RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 AFAP1Q8N556 730 aa25.94■■□□□ 1.74
LAMP1-201ENST00000332556 CCDC144AA2RUR9 1427 aa25.92■■□□□ 1.74
LAMP1-201ENST00000332556 SALL2Q9Y467 1007 aaPredicted RBP25.91■■□□□ 1.74
LAMP1-201ENST00000332556 RALGAPBQ86X10 1494 aa25.9■■□□□ 1.74
LAMP1-201ENST00000332556 MYT1LQ9UL68 1186 aa25.9■■□□□ 1.74
LAMP1-201ENST00000332556 ABCC2Q92887 1545 aa25.89■■□□□ 1.74
LAMP1-201ENST00000332556 PLA2R1Q13018 1463 aa25.89■■□□□ 1.74
LAMP1-201ENST00000332556 UHRF1BP1Q6BDS2 1440 aa25.88■■□□□ 1.73
LAMP1-201ENST00000332556 FANCIQ9NVI1 1328 aa25.88■■□□□ 1.73
LAMP1-201ENST00000332556 ERICH6Q7L0X2 663 aa25.88■■□□□ 1.73
LAMP1-201ENST00000332556 POLR1AO95602 1720 aaPredicted RBP25.88■■□□□ 1.73
LAMP1-201ENST00000332556 SHROOM2Q13796 1616 aa25.87■■□□□ 1.73
LAMP1-201ENST00000332556 KDM5DQ9BY66 1539 aa25.87■■□□□ 1.73
LAMP1-201ENST00000332556 B4GALNT3Q6L9W6 998 aa25.86■■□□□ 1.73
LAMP1-201ENST00000332556 TRAPPC8Q9Y2L5 1435 aa25.86■■□□□ 1.73
LAMP1-201ENST00000332556 RSPH4AQ5TD94 716 aa25.85■■□□□ 1.73
LAMP1-201ENST00000332556 TMC1Q8TDI8 760 aa25.85■■□□□ 1.73
LAMP1-201ENST00000332556 ZBED9Q6R2W3 1325 aa25.85■■□□□ 1.73
LAMP1-201ENST00000332556 PPP4R2Q9NY27 417 aa25.83■■□□□ 1.73
LAMP1-201ENST00000332556 EFCAB2Q5VUJ9 269 aa25.82■■□□□ 1.72
LAMP1-201ENST00000332556 MYO5CQ9NQX4 1742 aa25.81■■□□□ 1.72
LAMP1-201ENST00000332556 ZCCHC11Q5TAX3 1644 aaKnown RBP25.8■■□□□ 1.72
LAMP1-201ENST00000332556 PRAG1Q86YV5 1406 aa25.78■■□□□ 1.72
LAMP1-201ENST00000332556 A2MP01023 1474 aa25.78■■□□□ 1.72
LAMP1-201ENST00000332556 CC2D1BQ5T0F9 858 aaKnown RBP25.78■■□□□ 1.72
LAMP1-201ENST00000332556 PLCH2O75038 1416 aa25.76■■□□□ 1.71
LAMP1-201ENST00000332556 PNISRQ8TF01 805 aaKnown RBP25.76■■□□□ 1.71
LAMP1-201ENST00000332556 SPAG9O60271 1321 aaKnown RBP25.74■■□□□ 1.71
LAMP1-201ENST00000332556 DISP3Q9P2K9 1392 aa25.73■■□□□ 1.71
LAMP1-201ENST00000332556 ERICH6BQ5W0A0 696 aa25.7■■□□□ 1.7
LAMP1-201ENST00000332556 UNC13BO14795 1591 aa25.68■■□□□ 1.7
LAMP1-201ENST00000332556 TRPM1Q7Z4N2 1603 aa25.67■■□□□ 1.7
LAMP1-201ENST00000332556 CLASP1Q7Z460 1538 aa25.67■■□□□ 1.7
LAMP1-201ENST00000332556 ARID4BQ4LE39 1312 aaPredicted RBP25.67■■□□□ 1.7
LAMP1-201ENST00000332556 TESK2Q96S53 571 aa25.67■■□□□ 1.7
LAMP1-201ENST00000332556 MAST1Q9Y2H9 1570 aa25.66■■□□□ 1.7
LAMP1-201ENST00000332556 PANK3Q9H999 370 aa25.66■■□□□ 1.7
LAMP1-201ENST00000332556 DUOX2Q9NRD8 1548 aa25.66■■□□□ 1.7
LAMP1-201ENST00000332556 KIF3BO15066 747 aa25.65■■□□□ 1.7
LAMP1-201ENST00000332556 MYBBP1AQ9BQG0 1328 aaKnown RBP25.63■■□□□ 1.69
LAMP1-201ENST00000332556 ABCC1P33527 1531 aa25.63■■□□□ 1.69
LAMP1-201ENST00000332556 IQGAP3Q86VI3 1631 aa25.62■■□□□ 1.69
LAMP1-201ENST00000332556 PLXNC1O60486 1568 aa25.62■■□□□ 1.69
LAMP1-201ENST00000332556 NUDCQ9Y266 331 aa25.62■■□□□ 1.69
LAMP1-201ENST00000332556 PER1O15534 1290 aaPredicted RBP25.6■■□□□ 1.69
LAMP1-201ENST00000332556 SCAPERQ9BY12 1400 aa25.6■■□□□ 1.69
LAMP1-201ENST00000332556 SENP3Q9H4L4 574 aaPredicted RBP25.6■■□□□ 1.69
LAMP1-201ENST00000332556 ERBINQ96RT1 1412 aa25.58■■□□□ 1.69
LAMP1-201ENST00000332556 KTN1Q86UP2 1357 aaKnown RBP25.56■■□□□ 1.68
LAMP1-201ENST00000332556 RALBP1Q15311 655 aa25.56■■□□□ 1.68
LAMP1-201ENST00000332556 SMG6Q86US8 1419 aaKnown RBP25.54■■□□□ 1.68
LAMP1-201ENST00000332556 CDCA7LQ96GN5 454 aa25.54■■□□□ 1.68
LAMP1-201ENST00000332556 FANCAO15360 1455 aa25.53■■□□□ 1.68
LAMP1-201ENST00000332556 TMF1P82094 1093 aa25.53■■□□□ 1.68
LAMP1-201ENST00000332556 UHRF1BP1LA0JNW5 1464 aa25.52■■□□□ 1.68
LAMP1-201ENST00000332556 E9PCH4 1651 aa25.52■■□□□ 1.68
LAMP1-201ENST00000332556 GPRASP1Q5JY77 1395 aa25.52■■□□□ 1.68
LAMP1-201ENST00000332556 PAK3O75914 559 aaPredicted RBP25.5■■□□□ 1.67
LAMP1-201ENST00000332556 CHGAP10645 457 aaKnown RBP25.5■■□□□ 1.67
LAMP1-201ENST00000332556 NBR1Q14596 966 aa25.5■■□□□ 1.67
LAMP1-201ENST00000332556 NLRP13Q86W25 1043 aa25.5■■□□□ 1.67
LAMP1-201ENST00000332556 UGGT1Q9NYU2 1555 aa25.5■■□□□ 1.67
LAMP1-201ENST00000332556 BRD4O60885 1362 aaPredicted RBP25.5■■□□□ 1.67
LAMP1-201ENST00000332556 COL17A1Q9UMD9 1497 aaPredicted RBP25.5■■□□□ 1.67
LAMP1-201ENST00000332556 WDR7Q9Y4E6 1490 aa25.5■■□□□ 1.67
LAMP1-201ENST00000332556 ZFYVE16Q7Z3T8 1539 aa25.5■■□□□ 1.67
LAMP1-201ENST00000332556 ATP10AO60312 1499 aa25.5■■□□□ 1.67
LAMP1-201ENST00000332556 MAGI2Q86UL8 1455 aa25.5■■□□□ 1.67
LAMP1-201ENST00000332556 PRDM15P57071 1507 aaPredicted RBP25.48■■□□□ 1.67
LAMP1-201ENST00000332556 LRPPRCP42704 1394 aaKnown RBP25.48■■□□□ 1.67
LAMP1-201ENST00000332556 PARD3Q8TEW0 1356 aa25.48■■□□□ 1.67
LAMP1-201ENST00000332556 CFAP70Q5T0N1 1121 aa25.47■■□□□ 1.67
LAMP1-201ENST00000332556 DEKP35659 375 aaKnown RBP25.46■■□□□ 1.67
LAMP1-201ENST00000332556 NOP58Q9Y2X3 529 aaKnown RBP25.46■■□□□ 1.67
LAMP1-201ENST00000332556 ADGRL1O94910 1474 aa25.46■■□□□ 1.67
LAMP1-201ENST00000332556 ASXL2Q76L83 1435 aa25.45■■□□□ 1.66
LAMP1-201ENST00000332556 CCDC136Q96JN2 1154 aa25.44■■□□□ 1.66
LAMP1-201ENST00000332556 GGT6Q6P531 493 aa25.43■■□□□ 1.66
LAMP1-201ENST00000332556 CLTCL1P53675 1640 aa25.42■■□□□ 1.66
LAMP1-201ENST00000332556 NUTM2DQ5VT03 806 aaPredicted RBP25.42■■□□□ 1.66
LAMP1-201ENST00000332556 ADGRF5Q8IZF2 1346 aa25.42■■□□□ 1.66
LAMP1-201ENST00000332556 ATP7AQ04656 1500 aa25.41■■□□□ 1.66
LAMP1-201ENST00000332556 CFAP65Q6ZU64 1925 aaKnown RBP25.41■■□□□ 1.66
LAMP1-201ENST00000332556 PLIN1O60240 522 aa25.4■■□□□ 1.66
LAMP1-201ENST00000332556 EXOC6Q8TAG9 804 aa25.37■■□□□ 1.65
LAMP1-201ENST00000332556 KNSTRNQ9Y448 316 aa25.37■■□□□ 1.65
LAMP1-201ENST00000332556 KANK1Q14678 1352 aa25.37■■□□□ 1.65
LAMP1-201ENST00000332556 ADAMTS8Q9UP79 889 aa25.37■■□□□ 1.65
LAMP1-201ENST00000332556 RTEL1-TNFRSF6BF6WH68 1400 aa25.36■■□□□ 1.65
LAMP1-201ENST00000332556 MADDQ8WXG6 1647 aa25.36■■□□□ 1.65
LAMP1-201ENST00000332556 EIF2AK4Q9P2K8 1649 aaKnown RBP25.34■■□□□ 1.65
LAMP1-201ENST00000332556 NPM1P06748 294 aaKnown RBP eCLIP25.34■■□□□ 1.65
LAMP1-201ENST00000332556 SPHKAPQ2M3C7 1700 aa25.33■■□□□ 1.65
LAMP1-201ENST00000332556 RCAN3Q9UKA8 241 aa25.33■■□□□ 1.65
LAMP1-201ENST00000332556 TRPM2O94759 1503 aa25.33■■□□□ 1.65
LAMP1-201ENST00000332556 RNF123Q5XPI4 1314 aa25.33■■□□□ 1.64
LAMP1-201ENST00000332556 RAPGEF3O95398 923 aa25.32■■□□□ 1.64
LAMP1-201ENST00000332556 ABCA9Q8IUA7 1624 aa25.31■■□□□ 1.64
LAMP1-201ENST00000332556 RRP1P56182 461 aaKnown RBP25.31■■□□□ 1.64
LAMP1-201ENST00000332556 PTPRTO14522 1441 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms