RNA–Protein interactions for RNA: ENST00000330953.5

CCR4-201, Transcript of C-C motif chemokine receptor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR4, Length 3,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR4-201ENST00000330953 A2MP01023 1474 aa13.45□□□□□ -0.26
CCR4-201ENST00000330953 PTPRTO14522 1441 aa13.44□□□□□ -0.26
CCR4-201ENST00000330953 TRPM2O94759 1503 aa13.44□□□□□ -0.26
CCR4-201ENST00000330953 LAMC1P11047 1609 aa13.44□□□□□ -0.26
CCR4-201ENST00000330953 KIAA1210Q9ULL0 1709 aa13.43□□□□□ -0.26
CCR4-201ENST00000330953 ANKRD50Q9ULJ7 1429 aa13.41□□□□□ -0.26
CCR4-201ENST00000330953 ABCC3O15438 1527 aa13.41□□□□□ -0.26
CCR4-201ENST00000330953 COL17A1Q9UMD9 1497 aaPredicted RBP13.41□□□□□ -0.26
CCR4-201ENST00000330953 ZNF142P52746 1687 aaPredicted RBP13.41□□□□□ -0.26
CCR4-201ENST00000330953 SPATA31D1Q6ZQQ2 1576 aa13.41□□□□□ -0.26
CCR4-201ENST00000330953 CYB5RLQ6IPT4 315 aa13.4□□□□□ -0.26
CCR4-201ENST00000330953 PREX1Q8TCU6 1659 aa13.39□□□□□ -0.27
CCR4-201ENST00000330953 RAB3GAP2Q9H2M9 1393 aa13.39□□□□□ -0.27
CCR4-201ENST00000330953 KIF15Q9NS87 1388 aa13.38□□□□□ -0.27
CCR4-201ENST00000330953 DHX57Q6P158 1386 aaKnown RBP13.38□□□□□ -0.27
CCR4-201ENST00000330953 RANGAP1P46060 587 aaPredicted RBP13.36□□□□□ -0.27
CCR4-201ENST00000330953 PCGF6Q9BYE7 350 aa13.36□□□□□ -0.27
CCR4-201ENST00000330953 KCNA4P22459 653 aa13.36□□□□□ -0.27
CCR4-201ENST00000330953 TIMELESSQ9UNS1 1208 aa13.36□□□□□ -0.27
CCR4-201ENST00000330953 MADDQ8WXG6 1647 aa13.35□□□□□ -0.27
CCR4-201ENST00000330953 ZNF644Q9H582 1327 aaPredicted RBP13.34□□□□□ -0.27
CCR4-201ENST00000330953 PPARGC1BQ86YN6 1023 aaKnown RBP13.34□□□□□ -0.27
CCR4-201ENST00000330953 CNTLNQ9NXG0 1405 aa13.33□□□□□ -0.27
CCR4-201ENST00000330953 FER1L4A9Z1Z3 1794 aa13.33□□□□□ -0.28
CCR4-201ENST00000330953 NOS1P29475 1434 aa13.33□□□□□ -0.28
CCR4-201ENST00000330953 PRKCSHP14314 528 aaPredicted RBP13.32□□□□□ -0.28
CCR4-201ENST00000330953 KIF1BO60333 1816 aa13.32□□□□□ -0.28
CCR4-201ENST00000330953 UGGT1Q9NYU2 1555 aa13.31□□□□□ -0.28
CCR4-201ENST00000330953 ADGRB3O60242 1522 aa13.31□□□□□ -0.28
CCR4-201ENST00000330953 PPLO60437 1756 aa13.31□□□□□ -0.28
CCR4-201ENST00000330953 POLR1AO95602 1720 aaPredicted RBP13.31□□□□□ -0.28
CCR4-201ENST00000330953 NRXN1Q9ULB1 1477 aa13.3□□□□□ -0.28
CCR4-201ENST00000330953 SYNMO15061 1565 aa13.3□□□□□ -0.28
CCR4-201ENST00000330953 SPAG9O60271 1321 aaKnown RBP13.29□□□□□ -0.28
CCR4-201ENST00000330953 CLTCQ00610 1675 aaKnown RBP13.29□□□□□ -0.28
CCR4-201ENST00000330953 C3P01024 1663 aa13.29□□□□□ -0.28
CCR4-201ENST00000330953 ANKRD30BQ9BXX2 1392 aa13.28□□□□□ -0.28
CCR4-201ENST00000330953 FAM69CQ0P6D2 419 aa13.28□□□□□ -0.28
CCR4-201ENST00000330953 CLTCL1P53675 1640 aa13.28□□□□□ -0.28
CCR4-201ENST00000330953 UHRF1BP1Q6BDS2 1440 aa13.27□□□□□ -0.28
CCR4-201ENST00000330953 YEATS2Q9ULM3 1422 aa13.27□□□□□ -0.29
CCR4-201ENST00000330953 PELP1Q8IZL8 1130 aaKnown RBP13.27□□□□□ -0.29
CCR4-201ENST00000330953 NPATQ14207 1427 aa13.27□□□□□ -0.29
CCR4-201ENST00000330953 PLA2R1Q13018 1463 aa13.26□□□□□ -0.29
CCR4-201ENST00000330953 TSPY4P0CV99 314 aa13.26□□□□□ -0.29
CCR4-201ENST00000330953 TSPY10P0CW01 314 aa13.26□□□□□ -0.29
CCR4-201ENST00000330953 MYOM2P54296 1465 aa13.26□□□□□ -0.29
CCR4-201ENST00000330953 TMEM131LA2VDJ0 1609 aa13.26□□□□□ -0.29
CCR4-201ENST00000330953 PRAG1Q86YV5 1406 aa13.26□□□□□ -0.29
CCR4-201ENST00000330953 SETD1AO15047 1707 aaKnown RBP13.25□□□□□ -0.29
CCR4-201ENST00000330953 ATP1B4Q9UN42 357 aaPredicted RBP13.24□□□□□ -0.29
CCR4-201ENST00000330953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.24□□□□□ -0.29
CCR4-201ENST00000330953 HNRNPMP52272 730 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCR4-201ENST00000330953 HNRNPUL2Q1KMD3 747 aaKnown RBP13.24□□□□□ -0.29
CCR4-201ENST00000330953 ZFYVE9O95405 1425 aa13.23□□□□□ -0.29
CCR4-201ENST00000330953 MYO3AQ8NEV4 1616 aa13.23□□□□□ -0.29
CCR4-201ENST00000330953 SETBP1Q9Y6X0 1596 aa13.23□□□□□ -0.29
CCR4-201ENST00000330953 UBR1Q8IWV7 1749 aa13.22□□□□□ -0.29
CCR4-201ENST00000330953 SPATA31E1Q6ZUB1 1445 aa13.21□□□□□ -0.29
CCR4-201ENST00000330953 STAC3Q96MF2 364 aa13.21□□□□□ -0.29
CCR4-201ENST00000330953 TRPM1Q7Z4N2 1603 aa13.21□□□□□ -0.29
CCR4-201ENST00000330953 KNDC1Q76NI1 1749 aa13.21□□□□□ -0.29
CCR4-201ENST00000330953 KCNH8Q96L42 1107 aa13.2□□□□□ -0.3
CCR4-201ENST00000330953 ERVK-7P63135 1459 aa13.2□□□□□ -0.3
CCR4-201ENST00000330953 FAM50AQ14320 339 aaKnown RBP13.18□□□□□ -0.3
CCR4-201ENST00000330953 ZEB1P37275 1124 aaPredicted RBP13.18□□□□□ -0.3
CCR4-201ENST00000330953 IQGAP1P46940 1657 aa13.17□□□□□ -0.3
CCR4-201ENST00000330953 KANK1Q14678 1352 aa13.17□□□□□ -0.3
CCR4-201ENST00000330953 SLIT1O75093 1534 aa13.17□□□□□ -0.3
CCR4-201ENST00000330953 NLRP1Q9C000 1473 aa13.17□□□□□ -0.3
CCR4-201ENST00000330953 DIP2AQ14689 1571 aa13.16□□□□□ -0.3
CCR4-201ENST00000330953 NEXMIFQ5QGS0 1516 aa13.15□□□□□ -0.3
CCR4-201ENST00000330953 AFAP1Q8N556 730 aa13.15□□□□□ -0.3
CCR4-201ENST00000330953 ARHGAP23Q9P227 1491 aa13.14□□□□□ -0.31
CCR4-201ENST00000330953 MYO5BQ9ULV0 1848 aa13.13□□□□□ -0.31
CCR4-201ENST00000330953 ARID3CA6NKF2 412 aa13.12□□□□□ -0.31
CCR4-201ENST00000330953 MPHOSPH9Q99550 1183 aa13.11□□□□□ -0.31
CCR4-201ENST00000330953 RIMS1Q86UR5 1692 aaKnown RBP13.1□□□□□ -0.31
CCR4-201ENST00000330953 NRXN3Q9Y4C0 1643 aa13.1□□□□□ -0.31
CCR4-201ENST00000330953 RALGAPBQ86X10 1494 aa13.1□□□□□ -0.31
CCR4-201ENST00000330953 GPRASP1Q5JY77 1395 aa13.1□□□□□ -0.31
CCR4-201ENST00000330953 TTBK1Q5TCY1 1321 aaPredicted RBP13.09□□□□□ -0.31
CCR4-201ENST00000330953 NUP155O75694 1391 aa13.08□□□□□ -0.32
CCR4-201ENST00000330953 SETD1BQ9UPS6 1966 aaKnown RBP13.07□□□□□ -0.32
CCR4-201ENST00000330953 DLC1Q96QB1 1528 aa13.06□□□□□ -0.32
CCR4-201ENST00000330953 RPGRIP1LQ68CZ1 1315 aa13.05□□□□□ -0.32
CCR4-201ENST00000330953 ZNF777Q9ULD5 760 aaPredicted RBP13.05□□□□□ -0.32
CCR4-201ENST00000330953 A2ML1A8K2U0 1454 aa13.05□□□□□ -0.32
CCR4-201ENST00000330953 RRP7BPQ9NSQ0 103 aa13.04□□□□□ -0.32
CCR4-201ENST00000330953 RAPGEF3O95398 923 aa13.04□□□□□ -0.32
CCR4-201ENST00000330953 MED14O60244 1454 aa13.04□□□□□ -0.32
CCR4-201ENST00000330953 NWD1Q149M9 1564 aa13.04□□□□□ -0.32
CCR4-201ENST00000330953 CEP170BQ9Y4F5 1589 aaPredicted RBP13.04□□□□□ -0.32
CCR4-201ENST00000330953 ADGRB1O14514 1584 aa13.03□□□□□ -0.32
CCR4-201ENST00000330953 ADGRB2O60241 1585 aa13.01□□□□□ -0.33
CCR4-201ENST00000330953 XRN1Q8IZH2 1706 aaKnown RBP13.01□□□□□ -0.33
CCR4-201ENST00000330953 PIK3C2GO75747 1445 aa13□□□□□ -0.33
CCR4-201ENST00000330953 CCDC144AA2RUR9 1427 aa13□□□□□ -0.33
CCR4-201ENST00000330953 ARHGEF28Q8N1W1 1705 aaKnown RBP12.99□□□□□ -0.33
CCR4-201ENST00000330953 CPS1P31327 1500 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms