RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 MAP3K1Q13233 1512 aa17.67■□□□□ 0.42
DNMT3B-202ENST00000328111 AFAP1Q8N556 730 aa17.67■□□□□ 0.42
DNMT3B-202ENST00000328111 MRC2Q9UBG0 1479 aa17.67■□□□□ 0.42
DNMT3B-202ENST00000328111 EPRSP07814 1512 aaKnown RBP17.67■□□□□ 0.42
DNMT3B-202ENST00000328111 HDGFL2Q7Z4V5 671 aaPredicted RBP17.67■□□□□ 0.42
DNMT3B-202ENST00000328111 TROQ12816 1431 aaPredicted RBP17.67■□□□□ 0.42
DNMT3B-202ENST00000328111 APAF1O14727 1248 aa17.66■□□□□ 0.42
DNMT3B-202ENST00000328111 C11orf95C9JLR9 678 aaPredicted RBP17.65■□□□□ 0.42
DNMT3B-202ENST00000328111 DAPK1P53355 1430 aa17.64■□□□□ 0.41
DNMT3B-202ENST00000328111 CRBNQ96SW2 442 aa17.64■□□□□ 0.41
DNMT3B-202ENST00000328111 KIAA1107Q9UPP5 1409 aa17.64■□□□□ 0.41
DNMT3B-202ENST00000328111 RTN4Q9NQC3 1192 aaKnown RBP17.63■□□□□ 0.41
DNMT3B-202ENST00000328111 SNAPC4Q5SXM2 1469 aa17.63■□□□□ 0.41
DNMT3B-202ENST00000328111 IFT140Q96RY7 1462 aa17.63■□□□□ 0.41
DNMT3B-202ENST00000328111 CENPJQ9HC77 1338 aaPredicted RBP17.62■□□□□ 0.41
DNMT3B-202ENST00000328111 SUPT6HQ7KZ85 1726 aaKnown RBP17.62■□□□□ 0.41
DNMT3B-202ENST00000328111 BCL2L13Q9BXK5 485 aa17.61■□□□□ 0.41
DNMT3B-202ENST00000328111 PDE4AP27815 886 aa17.61■□□□□ 0.41
DNMT3B-202ENST00000328111 SPRYD3Q8NCJ5 442 aa17.61■□□□□ 0.41
DNMT3B-202ENST00000328111 C9orf84Q5VXU9 1444 aa17.61■□□□□ 0.41
DNMT3B-202ENST00000328111 HECW1Q76N89 1606 aa17.6■□□□□ 0.41
DNMT3B-202ENST00000328111 ITPRIPQ8IWB1 547 aa17.59■□□□□ 0.41
DNMT3B-202ENST00000328111 CDCA7LQ96GN5 454 aa17.59■□□□□ 0.41
DNMT3B-202ENST00000328111 TERF2IPQ9NYB0 399 aa17.59■□□□□ 0.41
DNMT3B-202ENST00000328111 SMC4Q9NTJ3 1288 aa17.59■□□□□ 0.41
DNMT3B-202ENST00000328111 LMOD2Q6P5Q4 547 aa17.58■□□□□ 0.41
DNMT3B-202ENST00000328111 CHMP4BQ9H444 224 aaKnown RBP17.58■□□□□ 0.41
DNMT3B-202ENST00000328111 URB2Q14146 1524 aaKnown RBP17.58■□□□□ 0.4
DNMT3B-202ENST00000328111 KIAA0586Q9BVV6 1533 aa17.58■□□□□ 0.4
DNMT3B-202ENST00000328111 RWDD1Q9H446 243 aaPredicted RBP17.58■□□□□ 0.4
DNMT3B-202ENST00000328111 FANCIQ9NVI1 1328 aa17.58■□□□□ 0.4
DNMT3B-202ENST00000328111 PNISRQ8TF01 805 aaKnown RBP17.57■□□□□ 0.4
DNMT3B-202ENST00000328111 SYNJ2O15056 1496 aa17.57■□□□□ 0.4
DNMT3B-202ENST00000328111 IPO8O15397 1037 aaKnown RBP17.57■□□□□ 0.4
DNMT3B-202ENST00000328111 HDGFP51858 240 aaKnown RBP17.57■□□□□ 0.4
DNMT3B-202ENST00000328111 ADAMTS8Q9UP79 889 aa17.57■□□□□ 0.4
DNMT3B-202ENST00000328111 ANKRD30BQ9BXX2 1392 aa17.56■□□□□ 0.4
DNMT3B-202ENST00000328111 SLKQ9H2G2 1235 aaPredicted RBP17.56■□□□□ 0.4
DNMT3B-202ENST00000328111 BRD4O60885 1362 aaPredicted RBP17.56■□□□□ 0.4
DNMT3B-202ENST00000328111 GOLGA6L22H0YM25 854 aa17.56■□□□□ 0.4
DNMT3B-202ENST00000328111 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.55■□□□□ 0.4
DNMT3B-202ENST00000328111 NCLP19338 710 aaKnown RBP17.55■□□□□ 0.4
DNMT3B-202ENST00000328111 IQGAP2Q13576 1575 aa17.55■□□□□ 0.4
DNMT3B-202ENST00000328111 VGFO15240 615 aaPredicted RBP17.54■□□□□ 0.4
DNMT3B-202ENST00000328111 CFAP70Q5T0N1 1121 aa17.54■□□□□ 0.4
DNMT3B-202ENST00000328111 ROCK1Q13464 1354 aa17.54■□□□□ 0.4
DNMT3B-202ENST00000328111 PTPRKQ15262 1439 aa17.54■□□□□ 0.4
DNMT3B-202ENST00000328111 E9PSI1 815 aa17.54■□□□□ 0.4
DNMT3B-202ENST00000328111 LAMC3Q9Y6N6 1575 aa17.54■□□□□ 0.4
DNMT3B-202ENST00000328111 COG6Q9Y2V7 657 aa17.53■□□□□ 0.4
DNMT3B-202ENST00000328111 CUL7Q14999 1698 aa17.53■□□□□ 0.4
DNMT3B-202ENST00000328111 ABCC5O15440 1437 aa17.53■□□□□ 0.4
DNMT3B-202ENST00000328111 ARHGAP5Q13017 1502 aa17.53■□□□□ 0.4
DNMT3B-202ENST00000328111 HSP90AB1P08238 724 aaKnown RBP17.53■□□□□ 0.4
DNMT3B-202ENST00000328111 CASC1Q6TDU7 716 aa17.53■□□□□ 0.4
DNMT3B-202ENST00000328111 APBB1O00213 710 aa17.52■□□□□ 0.4
DNMT3B-202ENST00000328111 CENPQQ7L2Z9 268 aaPredicted RBP17.52■□□□□ 0.4
DNMT3B-202ENST00000328111 PMFBP1Q8TBY8 1022 aa17.52■□□□□ 0.4
DNMT3B-202ENST00000328111 AKNAQ7Z591 1439 aa17.52■□□□□ 0.4
DNMT3B-202ENST00000328111 PTPN23Q9H3S7 1636 aa17.52■□□□□ 0.4
DNMT3B-202ENST00000328111 CGNL1Q0VF96 1302 aa17.52■□□□□ 0.39
DNMT3B-202ENST00000328111 PLB1Q6P1J6 1458 aa17.52■□□□□ 0.39
DNMT3B-202ENST00000328111 MAPKBP1O60336 1514 aa17.51■□□□□ 0.39
DNMT3B-202ENST00000328111 SLC4A3P48751 1232 aa17.51■□□□□ 0.39
DNMT3B-202ENST00000328111 TMEM132EQ6IEE7 984 aa17.51■□□□□ 0.39
DNMT3B-202ENST00000328111 MINK1Q8N4C8 1332 aaPredicted RBP17.51■□□□□ 0.39
DNMT3B-202ENST00000328111 NUTM2FA1L443 756 aa17.51■□□□□ 0.39
DNMT3B-202ENST00000328111 HSCBQ8IWL3 235 aa17.5■□□□□ 0.39
DNMT3B-202ENST00000328111 EVC2Q86UK5 1308 aa17.5■□□□□ 0.39
DNMT3B-202ENST00000328111 STAC3Q96MF2 364 aa17.49■□□□□ 0.39
DNMT3B-202ENST00000328111 TRIM44Q96DX7 344 aaPredicted RBP17.48■□□□□ 0.39
DNMT3B-202ENST00000328111 CYB5RLQ6IPT4 315 aa17.48■□□□□ 0.39
DNMT3B-202ENST00000328111 ELL2O00472 640 aaPredicted RBP17.47■□□□□ 0.39
DNMT3B-202ENST00000328111 RTF1Q92541 710 aaKnown RBP17.46■□□□□ 0.39
DNMT3B-202ENST00000328111 MFAP1P55081 439 aaKnown RBP17.46■□□□□ 0.39
DNMT3B-202ENST00000328111 CALD1Q05682 793 aaKnown RBP17.46■□□□□ 0.39
DNMT3B-202ENST00000328111 OSCARQ8IYS5 282 aa17.46■□□□□ 0.39
DNMT3B-202ENST00000328111 PPP2R1AP30153 589 aa17.46■□□□□ 0.39
DNMT3B-202ENST00000328111 FAM161AQ3B820 660 aa17.46■□□□□ 0.39
DNMT3B-202ENST00000328111 TPRNQ4KMQ1 711 aa17.46■□□□□ 0.39
DNMT3B-202ENST00000328111 ZNF608Q9ULD9 1512 aaPredicted RBP17.46■□□□□ 0.38
DNMT3B-202ENST00000328111 ARHGEF11O15085 1522 aa17.45■□□□□ 0.38
DNMT3B-202ENST00000328111 NCOA1Q15788 1441 aa17.45■□□□□ 0.38
DNMT3B-202ENST00000328111 HAP1P54257 671 aaPredicted RBP17.44■□□□□ 0.38
DNMT3B-202ENST00000328111 A0A0G2JS52 829 aa17.43■□□□□ 0.38
DNMT3B-202ENST00000328111 CAMSAP2Q08AD1 1489 aa17.42■□□□□ 0.38
DNMT3B-202ENST00000328111 PAK3O75914 559 aaPredicted RBP17.41■□□□□ 0.38
DNMT3B-202ENST00000328111 GRIN2AQ12879 1464 aa17.4■□□□□ 0.38
DNMT3B-202ENST00000328111 ZKSCAN2Q63HK3 967 aa17.4■□□□□ 0.38
DNMT3B-202ENST00000328111 OS9Q13438 667 aaPredicted RBP17.4■□□□□ 0.38
DNMT3B-202ENST00000328111 MTHFSP49914 203 aa17.4■□□□□ 0.38
DNMT3B-202ENST00000328111 RPRD2Q5VT52 1461 aaKnown RBP17.39■□□□□ 0.38
DNMT3B-202ENST00000328111 GGNBP2Q9H3C7 697 aa17.39■□□□□ 0.37
DNMT3B-202ENST00000328111 MAGI1Q96QZ7 1491 aaPredicted RBP17.39■□□□□ 0.37
DNMT3B-202ENST00000328111 RUNDC1Q96C34 613 aa17.39■□□□□ 0.37
DNMT3B-202ENST00000328111 GZF1Q9H116 711 aaPredicted RBP17.39■□□□□ 0.37
DNMT3B-202ENST00000328111 CABP2Q9NPB3 220 aa17.39■□□□□ 0.37
DNMT3B-202ENST00000328111 SCAPERQ9BY12 1400 aa17.39■□□□□ 0.37
DNMT3B-202ENST00000328111 TRHP20396 242 aaPredicted RBP17.39■□□□□ 0.37
DNMT3B-202ENST00000328111 NGEFQ8N5V2 710 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms