■□□□□ 0.63
C9orf47-201ENST00000334490 HDAC5Q9UQL6 1122 aa19■□□□□ 0.63
C9orf47-201ENST00000334490 TEFQ10587 303 aa18.99■□□□□ 0.63
C9orf47-201ENST00000334490 HSP90AB1P08238 724 aaKnown RBP18.98■□□□□ 0.63
C9orf47-201ENST00000334490 TAF7LQ5H9L4 462 aa18.98■□□□□ 0.63
C9orf47-201ENST00000334490 MIA2Q96PC5 1412 aa18.98■□□□□ 0.63
C9orf47-201ENST00000334490 CABP2Q9NPB3 220 aa18.98■□□□□ 0.63
C9orf47-201ENST00000334490 DIAPH1O60610 1272 aaKnown RBP18.97■□□□□ 0.63
C9orf47-201ENST00000334490 GTF2E1P29083 439 aaPredicted RBP18.97■□□□□ 0.63
C9orf47-201ENST00000334490 TMX4Q9H1E5 349 aaPredicted RBP18.97■□□□□ 0.63
C9orf47-201ENST00000334490 EHBP1L1Q8N3D4 1523 aa18.96■□□□□ 0.63
C9orf47-201ENST00000334490 MCCP23508 829 aa18.96■□□□□ 0.63
C9orf47-201ENST00000334490 GORABQ5T7V8 394 aa18.96■□□□□ 0.63
C9orf47-201ENST00000334490 THEMISQ8N1K5 641 aaPredicted RBP18.96■□□□□ 0.63
C9orf47-201ENST00000334490 CDK11BP21127 795 aaKnown RBP18.96■□□□□ 0.63
C9orf47-201ENST00000334490 ANP32EQ9BTT0 268 aa18.95■□□□□ 0.62
C9orf47-201ENST00000334490 HMMRO75330 724 aa18.94■□□□□ 0.62
C9orf47-201ENST00000334490 APAF1O14727 1248 aa18.94■□□□□ 0.62
C9orf47-201ENST00000334490 KIAA1211Q6ZU35 1233 aa18.94■□□□□ 0.62
C9orf47-201ENST00000334490 GGNBP2Q9H3C7 697 aa18.94■□□□□ 0.62
C9orf47-201ENST00000334490 PROSER2Q86WR7 435 aaPredicted RBP18.93■□□□□ 0.62
C9orf47-201ENST00000334490 CFAP44Q96MT7 982 aa18.93■□□□□ 0.62
C9orf47-201ENST00000334490 SLC52A1Q9NWF4 448 aa18.93■□□□□ 0.62
C9orf47-201ENST00000334490 NUTM2GQ5VZR2 741 aa18.93■□□□□ 0.62
C9orf47-201ENST00000334490 HECW1Q76N89 1606 aa18.93■□□□□ 0.62
C9orf47-201ENST00000334490 RRBP1Q9P2E9 1410 aaKnown RBP18.92■□□□□ 0.62
C9orf47-201ENST00000334490 ISY1Q9ULR0 285 aaKnown RBP18.91■□□□□ 0.62
C9orf47-201ENST00000334490 NLRP6P59044 892 aa18.91■□□□□ 0.62
C9orf47-201ENST00000334490 BCL2L13Q9BXK5 485 aa18.91■□□□□ 0.62
C9orf47-201ENST00000334490 PMFBP1Q8TBY8 1022 aa18.91■□□□□ 0.62
C9orf47-201ENST00000334490 KIF7Q2M1P5 1343 aa18.91■□□□□ 0.62
C9orf47-201ENST00000334490 IQGAP2Q13576 1575 aa18.9■□□□□ 0.62
C9orf47-201ENST00000334490 CDK13Q14004 1512 aaKnown RBP18.9■□□□□ 0.62
C9orf47-201ENST00000334490 TULP1O00294 542 aaPredicted RBP18.9■□□□□ 0.62
C9orf47-201ENST00000334490 HFM1A2PYH4 1435 aa18.9■□□□□ 0.62
C9orf47-201ENST00000334490 GRIN2AQ12879 1464 aa18.89■□□□□ 0.62
C9orf47-201ENST00000334490 EPRSP07814 1512 aaKnown RBP18.89■□□□□ 0.62
C9orf47-201ENST00000334490 URB2Q14146 1524 aaKnown RBP18.89■□□□□ 0.62
C9orf47-201ENST00000334490 ERICH6BQ5W0A0 696 aa18.89■□□□□ 0.62
C9orf47-201ENST00000334490 HSCBQ8IWL3 235 aa18.89■□□□□ 0.62
C9orf47-201ENST00000334490 TTC5Q8N0Z6 440 aa18.89■□□□□ 0.62
C9orf47-201ENST00000334490 MAGI1Q96QZ7 1491 aaPredicted RBP18.89■□□□□ 0.61
C9orf47-201ENST00000334490 MEX3CQ5U5Q3 659 aaKnown RBP18.89■□□□□ 0.61
C9orf47-201ENST00000334490 NBPF1Q3BBV0 1214 aa18.88■□□□□ 0.61
C9orf47-201ENST00000334490 PRAM1Q96QH2 718 aa18.88■□□□□ 0.61
C9orf47-201ENST00000334490 SYTL4Q96C24 671 aaPredicted RBP18.88■□□□□ 0.61
C9orf47-201ENST00000334490 ZNF608Q9ULD9 1512 aaPredicted RBP18.87■□□□□ 0.61
C9orf47-201ENST00000334490 E9PSI1 815 aa18.87■□□□□ 0.61
C9orf47-201ENST00000334490 PLB1Q6P1J6 1458 aa18.87■□□□□ 0.61
C9orf47-201ENST00000334490 CCDC7Q96M83 1385 aa18.87■□□□□ 0.61
C9orf47-201ENST00000334490 ESCO1Q5FWF5 840 aa18.86■□□□□ 0.61
C9orf47-201ENST00000334490 RIPK4P57078 832 aa18.86■□□□□ 0.61
C9orf47-201ENST00000334490 CD109Q6YHK3 1445 aa18.86■□□□□ 0.61
C9orf47-201ENST00000334490 EIF2S2P20042 333 aaKnown RBP18.86■□□□□ 0.61
C9orf47-201ENST00000334490 RAPGEF4Q8WZA2 1011 aa18.86■□□□□ 0.61
C9orf47-201ENST00000334490 SLC26A8Q96RN1 970 aa18.86■□□□□ 0.61
C9orf47-201ENST00000334490 NLRP2Q9NX02 1062 aa18.86■□□□□ 0.61
C9orf47-201ENST00000334490 NGEFQ8N5V2 710 aa18.85■□□□□ 0.61
C9orf47-201ENST00000334490 POGZQ7Z3K3 1410 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms