RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 BCL2L13Q9BXK5 485 aa13.17□□□□□ -0.3
CLN8-201ENST00000331222 KTN1Q86UP2 1357 aaKnown RBP13.17□□□□□ -0.3
CLN8-201ENST00000331222 H3BQV1 296 aa13.17□□□□□ -0.3
CLN8-201ENST00000331222 IFFO2Q5TF58 517 aa13.17□□□□□ -0.3
CLN8-201ENST00000331222 BAZ1BQ9UIG0 1483 aaKnown RBP13.17□□□□□ -0.3
CLN8-201ENST00000331222 RCAN3Q9UKA8 241 aa13.16□□□□□ -0.3
CLN8-201ENST00000331222 MCTP1Q6DN14 999 aa13.16□□□□□ -0.3
CLN8-201ENST00000331222 EIF2S2P20042 333 aaKnown RBP13.16□□□□□ -0.3
CLN8-201ENST00000331222 MTMR7Q9Y216 660 aa13.16□□□□□ -0.3
CLN8-201ENST00000331222 EID1Q9Y6B2 187 aa13.16□□□□□ -0.3
CLN8-201ENST00000331222 FYB1O15117 783 aa13.15□□□□□ -0.3
CLN8-201ENST00000331222 HTATSF1O43719 755 aaKnown RBP13.15□□□□□ -0.3
CLN8-201ENST00000331222 TRAK1Q9UPV9 953 aa13.15□□□□□ -0.3
CLN8-201ENST00000331222 DHX16O60231 1041 aaKnown RBP13.14□□□□□ -0.31
CLN8-201ENST00000331222 ZNF428Q96B54 188 aa13.14□□□□□ -0.31
CLN8-201ENST00000331222 PCMTD1Q96MG8 357 aaPredicted RBP13.14□□□□□ -0.31
CLN8-201ENST00000331222 PPP1R1BQ9UD71 204 aaPredicted RBP13.14□□□□□ -0.31
CLN8-201ENST00000331222 HNRNPMP52272 730 aaKnown RBP eCLIP13.14□□□□□ -0.316e-8■□□□□ 11
CLN8-201ENST00000331222 APPP05067 770 aa13.14□□□□□ -0.31
CLN8-201ENST00000331222 RWDD1Q9H446 243 aaPredicted RBP13.14□□□□□ -0.31
CLN8-201ENST00000331222 KIF27Q86VH2 1401 aa13.13□□□□□ -0.31
CLN8-201ENST00000331222 RB1CC1Q8TDY2 1594 aa13.13□□□□□ -0.31
CLN8-201ENST00000331222 KIF16BQ96L93 1317 aa13.13□□□□□ -0.31
CLN8-201ENST00000331222 KIF3BO15066 747 aa13.13□□□□□ -0.31
CLN8-201ENST00000331222 TCERG1O14776 1098 aaKnown RBP13.12□□□□□ -0.31
CLN8-201ENST00000331222 VPS37DQ86XT2 251 aa13.12□□□□□ -0.31
CLN8-201ENST00000331222 TPM3P06753 285 aa13.12□□□□□ -0.31
CLN8-201ENST00000331222 SYAP1Q96A49 352 aaPredicted RBP13.12□□□□□ -0.31
CLN8-201ENST00000331222 AKAP17AQ02040 695 aaKnown RBP13.12□□□□□ -0.31
CLN8-201ENST00000331222 CALD1Q05682 793 aaKnown RBP13.11□□□□□ -0.31
CLN8-201ENST00000331222 FAM184AQ8NB25 1140 aa13.11□□□□□ -0.31
CLN8-201ENST00000331222 C1orf141Q5JVX7 400 aa13.11□□□□□ -0.31
CLN8-201ENST00000331222 RBM19Q9Y4C8 960 aaKnown RBP13.11□□□□□ -0.31
CLN8-201ENST00000331222 SLC4A3P48751 1232 aa13.11□□□□□ -0.31
CLN8-201ENST00000331222 ZNF592Q92610 1267 aa13.1□□□□□ -0.31
CLN8-201ENST00000331222 ANKRD45Q5TZF3 282 aa13.09□□□□□ -0.31
CLN8-201ENST00000331222 WRNQ14191 1432 aaPredicted RBP eCLIP13.08□□□□□ -0.31
CLN8-201ENST00000331222 WASHC2CQ9Y4E1 1318 aa13.08□□□□□ -0.32
CLN8-201ENST00000331222 CCDC34Q96HJ3 373 aa13.08□□□□□ -0.32
CLN8-201ENST00000331222 NOL10Q9BSC4 688 aaKnown RBP13.08□□□□□ -0.32
CLN8-201ENST00000331222 PLIN1O60240 522 aa13.08□□□□□ -0.32
CLN8-201ENST00000331222 TSR1Q2NL82 804 aaKnown RBP13.08□□□□□ -0.32
CLN8-201ENST00000331222 FAM177BA6PVY3 158 aa13.07□□□□□ -0.32
CLN8-201ENST00000331222 PMFBP1Q8TBY8 1022 aa13.07□□□□□ -0.32
CLN8-201ENST00000331222 CFAP44Q96MT7 982 aa13.07□□□□□ -0.32
CLN8-201ENST00000331222 HMMRO75330 724 aa13.07□□□□□ -0.32
CLN8-201ENST00000331222 GOLGA6L3A6NEY3 463 aa13.06□□□□□ -0.32
CLN8-201ENST00000331222 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.06□□□□□ -0.32
CLN8-201ENST00000331222 NUP155O75694 1391 aa13.06□□□□□ -0.32
CLN8-201ENST00000331222 NUTM2GQ5VZR2 741 aa13.05□□□□□ -0.32
CLN8-201ENST00000331222 TERF2IPQ9NYB0 399 aa13.04□□□□□ -0.32
CLN8-201ENST00000331222 KAT6BQ8WYB5 2073 aa13.04□□□□□ -0.32
CLN8-201ENST00000331222 CSPP1Q1MSJ5 1256 aa13.04□□□□□ -0.32
CLN8-201ENST00000331222 AMOTL1Q8IY63 956 aa13.03□□□□□ -0.32
CLN8-201ENST00000331222 USP35Q9P2H5 1018 aa13.03□□□□□ -0.32
CLN8-201ENST00000331222 GOLGA6L19H0YKK7 550 aa13.03□□□□□ -0.32
CLN8-201ENST00000331222 CCDC27Q2M243 656 aa13.03□□□□□ -0.32
CLN8-201ENST00000331222 C9orf78Q9NZ63 289 aaPredicted RBP13.03□□□□□ -0.32
CLN8-201ENST00000331222 SYNE3Q6ZMZ3 975 aa13.03□□□□□ -0.32
CLN8-201ENST00000331222 CUX2O14529 1486 aa13.03□□□□□ -0.32
CLN8-201ENST00000331222 TPM2P07951 284 aa13.02□□□□□ -0.32
CLN8-201ENST00000331222 CCDC43Q96MW1 224 aaKnown RBP13.02□□□□□ -0.32
CLN8-201ENST00000331222 ST18O60284 1047 aa13.02□□□□□ -0.33
CLN8-201ENST00000331222 PTMSP20962 102 aa13.02□□□□□ -0.33
CLN8-201ENST00000331222 NFXL1Q6ZNB6 911 aa13.02□□□□□ -0.33
CLN8-201ENST00000331222 TTC5Q8N0Z6 440 aa13.02□□□□□ -0.33
CLN8-201ENST00000331222 SKIDA1Q1XH10 827 aa13.02□□□□□ -0.33
CLN8-201ENST00000331222 ARHGAP35Q9NRY4 1499 aa13.02□□□□□ -0.33
CLN8-201ENST00000331222 CENPJQ9HC77 1338 aaPredicted RBP13.02□□□□□ -0.33
CLN8-201ENST00000331222 EEA1Q15075 1411 aa13.02□□□□□ -0.33
CLN8-201ENST00000331222 STK11IPQ8N1F8 1099 aa13.01□□□□□ -0.33
CLN8-201ENST00000331222 MPHOSPH9Q99550 1183 aa13.01□□□□□ -0.33
CLN8-201ENST00000331222 NAP1L1P55209 391 aaKnown RBP13.01□□□□□ -0.33
CLN8-201ENST00000331222 PSME1Q06323 249 aa13.01□□□□□ -0.33
CLN8-201ENST00000331222 ANO2Q9NQ90 1003 aa13.01□□□□□ -0.33
CLN8-201ENST00000331222 AIMP1Q12904 312 aaKnown RBP13.01□□□□□ -0.33
CLN8-201ENST00000331222 ZFYVE27Q5T4F4 411 aa13□□□□□ -0.33
CLN8-201ENST00000331222 CEP164Q9UPV0 1460 aa13□□□□□ -0.33
CLN8-201ENST00000331222 MINK1Q8N4C8 1332 aaPredicted RBP13□□□□□ -0.33
CLN8-201ENST00000331222 IBSPP21815 317 aaPredicted RBP13□□□□□ -0.33
CLN8-201ENST00000331222 TEFQ10587 303 aa13□□□□□ -0.33
CLN8-201ENST00000331222 BAZ1AQ9NRL2 1556 aaPredicted RBP12.99□□□□□ -0.33
CLN8-201ENST00000331222 IKQ13123 557 aaPredicted RBP12.99□□□□□ -0.33
CLN8-201ENST00000331222 BECN2A8MW95 431 aa12.99□□□□□ -0.33
CLN8-201ENST00000331222 TRIM29Q14134 588 aa12.99□□□□□ -0.33
CLN8-201ENST00000331222 PRDM2Q13029 1718 aa12.99□□□□□ -0.33
CLN8-201ENST00000331222 RBM33Q96EV2 1170 aaKnown RBP12.98□□□□□ -0.33
CLN8-201ENST00000331222 CYB5RLQ6IPT4 315 aa12.98□□□□□ -0.33
CLN8-201ENST00000331222 PHF14O94880 888 aa12.98□□□□□ -0.33
CLN8-201ENST00000331222 TMEM132AQ24JP5 1023 aa12.97□□□□□ -0.33
CLN8-201ENST00000331222 DIAPH3Q9NSV4 1193 aa12.97□□□□□ -0.33
CLN8-201ENST00000331222 TTLL5Q6EMB2 1281 aa12.97□□□□□ -0.33
CLN8-201ENST00000331222 EIF3AQ14152 1382 aaKnown RBP12.97□□□□□ -0.33
CLN8-201ENST00000331222 CARMIL1Q5VZK9 1371 aa12.97□□□□□ -0.33
CLN8-201ENST00000331222 COG3Q96JB2 828 aa12.97□□□□□ -0.33
CLN8-201ENST00000331222 KANK4Q5T7N3 995 aaPredicted RBP12.96□□□□□ -0.33
CLN8-201ENST00000331222 SETD5Q9C0A6 1442 aa12.96□□□□□ -0.33
CLN8-201ENST00000331222 TPM1P09493 284 aa12.95□□□□□ -0.34
CLN8-201ENST00000331222 ODF2Q5BJF6 829 aa12.95□□□□□ -0.34
CLN8-201ENST00000331222 ABCC8Q09428 1581 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms