RNA–Protein interactions for RNA: ENST00000327047.5

CLRN1-202, Transcript of clarin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN1, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-202ENST00000327047 ERICH6BQ5W0A0 696 aa10.06□□□□□ -0.8
CLRN1-202ENST00000327047 CFAP44Q96MT7 982 aa10.06□□□□□ -0.8
CLRN1-202ENST00000327047 CD109Q6YHK3 1445 aa10.05□□□□□ -0.8
CLRN1-202ENST00000327047 RTL5Q5HYW3 569 aaPredicted RBP10.05□□□□□ -0.8
CLRN1-202ENST00000327047 IL27Q8NEV9 243 aa10.05□□□□□ -0.8
CLRN1-202ENST00000327047 MYOM3Q5VTT5 1437 aa10.04□□□□□ -0.8
CLRN1-202ENST00000327047 CARMIL2Q6F5E8 1435 aa10.03□□□□□ -0.8
CLRN1-202ENST00000327047 EHBP1L1Q8N3D4 1523 aa10.03□□□□□ -0.8
CLRN1-202ENST00000327047 CNKSR2Q8WXI2 1034 aa10.03□□□□□ -0.8
CLRN1-202ENST00000327047 CCDC18Q5T9S5 1454 aa10.03□□□□□ -0.8
CLRN1-202ENST00000327047 FRMPD1Q5SYB0 1578 aa10.03□□□□□ -0.8
CLRN1-202ENST00000327047 PKD2Q13563 968 aa10.02□□□□□ -0.81
CLRN1-202ENST00000327047 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.02□□□□□ -0.81
CLRN1-202ENST00000327047 TONSLQ96HA7 1378 aa10.02□□□□□ -0.81
CLRN1-202ENST00000327047 NEO1Q92859 1461 aa10.01□□□□□ -0.81
CLRN1-202ENST00000327047 CDK13Q14004 1512 aaKnown RBP10.01□□□□□ -0.81
CLRN1-202ENST00000327047 KIAA0556O60303 1618 aa10.01□□□□□ -0.81
CLRN1-202ENST00000327047 CCDC184Q52MB2 194 aa10.01□□□□□ -0.81
CLRN1-202ENST00000327047 HECW1Q76N89 1606 aa10.01□□□□□ -0.81
CLRN1-202ENST00000327047 FAM9BQ8IZU0 186 aa10.01□□□□□ -0.81
CLRN1-202ENST00000327047 SUPT6HQ7KZ85 1726 aaKnown RBP10□□□□□ -0.81
CLRN1-202ENST00000327047 ANP32AP39687 249 aaKnown RBP10□□□□□ -0.81
CLRN1-202ENST00000327047 UHRF1BP1Q6BDS2 1440 aa10□□□□□ -0.81
CLRN1-202ENST00000327047 IPO9Q96P70 1041 aaKnown RBP10□□□□□ -0.81
CLRN1-202ENST00000327047 ZBTB47Q9UFB7 747 aaPredicted RBP10□□□□□ -0.81
CLRN1-202ENST00000327047 NUP153P49790 1475 aaKnown RBP9.99□□□□□ -0.81
CLRN1-202ENST00000327047 TCOF1Q13428 1488 aaKnown RBP9.99□□□□□ -0.81
CLRN1-202ENST00000327047 HFM1A2PYH4 1435 aa9.99□□□□□ -0.81
CLRN1-202ENST00000327047 NAIPQ13075 1403 aa9.99□□□□□ -0.81
CLRN1-202ENST00000327047 ARHGEF12Q9NZN5 1544 aa9.98□□□□□ -0.81
CLRN1-202ENST00000327047 UBAP1LF5GYI3 381 aa9.98□□□□□ -0.81
CLRN1-202ENST00000327047 ZMYM4Q5VZL5 1548 aa9.98□□□□□ -0.81
CLRN1-202ENST00000327047 ARID3CA6NKF2 412 aa9.97□□□□□ -0.81
CLRN1-202ENST00000327047 PTPN23Q9H3S7 1636 aa9.97□□□□□ -0.81
CLRN1-202ENST00000327047 SLC4A2P04920 1241 aa9.97□□□□□ -0.81
CLRN1-202ENST00000327047 NPM2Q86SE8 214 aaKnown RBP9.96□□□□□ -0.81
CLRN1-202ENST00000327047 NCOA1Q15788 1441 aa9.96□□□□□ -0.81
CLRN1-202ENST00000327047 WASHC2AQ641Q2 1341 aa9.95□□□□□ -0.82
CLRN1-202ENST00000327047 ABCA9Q8IUA7 1624 aa9.95□□□□□ -0.82
CLRN1-202ENST00000327047 RICTORQ6R327 1708 aa9.95□□□□□ -0.82
CLRN1-202ENST00000327047 MIA2Q96PC5 1412 aa9.95□□□□□ -0.82
CLRN1-202ENST00000327047 AKNAQ7Z591 1439 aa9.94□□□□□ -0.82
CLRN1-202ENST00000327047 CFAP74Q9C0B2 1584 aa9.94□□□□□ -0.82
CLRN1-202ENST00000327047 CPS1P31327 1500 aa9.94□□□□□ -0.82
CLRN1-202ENST00000327047 MRS2Q9HD23 443 aa9.94□□□□□ -0.82
CLRN1-202ENST00000327047 RAPGEF6Q8TEU7 1601 aa9.94□□□□□ -0.82
CLRN1-202ENST00000327047 IFFO2Q5TF58 517 aa9.93□□□□□ -0.82
CLRN1-202ENST00000327047 ZBED9Q6R2W3 1325 aa9.93□□□□□ -0.82
CLRN1-202ENST00000327047 HSPA5P11021 654 aaKnown RBP9.93□□□□□ -0.82
CLRN1-202ENST00000327047 MAGI2Q86UL8 1455 aa9.93□□□□□ -0.82
CLRN1-202ENST00000327047 HSPA1LP34931 641 aa9.92□□□□□ -0.82
CLRN1-202ENST00000327047 LAS1LQ9Y4W2 734 aaKnown RBP9.92□□□□□ -0.82
CLRN1-202ENST00000327047 DENND4BO75064 1496 aaPredicted RBP9.92□□□□□ -0.82
CLRN1-202ENST00000327047 IFNLR1Q8IU57 520 aaPredicted RBP9.9□□□□□ -0.82
CLRN1-202ENST00000327047 RRP7BPQ9NSQ0 103 aa9.9□□□□□ -0.82
CLRN1-202ENST00000327047 ZNF644Q9H582 1327 aaPredicted RBP9.9□□□□□ -0.82
CLRN1-202ENST00000327047 NEFMP07197 916 aa9.9□□□□□ -0.82
CLRN1-202ENST00000327047 PRKRIP1Q9H875 184 aaPredicted RBP9.9□□□□□ -0.82
CLRN1-202ENST00000327047 CHIC2Q9UKJ5 165 aa9.9□□□□□ -0.82
CLRN1-202ENST00000327047 ARID4BQ4LE39 1312 aaPredicted RBP9.9□□□□□ -0.82
CLRN1-202ENST00000327047 TROQ12816 1431 aaPredicted RBP9.89□□□□□ -0.83
CLRN1-202ENST00000327047 SENP3-EIF4A1A0A087X0R7 540 aa9.89□□□□□ -0.83
CLRN1-202ENST00000327047 SETD1AO15047 1707 aaKnown RBP9.89□□□□□ -0.83
CLRN1-202ENST00000327047 ABCC5O15440 1437 aa9.89□□□□□ -0.83
CLRN1-202ENST00000327047 ZFYVE16Q7Z3T8 1539 aa9.88□□□□□ -0.83
CLRN1-202ENST00000327047 ABCA8O94911 1581 aa9.88□□□□□ -0.83
CLRN1-202ENST00000327047 CNGB1Q14028 1251 aaPredicted RBP9.88□□□□□ -0.83
CLRN1-202ENST00000327047 UBE2Q2Q8WVN8 375 aa9.88□□□□□ -0.83
CLRN1-202ENST00000327047 CNTLNQ9NXG0 1405 aa9.87□□□□□ -0.83
CLRN1-202ENST00000327047 EIF4G2P78344 907 aaKnown RBP eCLIP9.87□□□□□ -0.83
CLRN1-202ENST00000327047 DAPK1P53355 1430 aa9.87□□□□□ -0.83
CLRN1-202ENST00000327047 PLA2R1Q13018 1463 aa9.87□□□□□ -0.83
CLRN1-202ENST00000327047 GPATCH8Q9UKJ3 1502 aaKnown RBP9.87□□□□□ -0.83
CLRN1-202ENST00000327047 ZNF142P52746 1687 aaPredicted RBP9.86□□□□□ -0.83
CLRN1-202ENST00000327047 SIGLEC1Q9BZZ2 1709 aa9.86□□□□□ -0.83
CLRN1-202ENST00000327047 C11orf95C9JLR9 678 aaPredicted RBP9.86□□□□□ -0.83
CLRN1-202ENST00000327047 TOM1O60784 492 aa9.86□□□□□ -0.83
CLRN1-202ENST00000327047 EIF5BO60841 1220 aaKnown RBP9.86□□□□□ -0.83
CLRN1-202ENST00000327047 ATP10BO94823 1461 aa9.86□□□□□ -0.83
CLRN1-202ENST00000327047 ROCK1Q13464 1354 aa9.86□□□□□ -0.83
CLRN1-202ENST00000327047 GCC2Q8IWJ2 1684 aa9.86□□□□□ -0.83
CLRN1-202ENST00000327047 BRPF3Q9ULD4 1205 aa9.85□□□□□ -0.83
CLRN1-202ENST00000327047 KIF14Q15058 1648 aa9.84□□□□□ -0.83
CLRN1-202ENST00000327047 C3P01024 1663 aa9.84□□□□□ -0.83
CLRN1-202ENST00000327047 DNMT1P26358 1616 aaKnown RBP9.84□□□□□ -0.83
CLRN1-202ENST00000327047 RGS17Q9UGC6 210 aaPredicted RBP9.83□□□□□ -0.84
CLRN1-202ENST00000327047 NUDCQ9Y266 331 aa9.83□□□□□ -0.84
CLRN1-202ENST00000327047 ATF5Q9Y2D1 282 aaPredicted RBP9.83□□□□□ -0.84
CLRN1-202ENST00000327047 MPHOSPH9Q99550 1183 aa9.82□□□□□ -0.84
CLRN1-202ENST00000327047 USP35Q9P2H5 1018 aa9.82□□□□□ -0.84
CLRN1-202ENST00000327047 SMG6Q86US8 1419 aaKnown RBP9.82□□□□□ -0.84
CLRN1-202ENST00000327047 WASHC2CQ9Y4E1 1318 aa9.82□□□□□ -0.84
CLRN1-202ENST00000327047 CFDP1Q9UEE9 299 aaPredicted RBP9.81□□□□□ -0.84
CLRN1-202ENST00000327047 CCDC7Q96M83 1385 aa9.81□□□□□ -0.84
CLRN1-202ENST00000327047 CAMSAP1Q5T5Y3 1602 aa9.81□□□□□ -0.84
CLRN1-202ENST00000327047 BBXQ8WY36 941 aaPredicted RBP9.81□□□□□ -0.84
CLRN1-202ENST00000327047 CAMSAP2Q08AD1 1489 aa9.81□□□□□ -0.84
CLRN1-202ENST00000327047 REREQ9P2R6 1566 aa9.8□□□□□ -0.84
CLRN1-202ENST00000327047 MROH2AA6NES4 1674 aa9.8□□□□□ -0.84
CLRN1-202ENST00000327047 ALKQ9UM73 1620 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms