RNA–Protein interactions for RNA: ENST00000328354.10

CHEK2-201, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,867 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-201ENST00000328354 NEO1Q92859 1461 aa20.32■□□□□ 0.84
CHEK2-201ENST00000328354 EIF2AK4Q9P2K8 1649 aaKnown RBP20.32■□□□□ 0.84
CHEK2-201ENST00000328354 TSPOAP1O95153 1857 aa20.3■□□□□ 0.84
CHEK2-201ENST00000328354 POGZQ7Z3K3 1410 aa20.3■□□□□ 0.84
CHEK2-201ENST00000328354 ATP10AO60312 1499 aa20.27■□□□□ 0.83
CHEK2-201ENST00000328354 DHX29Q7Z478 1369 aaKnown RBP20.26■□□□□ 0.83
CHEK2-201ENST00000328354 MLH3Q9UHC1 1453 aa20.26■□□□□ 0.83
CHEK2-201ENST00000328354 VWDEQ8N2E2 1590 aa20.25■□□□□ 0.83
CHEK2-201ENST00000328354 PLA2R1Q13018 1463 aa20.24■□□□□ 0.83
CHEK2-201ENST00000328354 HECW2Q9P2P5 1572 aa20.24■□□□□ 0.83
CHEK2-201ENST00000328354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.24■□□□□ 0.832e-6■□□□□ 8.5
CHEK2-201ENST00000328354 MIER1Q8N108 512 aa20.23■□□□□ 0.83
CHEK2-201ENST00000328354 NBPF8Q3BBV2 869 aa20.22■□□□□ 0.83
CHEK2-201ENST00000328354 PRDM15P57071 1507 aaPredicted RBP20.22■□□□□ 0.83
CHEK2-201ENST00000328354 MROH1Q8NDA8 1641 aa20.22■□□□□ 0.83
CHEK2-201ENST00000328354 TET3O43151 1660 aa20.21■□□□□ 0.83
CHEK2-201ENST00000328354 UHRF1BP1Q6BDS2 1440 aa20.21■□□□□ 0.83
CHEK2-201ENST00000328354 E9PCH4 1651 aa20.21■□□□□ 0.83
CHEK2-201ENST00000328354 CCDC144AA2RUR9 1427 aa20.2■□□□□ 0.82
CHEK2-201ENST00000328354 PPRC1Q5VV67 1664 aaKnown RBP20.2■□□□□ 0.82
CHEK2-201ENST00000328354 RICTORQ6R327 1708 aa20.19■□□□□ 0.82
CHEK2-201ENST00000328354 BCORL1Q5H9F3 1711 aa20.19■□□□□ 0.82
CHEK2-201ENST00000328354 A2MP01023 1474 aa20.18■□□□□ 0.82
CHEK2-201ENST00000328354 RNF17Q9BXT8 1623 aaKnown RBP20.18■□□□□ 0.82
CHEK2-201ENST00000328354 ABCA6Q8N139 1617 aa20.16■□□□□ 0.82
CHEK2-201ENST00000328354 KANK1Q14678 1352 aa20.16■□□□□ 0.82
CHEK2-201ENST00000328354 FRMPD1Q5SYB0 1578 aa20.16■□□□□ 0.82
CHEK2-201ENST00000328354 MYT1LQ9UL68 1186 aa20.16■□□□□ 0.82
CHEK2-201ENST00000328354 EIF4G2P78344 907 aaKnown RBP eCLIP20.15■□□□□ 0.82
CHEK2-201ENST00000328354 HIRIP3Q9BW71 556 aaPredicted RBP20.15■□□□□ 0.82
CHEK2-201ENST00000328354 SPHKAPQ2M3C7 1700 aa20.14■□□□□ 0.82
CHEK2-201ENST00000328354 HSPA5P11021 654 aaKnown RBP20.14■□□□□ 0.81
CHEK2-201ENST00000328354 KIF3BO15066 747 aa20.13■□□□□ 0.81
CHEK2-201ENST00000328354 TRPM2O94759 1503 aa20.13■□□□□ 0.81
CHEK2-201ENST00000328354 PTPRTO14522 1441 aa20.13■□□□□ 0.81
CHEK2-201ENST00000328354 SPATA31E1Q6ZUB1 1445 aa20.13■□□□□ 0.81
CHEK2-201ENST00000328354 LMTK2Q8IWU2 1503 aa20.13■□□□□ 0.81
CHEK2-201ENST00000328354 RALGAPBQ86X10 1494 aa20.12■□□□□ 0.81
CHEK2-201ENST00000328354 DIP2CQ9Y2E4 1556 aa20.1■□□□□ 0.81
CHEK2-201ENST00000328354 POLR1AO95602 1720 aaPredicted RBP20.09■□□□□ 0.81
CHEK2-201ENST00000328354 EFCAB6Q5THR3 1501 aa20.09■□□□□ 0.81
CHEK2-201ENST00000328354 CEP152O94986 1710 aa20.08■□□□□ 0.81
CHEK2-201ENST00000328354 RAPGEF3O95398 923 aa20.08■□□□□ 0.81
CHEK2-201ENST00000328354 DDX10Q13206 875 aaKnown RBP20.08■□□□□ 0.81
CHEK2-201ENST00000328354 ZMYM4Q5VZL5 1548 aa20.08■□□□□ 0.81
CHEK2-201ENST00000328354 DCAF11Q8TEB1 546 aa20.05■□□□□ 0.8
CHEK2-201ENST00000328354 NEURL4Q96JN8 1562 aa20.05■□□□□ 0.8
CHEK2-201ENST00000328354 CLTCL1P53675 1640 aa20.05■□□□□ 0.8
CHEK2-201ENST00000328354 PRAG1Q86YV5 1406 aa20.04■□□□□ 0.8
CHEK2-201ENST00000328354 TRPM1Q7Z4N2 1603 aa20.04■□□□□ 0.8
CHEK2-201ENST00000328354 COL17A1Q9UMD9 1497 aaPredicted RBP20.02■□□□□ 0.8
CHEK2-201ENST00000328354 WASHC2AQ641Q2 1341 aa20.02■□□□□ 0.79
CHEK2-201ENST00000328354 ZNF326Q5BKZ1 582 aaKnown RBP20.01■□□□□ 0.79
CHEK2-201ENST00000328354 USP47Q96K76 1375 aa20.01■□□□□ 0.79
CHEK2-201ENST00000328354 KDM2AQ9Y2K7 1162 aa20■□□□□ 0.79
CHEK2-201ENST00000328354 LAMC1P11047 1609 aa20■□□□□ 0.79
CHEK2-201ENST00000328354 YEATS2Q9ULM3 1422 aa19.99■□□□□ 0.79
CHEK2-201ENST00000328354 RGL3Q3MIN7 710 aa19.98■□□□□ 0.79
CHEK2-201ENST00000328354 ABCC3O15438 1527 aa19.98■□□□□ 0.79
CHEK2-201ENST00000328354 CCDC7Q96M83 1385 aa19.98■□□□□ 0.79
CHEK2-201ENST00000328354 ZC3H13Q5T200 1668 aaKnown RBP19.96■□□□□ 0.79
CHEK2-201ENST00000328354 GPRASP1Q5JY77 1395 aa19.96■□□□□ 0.79
CHEK2-201ENST00000328354 KIF1BO60333 1816 aa19.96■□□□□ 0.79
CHEK2-201ENST00000328354 REREQ9P2R6 1566 aa19.95■□□□□ 0.78
CHEK2-201ENST00000328354 STAC3Q96MF2 364 aa19.95■□□□□ 0.78
CHEK2-201ENST00000328354 CAMSAP1Q5T5Y3 1602 aa19.95■□□□□ 0.78
CHEK2-201ENST00000328354 CARD11Q9BXL7 1154 aa19.94■□□□□ 0.78
CHEK2-201ENST00000328354 NPATQ14207 1427 aa19.94■□□□□ 0.78
CHEK2-201ENST00000328354 C11orf95C9JLR9 678 aaPredicted RBP19.94■□□□□ 0.78
CHEK2-201ENST00000328354 MADDQ8WXG6 1647 aa19.93■□□□□ 0.78
CHEK2-201ENST00000328354 ROCK2O75116 1388 aaKnown RBP19.93■□□□□ 0.78
CHEK2-201ENST00000328354 GGT6Q6P531 493 aa19.92■□□□□ 0.78
CHEK2-201ENST00000328354 CENPBP07199 599 aaPredicted RBP19.91■□□□□ 0.78
CHEK2-201ENST00000328354 CNTLNQ9NXG0 1405 aa19.91■□□□□ 0.78
CHEK2-201ENST00000328354 UGGT1Q9NYU2 1555 aa19.9■□□□□ 0.78
CHEK2-201ENST00000328354 KIF7Q2M1P5 1343 aa19.9■□□□□ 0.78
CHEK2-201ENST00000328354 ARID4BQ4LE39 1312 aaPredicted RBP19.9■□□□□ 0.78
CHEK2-201ENST00000328354 ARHGAP31Q2M1Z3 1444 aa19.9■□□□□ 0.78
CHEK2-201ENST00000328354 CFAP65Q6ZU64 1925 aaKnown RBP19.89■□□□□ 0.78
CHEK2-201ENST00000328354 IFT172Q9UG01 1749 aa19.89■□□□□ 0.78
CHEK2-201ENST00000328354 AGLP35573 1532 aa19.89■□□□□ 0.77
CHEK2-201ENST00000328354 WASHC2CQ9Y4E1 1318 aa19.89■□□□□ 0.77
CHEK2-201ENST00000328354 ANP32CO43423 234 aa19.88■□□□□ 0.77
CHEK2-201ENST00000328354 SIGLEC1Q9BZZ2 1709 aa19.87■□□□□ 0.77
CHEK2-201ENST00000328354 MROH2AA6NES4 1674 aa19.87■□□□□ 0.77
CHEK2-201ENST00000328354 KIAA1210Q9ULL0 1709 aa19.87■□□□□ 0.77
CHEK2-201ENST00000328354 NOS1P29475 1434 aa19.86■□□□□ 0.77
CHEK2-201ENST00000328354 ADGRB3O60242 1522 aa19.86■□□□□ 0.77
CHEK2-201ENST00000328354 MYOM2P54296 1465 aa19.86■□□□□ 0.77
CHEK2-201ENST00000328354 CCER2I3L3R5 266 aa19.85■□□□□ 0.77
CHEK2-201ENST00000328354 PIK3C2BO00750 1634 aa19.85■□□□□ 0.77
CHEK2-201ENST00000328354 NBPF1Q3BBV0 1214 aa19.84■□□□□ 0.77
CHEK2-201ENST00000328354 ARHGEF40Q8TER5 1519 aa19.84■□□□□ 0.77
CHEK2-201ENST00000328354 YTHDC1Q96MU7 727 aaKnown RBP19.84■□□□□ 0.77
CHEK2-201ENST00000328354 ST20-MTHFSA0A0A6YYL1 179 aa19.82■□□□□ 0.76
CHEK2-201ENST00000328354 SYNMO15061 1565 aa19.82■□□□□ 0.76
CHEK2-201ENST00000328354 IQGAP1P46940 1657 aa19.81■□□□□ 0.76
CHEK2-201ENST00000328354 NRXN1Q9ULB1 1477 aa19.8■□□□□ 0.76
CHEK2-201ENST00000328354 PPLO60437 1756 aa19.79■□□□□ 0.76
CHEK2-201ENST00000328354 PPP6R1Q9UPN7 881 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 275.3 ms