RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 RCAN3Q9UKA8 241 aa17.56■□□□□ 0.4
CLGN-201ENST00000325617 MAGI1Q96QZ7 1491 aaPredicted RBP17.56■□□□□ 0.4
CLGN-201ENST00000325617 RRP1P56182 461 aaKnown RBP17.56■□□□□ 0.4
CLGN-201ENST00000325617 PANK3Q9H999 370 aa17.56■□□□□ 0.4
CLGN-201ENST00000325617 ADGRL2O95490 1459 aa17.55■□□□□ 0.4
CLGN-201ENST00000325617 ITSN2Q9NZM3 1697 aa17.55■□□□□ 0.4
CLGN-201ENST00000325617 RNF123Q5XPI4 1314 aa17.55■□□□□ 0.4
CLGN-201ENST00000325617 RALGAPBQ86X10 1494 aa17.54■□□□□ 0.4
CLGN-201ENST00000325617 SYNJ2O15056 1496 aa17.54■□□□□ 0.4
CLGN-201ENST00000325617 DISP3Q9P2K9 1392 aa17.53■□□□□ 0.4
CLGN-201ENST00000325617 CROCC2H7BZ55 1655 aa17.51■□□□□ 0.39
CLGN-201ENST00000325617 ABCC10Q5T3U5 1492 aa17.51■□□□□ 0.39
CLGN-201ENST00000325617 ANP32AP39687 249 aaKnown RBP17.51■□□□□ 0.39
CLGN-201ENST00000325617 PER1O15534 1290 aaPredicted RBP17.5■□□□□ 0.39
CLGN-201ENST00000325617 LAS1LQ9Y4W2 734 aaKnown RBP17.5■□□□□ 0.39
CLGN-201ENST00000325617 RALBP1Q15311 655 aa17.5■□□□□ 0.39
CLGN-201ENST00000325617 C20orf194Q5TEA3 1177 aa17.5■□□□□ 0.39
CLGN-201ENST00000325617 UHRF1BP1Q6BDS2 1440 aa17.49■□□□□ 0.39
CLGN-201ENST00000325617 NLRP13Q86W25 1043 aa17.49■□□□□ 0.39
CLGN-201ENST00000325617 LRPPRCP42704 1394 aaKnown RBP17.49■□□□□ 0.39
CLGN-201ENST00000325617 CCDC144AA2RUR9 1427 aa17.48■□□□□ 0.39
CLGN-201ENST00000325617 PTPRGP23470 1445 aa17.48■□□□□ 0.39
CLGN-201ENST00000325617 KTN1Q86UP2 1357 aaKnown RBP17.48■□□□□ 0.39
CLGN-201ENST00000325617 ZBTB47Q9UFB7 747 aaPredicted RBP17.48■□□□□ 0.39
CLGN-201ENST00000325617 BRD4O60885 1362 aaPredicted RBP17.47■□□□□ 0.39
CLGN-201ENST00000325617 IPO9Q96P70 1041 aaKnown RBP17.47■□□□□ 0.39
CLGN-201ENST00000325617 CRBNQ96SW2 442 aa17.47■□□□□ 0.39
CLGN-201ENST00000325617 TESK2Q96S53 571 aa17.46■□□□□ 0.39
CLGN-201ENST00000325617 ARID4BQ4LE39 1312 aaPredicted RBP17.46■□□□□ 0.39
CLGN-201ENST00000325617 ADAMTS8Q9UP79 889 aa17.45■□□□□ 0.38
CLGN-201ENST00000325617 PLA2R1Q13018 1463 aa17.44■□□□□ 0.38
CLGN-201ENST00000325617 PLEKHH2Q8IVE3 1493 aa17.44■□□□□ 0.38
CLGN-201ENST00000325617 FAM135AQ9P2D6 1515 aa17.44■□□□□ 0.38
CLGN-201ENST00000325617 ABCA8O94911 1581 aa17.44■□□□□ 0.38
CLGN-201ENST00000325617 NUP160Q12769 1436 aa17.43■□□□□ 0.38
CLGN-201ENST00000325617 PRAG1Q86YV5 1406 aa17.43■□□□□ 0.38
CLGN-201ENST00000325617 SENP3Q9H4L4 574 aaPredicted RBP17.43■□□□□ 0.38
CLGN-201ENST00000325617 ADCY10Q96PN6 1610 aa17.43■□□□□ 0.38
CLGN-201ENST00000325617 PDE4AP27815 886 aa17.42■□□□□ 0.38
CLGN-201ENST00000325617 CCDC146Q8IYE0 955 aa17.42■□□□□ 0.38
CLGN-201ENST00000325617 SLC4A3P48751 1232 aa17.42■□□□□ 0.38
CLGN-201ENST00000325617 SAMD9LQ8IVG5 1584 aa17.41■□□□□ 0.38
CLGN-201ENST00000325617 SYCP2Q9BX26 1530 aa17.41■□□□□ 0.38
CLGN-201ENST00000325617 A2MP01023 1474 aa17.41■□□□□ 0.38
CLGN-201ENST00000325617 PARD3Q8TEW0 1356 aa17.4■□□□□ 0.38
CLGN-201ENST00000325617 MYT1LQ9UL68 1186 aa17.4■□□□□ 0.38
CLGN-201ENST00000325617 KDM5DQ9BY66 1539 aa17.4■□□□□ 0.38
CLGN-201ENST00000325617 CCDC141Q6ZP82 1450 aa17.38■□□□□ 0.37
CLGN-201ENST00000325617 CDC42BPBQ9Y5S2 1711 aa17.38■□□□□ 0.37
CLGN-201ENST00000325617 ARHGAP5Q13017 1502 aa17.38■□□□□ 0.37
CLGN-201ENST00000325617 AFAP1Q8N556 730 aa17.37■□□□□ 0.37
CLGN-201ENST00000325617 ARHGEF12Q9NZN5 1544 aa17.37■□□□□ 0.37
CLGN-201ENST00000325617 TMF1P82094 1093 aa17.37■□□□□ 0.37
CLGN-201ENST00000325617 SHANK2Q9UPX8 1470 aa17.35■□□□□ 0.37
CLGN-201ENST00000325617 ERBINQ96RT1 1412 aa17.34■□□□□ 0.37
CLGN-201ENST00000325617 ERCC6L2Q5T890 1561 aa17.33■□□□□ 0.37
CLGN-201ENST00000325617 TRPM1Q7Z4N2 1603 aa17.33■□□□□ 0.37
CLGN-201ENST00000325617 RTL5Q5HYW3 569 aaPredicted RBP17.33■□□□□ 0.36
CLGN-201ENST00000325617 KNSTRNQ9Y448 316 aa17.33■□□□□ 0.36
CLGN-201ENST00000325617 TTC37Q6PGP7 1564 aa17.33■□□□□ 0.36
CLGN-201ENST00000325617 BACH2Q9BYV9 841 aa17.32■□□□□ 0.36
CLGN-201ENST00000325617 PPP2R1AP30153 589 aa17.31■□□□□ 0.36
CLGN-201ENST00000325617 SPINK5Q9NQ38 1064 aaPredicted RBP17.31■□□□□ 0.36
CLGN-201ENST00000325617 TNNT2P45379 298 aaPredicted RBP17.31■□□□□ 0.36
CLGN-201ENST00000325617 PLEKHH1Q9ULM0 1364 aa17.31■□□□□ 0.36
CLGN-201ENST00000325617 E9PCH4 1651 aa17.31■□□□□ 0.36
CLGN-201ENST00000325617 RGS3P49796 1198 aa17.31■□□□□ 0.36
CLGN-201ENST00000325617 WDR43Q15061 677 aaKnown RBP eCLIP17.31■□□□□ 0.36
CLGN-201ENST00000325617 RTN4Q9NQC3 1192 aaKnown RBP17.3■□□□□ 0.36
CLGN-201ENST00000325617 TCERG1O14776 1098 aaKnown RBP17.3■□□□□ 0.36
CLGN-201ENST00000325617 ANO8Q9HCE9 1232 aaPredicted RBP17.29■□□□□ 0.36
CLGN-201ENST00000325617 COL17A1Q9UMD9 1497 aaPredicted RBP17.29■□□□□ 0.36
CLGN-201ENST00000325617 NEFMP07197 916 aa17.28■□□□□ 0.36
CLGN-201ENST00000325617 DMRT2Q9Y5R5 561 aa17.28■□□□□ 0.36
CLGN-201ENST00000325617 MAGI2Q86UL8 1455 aa17.28■□□□□ 0.36
CLGN-201ENST00000325617 PDE3BQ13370 1112 aa17.28■□□□□ 0.36
CLGN-201ENST00000325617 NEUROD2Q15784 382 aa17.27■□□□□ 0.36
CLGN-201ENST00000325617 APAF1O14727 1248 aa17.26■□□□□ 0.35
CLGN-201ENST00000325617 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.26■□□□□ 0.35
CLGN-201ENST00000325617 BCAR3O75815 825 aa17.26■□□□□ 0.35
CLGN-201ENST00000325617 CFAP70Q5T0N1 1121 aa17.26■□□□□ 0.35
CLGN-201ENST00000325617 ARHGEF5Q12774 1597 aa17.25■□□□□ 0.35
CLGN-201ENST00000325617 TRAPPC8Q9Y2L5 1435 aa17.25■□□□□ 0.35
CLGN-201ENST00000325617 CHGAP10645 457 aaKnown RBP17.25■□□□□ 0.35
CLGN-201ENST00000325617 DUSP27Q5VZP5 1158 aa17.25■□□□□ 0.35
CLGN-201ENST00000325617 AMER1Q5JTC6 1135 aaPredicted RBP17.24■□□□□ 0.35
CLGN-201ENST00000325617 RSPH4AQ5TD94 716 aa17.24■□□□□ 0.35
CLGN-201ENST00000325617 MYO5CQ9NQX4 1742 aa17.24■□□□□ 0.35
CLGN-201ENST00000325617 PREX2Q70Z35 1606 aa17.24■□□□□ 0.35
CLGN-201ENST00000325617 GPRASP1Q5JY77 1395 aa17.23■□□□□ 0.35
CLGN-201ENST00000325617 IL27Q8NEV9 243 aa17.23■□□□□ 0.35
CLGN-201ENST00000325617 RRP7AQ9Y3A4 280 aaKnown RBP17.22■□□□□ 0.35
CLGN-201ENST00000325617 KIF3BO15066 747 aa17.21■□□□□ 0.35
CLGN-201ENST00000325617 EFCAB2Q5VUJ9 269 aa17.21■□□□□ 0.35
CLGN-201ENST00000325617 NUTM2DQ5VT03 806 aaPredicted RBP17.21■□□□□ 0.35
CLGN-201ENST00000325617 SPAG9O60271 1321 aaKnown RBP17.2■□□□□ 0.34
CLGN-201ENST00000325617 GOLGA2Q08379 1002 aa17.2■□□□□ 0.34
CLGN-201ENST00000325617 PRDM15P57071 1507 aaPredicted RBP17.2■□□□□ 0.34
CLGN-201ENST00000325617 WDR7Q9Y4E6 1490 aa17.19■□□□□ 0.34
CLGN-201ENST00000325617 BLMP54132 1417 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms