RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 POTEJP0CG39 1038 aa12.79□□□□□ -0.36
LSAMP-201ENST00000333617 PCDHB8Q9UN66 801 aa12.79□□□□□ -0.36
LSAMP-201ENST00000333617 TRIM35Q9UPQ4 493 aa12.79□□□□□ -0.36
LSAMP-201ENST00000333617 ARID3CA6NKF2 412 aa12.78□□□□□ -0.36
LSAMP-201ENST00000333617 ZNF467Q7Z7K2 595 aaPredicted RBP12.78□□□□□ -0.36
LSAMP-201ENST00000333617 ADCY10Q96PN6 1610 aa12.78□□□□□ -0.36
LSAMP-201ENST00000333617 PLB1Q6P1J6 1458 aa12.78□□□□□ -0.36
LSAMP-201ENST00000333617 GCC2Q8IWJ2 1684 aa12.77□□□□□ -0.36
LSAMP-201ENST00000333617 ITSN2Q9NZM3 1697 aa12.77□□□□□ -0.36
LSAMP-201ENST00000333617 ABCA8O94911 1581 aa12.77□□□□□ -0.36
LSAMP-201ENST00000333617 MIA2Q96PC5 1412 aa12.77□□□□□ -0.37
LSAMP-201ENST00000333617 SHROOM2Q13796 1616 aa12.77□□□□□ -0.37
LSAMP-201ENST00000333617 CDK11AQ9UQ88 783 aaPredicted RBP12.77□□□□□ -0.37
LSAMP-201ENST00000333617 MAPKBP1O60336 1514 aa12.76□□□□□ -0.37
LSAMP-201ENST00000333617 IER5LQ5T953 404 aa12.76□□□□□ -0.37
LSAMP-201ENST00000333617 ZNF316A6NFI3 1004 aaPredicted RBP12.75□□□□□ -0.37
LSAMP-201ENST00000333617 HFM1A2PYH4 1435 aa12.75□□□□□ -0.37
LSAMP-201ENST00000333617 PTPRKQ15262 1439 aa12.75□□□□□ -0.37
LSAMP-201ENST00000333617 SCUBE2Q9NQ36 999 aa12.74□□□□□ -0.37
LSAMP-201ENST00000333617 TROQ12816 1431 aaPredicted RBP12.73□□□□□ -0.37
LSAMP-201ENST00000333617 PRG4Q92954 1404 aaPredicted RBP12.73□□□□□ -0.37
LSAMP-201ENST00000333617 SEC24BO95487 1268 aa12.73□□□□□ -0.37
LSAMP-201ENST00000333617 KIF14Q15058 1648 aa12.72□□□□□ -0.37
LSAMP-201ENST00000333617 CDC42BPAQ5VT25 1732 aa12.71□□□□□ -0.37
LSAMP-201ENST00000333617 NAIPQ13075 1403 aa12.7□□□□□ -0.38
LSAMP-201ENST00000333617 DNMT1P26358 1616 aaKnown RBP12.7□□□□□ -0.38
LSAMP-201ENST00000333617 POTEFA5A3E0 1075 aa12.7□□□□□ -0.38
LSAMP-201ENST00000333617 DIEXFQ68CQ4 756 aaKnown RBP12.7□□□□□ -0.38
LSAMP-201ENST00000333617 AKNAQ7Z591 1439 aa12.68□□□□□ -0.38
LSAMP-201ENST00000333617 ADGBQ8N7X0 1667 aa12.68□□□□□ -0.38
LSAMP-201ENST00000333617 COLQQ9Y215 455 aaPredicted RBP12.68□□□□□ -0.38
LSAMP-201ENST00000333617 PTPRGP23470 1445 aa12.68□□□□□ -0.38
LSAMP-201ENST00000333617 CROCC2H7BZ55 1655 aa12.67□□□□□ -0.38
LSAMP-201ENST00000333617 ATP10BO94823 1461 aa12.67□□□□□ -0.38
LSAMP-201ENST00000333617 UACAQ9BZF9 1416 aa12.66□□□□□ -0.38
LSAMP-201ENST00000333617 CLASP1Q7Z460 1538 aa12.66□□□□□ -0.38
LSAMP-201ENST00000333617 DAPK1P53355 1430 aa12.65□□□□□ -0.38
LSAMP-201ENST00000333617 PSEN1P49768 467 aa12.64□□□□□ -0.39
LSAMP-201ENST00000333617 CAMSAP2Q08AD1 1489 aa12.64□□□□□ -0.39
LSAMP-201ENST00000333617 GPATCH8Q9UKJ3 1502 aaKnown RBP12.64□□□□□ -0.39
LSAMP-201ENST00000333617 PLEKHD1A6NEE1 506 aa12.64□□□□□ -0.39
LSAMP-201ENST00000333617 CHIC2Q9UKJ5 165 aa12.64□□□□□ -0.39
LSAMP-201ENST00000333617 ERCC6L2Q5T890 1561 aa12.63□□□□□ -0.39
LSAMP-201ENST00000333617 KDM6BO15054 1643 aa12.63□□□□□ -0.39
LSAMP-201ENST00000333617 PLCG2P16885 1265 aa12.63□□□□□ -0.39
LSAMP-201ENST00000333617 PDAP1Q13442 181 aaKnown RBP12.63□□□□□ -0.39
LSAMP-201ENST00000333617 RRP7BPQ9NSQ0 103 aa12.62□□□□□ -0.39
LSAMP-201ENST00000333617 ABCC5O15440 1437 aa12.62□□□□□ -0.39
LSAMP-201ENST00000333617 ROCK1Q13464 1354 aa12.61□□□□□ -0.39
LSAMP-201ENST00000333617 ABCC10Q5T3U5 1492 aa12.61□□□□□ -0.39
LSAMP-201ENST00000333617 CDC42BPBQ9Y5S2 1711 aa12.61□□□□□ -0.39
LSAMP-201ENST00000333617 CFDP1Q9UEE9 299 aaPredicted RBP12.6□□□□□ -0.39
LSAMP-201ENST00000333617 IRX5P78411 483 aaPredicted RBP12.6□□□□□ -0.39
LSAMP-201ENST00000333617 GOLGA2Q08379 1002 aa12.6□□□□□ -0.39
LSAMP-201ENST00000333617 SIN3AQ96ST3 1273 aa12.6□□□□□ -0.39
LSAMP-201ENST00000333617 TIMELESSQ9UNS1 1208 aa12.6□□□□□ -0.39
LSAMP-201ENST00000333617 ZNF644Q9H582 1327 aaPredicted RBP12.6□□□□□ -0.39
LSAMP-201ENST00000333617 ABCC2Q92887 1545 aa12.6□□□□□ -0.39
LSAMP-201ENST00000333617 PREX2Q70Z35 1606 aa12.59□□□□□ -0.39
LSAMP-201ENST00000333617 NEUROD1Q13562 356 aa12.59□□□□□ -0.39
LSAMP-201ENST00000333617 ACIN1Q9UKV3 1341 aaKnown RBP12.58□□□□□ -0.4
LSAMP-201ENST00000333617 OCEL1Q9H607 264 aa12.57□□□□□ -0.4
LSAMP-201ENST00000333617 MYO5CQ9NQX4 1742 aa12.57□□□□□ -0.4
LSAMP-201ENST00000333617 ZCCHC11Q5TAX3 1644 aaKnown RBP12.56□□□□□ -0.4
LSAMP-201ENST00000333617 MKRN3Q13064 507 aaKnown RBP12.56□□□□□ -0.4
LSAMP-201ENST00000333617 ZNF777Q9ULD5 760 aaPredicted RBP12.56□□□□□ -0.4
LSAMP-201ENST00000333617 ADGRL2O95490 1459 aa12.55□□□□□ -0.4
LSAMP-201ENST00000333617 TRIM52Q96A61 297 aa12.54□□□□□ -0.4
LSAMP-201ENST00000333617 ARHGEF5Q12774 1597 aa12.53□□□□□ -0.4
LSAMP-201ENST00000333617 SHANK2Q9UPX8 1470 aa12.53□□□□□ -0.4
LSAMP-201ENST00000333617 TTC37Q6PGP7 1564 aa12.52□□□□□ -0.4
LSAMP-201ENST00000333617 TONSLQ96HA7 1378 aa12.52□□□□□ -0.41
LSAMP-201ENST00000333617 UHRF1BP1LA0JNW5 1464 aa12.52□□□□□ -0.41
LSAMP-201ENST00000333617 DENND4BO75064 1496 aaPredicted RBP12.51□□□□□ -0.41
LSAMP-201ENST00000333617 SAMD9LQ8IVG5 1584 aa12.51□□□□□ -0.41
LSAMP-201ENST00000333617 NCOA1Q15788 1441 aa12.51□□□□□ -0.41
LSAMP-201ENST00000333617 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.5□□□□□ -0.41
LSAMP-201ENST00000333617 MPHOSPH9Q99550 1183 aa12.5□□□□□ -0.41
LSAMP-201ENST00000333617 DNAJC5Q9H3Z4 198 aa12.5□□□□□ -0.41
LSAMP-201ENST00000333617 ANKRD30AQ9BXX3 1397 aa12.5□□□□□ -0.41
LSAMP-201ENST00000333617 PPP1R15AO75807 674 aaPredicted RBP12.49□□□□□ -0.41
LSAMP-201ENST00000333617 RIOK3O14730 519 aaKnown RBP12.48□□□□□ -0.41
LSAMP-201ENST00000333617 KDM5BQ9UGL1 1544 aa12.48□□□□□ -0.41
LSAMP-201ENST00000333617 C9orf84Q5VXU9 1444 aa12.48□□□□□ -0.41
LSAMP-201ENST00000333617 CABP2Q9NPB3 220 aa12.47□□□□□ -0.41
LSAMP-201ENST00000333617 ARHGAP5Q13017 1502 aa12.47□□□□□ -0.41
LSAMP-201ENST00000333617 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.47□□□□□ -0.41
LSAMP-201ENST00000333617 CCDC141Q6ZP82 1450 aa12.46□□□□□ -0.42
LSAMP-201ENST00000333617 TSPY4P0CV99 314 aa12.45□□□□□ -0.42
LSAMP-201ENST00000333617 TSPY10P0CW01 314 aa12.45□□□□□ -0.42
LSAMP-201ENST00000333617 MBD5Q9P267 1494 aa12.45□□□□□ -0.42
LSAMP-201ENST00000333617 PDCD7Q8N8D1 485 aaKnown RBP12.44□□□□□ -0.42
LSAMP-201ENST00000333617 RNF25Q96BH1 459 aaPredicted RBP12.44□□□□□ -0.42
LSAMP-201ENST00000333617 SYCP2Q9BX26 1530 aa12.44□□□□□ -0.42
LSAMP-201ENST00000333617 MAST1Q9Y2H9 1570 aa12.44□□□□□ -0.42
LSAMP-201ENST00000333617 ANKRD50Q9ULJ7 1429 aa12.44□□□□□ -0.42
LSAMP-201ENST00000333617 PZPP20742 1482 aa12.43□□□□□ -0.42
LSAMP-201ENST00000333617 PLEKHH2Q8IVE3 1493 aa12.43□□□□□ -0.42
LSAMP-201ENST00000333617 VGFO15240 615 aaPredicted RBP12.43□□□□□ -0.42
LSAMP-201ENST00000333617 HNRNPMP52272 730 aaKnown RBP eCLIP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms