RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 PTPRGP23470 1445 aa17.62■□□□□ 0.41
FNDC1-202ENST00000329629 U2AF1L5P0DN76 240 aaPredicted RBP17.61■□□□□ 0.41
FNDC1-202ENST00000329629 U2AF1Q01081 240 aaKnown RBP eCLIP17.61■□□□□ 0.41
FNDC1-202ENST00000329629 NUTM2DQ5VT03 806 aaPredicted RBP17.61■□□□□ 0.41
FNDC1-202ENST00000329629 ZNF330Q9Y3S2 320 aaPredicted RBP17.61■□□□□ 0.41
FNDC1-202ENST00000329629 CSPP1Q1MSJ5 1256 aa17.59■□□□□ 0.41
FNDC1-202ENST00000329629 EIF3AQ14152 1382 aaKnown RBP17.59■□□□□ 0.41
FNDC1-202ENST00000329629 VSIG10Q8N0Z9 540 aa17.58■□□□□ 0.41
FNDC1-202ENST00000329629 RASSF8Q8NHQ8 419 aa17.57■□□□□ 0.4
FNDC1-202ENST00000329629 SMC4Q9NTJ3 1288 aa17.57■□□□□ 0.4
FNDC1-202ENST00000329629 CLUAP1Q96AJ1 413 aa17.56■□□□□ 0.4
FNDC1-202ENST00000329629 CHMP3Q9Y3E7 222 aa17.56■□□□□ 0.4
FNDC1-202ENST00000329629 RSPH6AQ9H0K4 717 aa17.56■□□□□ 0.4
FNDC1-202ENST00000329629 PHF14O94880 888 aa17.55■□□□□ 0.4
FNDC1-202ENST00000329629 GORABQ5T7V8 394 aa17.55■□□□□ 0.4
FNDC1-202ENST00000329629 CCDC146Q8IYE0 955 aa17.55■□□□□ 0.4
FNDC1-202ENST00000329629 ANO8Q9HCE9 1232 aaPredicted RBP17.55■□□□□ 0.4
FNDC1-202ENST00000329629 GPATCH3Q96I76 525 aa17.55■□□□□ 0.4
FNDC1-202ENST00000329629 SLC4A3P48751 1232 aa17.55■□□□□ 0.4
FNDC1-202ENST00000329629 TPM3P06753 285 aa17.54■□□□□ 0.4
FNDC1-202ENST00000329629 SETQ01105 290 aaPredicted RBP17.54■□□□□ 0.4
FNDC1-202ENST00000329629 NGDNQ8NEJ9 315 aaKnown RBP17.54■□□□□ 0.4
FNDC1-202ENST00000329629 RALBP1Q15311 655 aa17.53■□□□□ 0.4
FNDC1-202ENST00000329629 CCDC34Q96HJ3 373 aa17.53■□□□□ 0.4
FNDC1-202ENST00000329629 RAB3GAP2Q9H2M9 1393 aa17.53■□□□□ 0.4
FNDC1-202ENST00000329629 DDX11L8A8MPP1 907 aa17.52■□□□□ 0.4
FNDC1-202ENST00000329629 SLC4A10Q6U841 1118 aa17.52■□□□□ 0.4
FNDC1-202ENST00000329629 CCAR2Q8N163 923 aaKnown RBP17.52■□□□□ 0.39
FNDC1-202ENST00000329629 TERF2IPQ9NYB0 399 aa17.51■□□□□ 0.39
FNDC1-202ENST00000329629 AEBP2Q6ZN18 517 aaPredicted RBP17.5■□□□□ 0.39
FNDC1-202ENST00000329629 ST18O60284 1047 aa17.5■□□□□ 0.39
FNDC1-202ENST00000329629 STK31Q9BXU1 1019 aa17.5■□□□□ 0.39
FNDC1-202ENST00000329629 FOXD4L6Q3SYB3 417 aaPredicted RBP17.5■□□□□ 0.39
FNDC1-202ENST00000329629 FOXD4L3Q6VB84 417 aaPredicted RBP17.5■□□□□ 0.39
FNDC1-202ENST00000329629 GAPVD1Q14C86 1478 aa17.49■□□□□ 0.39
FNDC1-202ENST00000329629 PATL2C9JE40 543 aaKnown RBP17.49■□□□□ 0.39
FNDC1-202ENST00000329629 KIF16BQ96L93 1317 aa17.49■□□□□ 0.39
FNDC1-202ENST00000329629 PES1O00541 588 aaKnown RBP17.49■□□□□ 0.39
FNDC1-202ENST00000329629 ZNF771Q7L3S4 317 aaPredicted RBP17.49■□□□□ 0.39
FNDC1-202ENST00000329629 USP35Q9P2H5 1018 aa17.48■□□□□ 0.39
FNDC1-202ENST00000329629 HMMRO75330 724 aa17.48■□□□□ 0.39
FNDC1-202ENST00000329629 FAM69CQ0P6D2 419 aa17.48■□□□□ 0.39
FNDC1-202ENST00000329629 SF3A1Q15459 793 aaKnown RBP17.48■□□□□ 0.39
FNDC1-202ENST00000329629 TAF7LQ5H9L4 462 aa17.48■□□□□ 0.39
FNDC1-202ENST00000329629 GSE1Q14687 1217 aa17.48■□□□□ 0.39
FNDC1-202ENST00000329629 CENPJQ9HC77 1338 aaPredicted RBP17.47■□□□□ 0.39
FNDC1-202ENST00000329629 DDX49Q9Y6V7 483 aaKnown RBP17.46■□□□□ 0.39
FNDC1-202ENST00000329629 NUTM2FA1L443 756 aa17.46■□□□□ 0.39
FNDC1-202ENST00000329629 CEP89Q96ST8 783 aa17.46■□□□□ 0.39
FNDC1-202ENST00000329629 FGD5Q6ZNL6 1462 aa17.46■□□□□ 0.39
FNDC1-202ENST00000329629 ZNF592Q92610 1267 aa17.46■□□□□ 0.39
FNDC1-202ENST00000329629 TOMM22Q9NS69 142 aa17.45■□□□□ 0.38
FNDC1-202ENST00000329629 TPD52L1Q16890 204 aaPredicted RBP17.45■□□□□ 0.38
FNDC1-202ENST00000329629 H3BQV1 296 aa17.44■□□□□ 0.38
FNDC1-202ENST00000329629 IFFO2Q5TF58 517 aa17.44■□□□□ 0.38
FNDC1-202ENST00000329629 TMX4Q9H1E5 349 aaPredicted RBP17.44■□□□□ 0.38
FNDC1-202ENST00000329629 RAD54L2Q9Y4B4 1467 aa17.43■□□□□ 0.38
FNDC1-202ENST00000329629 AMPHP49418 695 aa17.43■□□□□ 0.38
FNDC1-202ENST00000329629 GOLGA6L19H0YKK7 550 aa17.42■□□□□ 0.38
FNDC1-202ENST00000329629 TRAK1Q9UPV9 953 aa17.42■□□□□ 0.38
FNDC1-202ENST00000329629 VPS53Q5VIR6 699 aa17.42■□□□□ 0.38
FNDC1-202ENST00000329629 PDE4AP27815 886 aa17.41■□□□□ 0.38
FNDC1-202ENST00000329629 RILPL2Q969X0 211 aa17.41■□□□□ 0.38
FNDC1-202ENST00000329629 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.4■□□□□ 0.38
FNDC1-202ENST00000329629 MARCH6O60337 910 aa17.4■□□□□ 0.38
FNDC1-202ENST00000329629 UACAQ9BZF9 1416 aa17.4■□□□□ 0.38
FNDC1-202ENST00000329629 LTV1Q96GA3 475 aaPredicted RBP17.39■□□□□ 0.37
FNDC1-202ENST00000329629 BECN2A8MW95 431 aa17.39■□□□□ 0.37
FNDC1-202ENST00000329629 FAM161AQ3B820 660 aa17.39■□□□□ 0.37
FNDC1-202ENST00000329629 CCDC144AA2RUR9 1427 aa17.39■□□□□ 0.37
FNDC1-202ENST00000329629 PLIN1O60240 522 aa17.38■□□□□ 0.37
FNDC1-202ENST00000329629 TSR1Q2NL82 804 aaKnown RBP17.38■□□□□ 0.37
FNDC1-202ENST00000329629 CHMP4AQ9BY43 222 aa17.38■□□□□ 0.37
FNDC1-202ENST00000329629 FAM13BQ9NYF5 915 aa17.38■□□□□ 0.37
FNDC1-202ENST00000329629 SKOR2Q2VWA4 1001 aaPredicted RBP17.38■□□□□ 0.37
FNDC1-202ENST00000329629 VGFO15240 615 aaPredicted RBP17.38■□□□□ 0.37
FNDC1-202ENST00000329629 GPS2Q13227 327 aa17.38■□□□□ 0.37
FNDC1-202ENST00000329629 FAM184AQ8NB25 1140 aa17.38■□□□□ 0.37
FNDC1-202ENST00000329629 L3MBTL2Q969R5 705 aa17.37■□□□□ 0.37
FNDC1-202ENST00000329629 RRP7AQ9Y3A4 280 aaKnown RBP17.37■□□□□ 0.37
FNDC1-202ENST00000329629 AQRO60306 1485 aaKnown RBP eCLIP17.37■□□□□ 0.37
FNDC1-202ENST00000329629 KIF3AQ9Y496 699 aa17.37■□□□□ 0.37
FNDC1-202ENST00000329629 ANKRD45Q5TZF3 282 aa17.36■□□□□ 0.37
FNDC1-202ENST00000329629 CENPQQ7L2Z9 268 aaPredicted RBP17.36■□□□□ 0.37
FNDC1-202ENST00000329629 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.35■□□□□ 0.37
FNDC1-202ENST00000329629 WWC1Q8IX03 1113 aa17.34■□□□□ 0.37
FNDC1-202ENST00000329629 NCAPD3P42695 1498 aa17.34■□□□□ 0.37
FNDC1-202ENST00000329629 BCL2L13Q9BXK5 485 aa17.34■□□□□ 0.37
FNDC1-202ENST00000329629 CCDC70Q6NSX1 233 aa17.34■□□□□ 0.37
FNDC1-202ENST00000329629 FBXO3Q9UK99 471 aa17.34■□□□□ 0.37
FNDC1-202ENST00000329629 RUSC2Q8N2Y8 1516 aa17.34■□□□□ 0.37
FNDC1-202ENST00000329629 MCTP1Q6DN14 999 aa17.34■□□□□ 0.37
FNDC1-202ENST00000329629 PDE3BQ13370 1112 aa17.34■□□□□ 0.37
FNDC1-202ENST00000329629 EXOC6Q8TAG9 804 aa17.34■□□□□ 0.37
FNDC1-202ENST00000329629 EVA1CP58658 441 aa17.33■□□□□ 0.36
FNDC1-202ENST00000329629 TPM1P09493 284 aa17.33■□□□□ 0.36
FNDC1-202ENST00000329629 HDAC5Q9UQL6 1122 aa17.33■□□□□ 0.36
FNDC1-202ENST00000329629 PRDM2Q13029 1718 aa17.32■□□□□ 0.36
FNDC1-202ENST00000329629 TPM2P07951 284 aa17.32■□□□□ 0.36
FNDC1-202ENST00000329629 CRBNQ96SW2 442 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms