RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 FBXW7Q969H0 707 aa9.95□□□□□ -0.82
CBX3P1-201ENST00000325243 RABGEF1Q9UJ41 708 aa9.92□□□□□ -0.82
CBX3P1-201ENST00000325243 C6orf132Q5T0Z8 1188 aa9.9□□□□□ -0.82
CBX3P1-201ENST00000325243 EPAS1Q99814 870 aa9.9□□□□□ -0.82
CBX3P1-201ENST00000325243 DDX12PQ92771 950 aa9.89□□□□□ -0.83
CBX3P1-201ENST00000325243 SPRYD3Q8NCJ5 442 aa9.87□□□□□ -0.83
CBX3P1-201ENST00000325243 RBM33Q96EV2 1170 aaKnown RBP9.87□□□□□ -0.83
CBX3P1-201ENST00000325243 KIAA1468Q9P260 1216 aa9.87□□□□□ -0.83
CBX3P1-201ENST00000325243 BCAMP50895 628 aa9.85□□□□□ -0.83
CBX3P1-201ENST00000325243 IFFO2Q5TF58 517 aa9.85□□□□□ -0.83
CBX3P1-201ENST00000325243 ANKK1Q8NFD2 765 aa9.85□□□□□ -0.83
CBX3P1-201ENST00000325243 PDIA6Q15084 440 aa9.84□□□□□ -0.83
CBX3P1-201ENST00000325243 LAPTM4BQ86VI4 370 aa9.84□□□□□ -0.83
CBX3P1-201ENST00000325243 RTN4Q9NQC3 1192 aaKnown RBP9.84□□□□□ -0.83
CBX3P1-201ENST00000325243 SEPT9Q9UHD8 586 aaPredicted RBP9.84□□□□□ -0.83
CBX3P1-201ENST00000325243 ZFRQ96KR1 1074 aaKnown RBP9.83□□□□□ -0.84
CBX3P1-201ENST00000325243 TRIM6-TRIM34B2RNG4 842 aa9.82□□□□□ -0.84
CBX3P1-201ENST00000325243 ONECUT3O60422 494 aaPredicted RBP9.82□□□□□ -0.84
CBX3P1-201ENST00000325243 NBR1Q14596 966 aa9.82□□□□□ -0.84
CBX3P1-201ENST00000325243 TSR1Q2NL82 804 aaKnown RBP9.82□□□□□ -0.84
CBX3P1-201ENST00000325243 AMER1Q5JTC6 1135 aaPredicted RBP9.82□□□□□ -0.84
CBX3P1-201ENST00000325243 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.82□□□□□ -0.84
CBX3P1-201ENST00000325243 SOWAHBA6NEL2 793 aa9.81□□□□□ -0.84
CBX3P1-201ENST00000325243 EN1Q05925 392 aaPredicted RBP9.81□□□□□ -0.84
CBX3P1-201ENST00000325243 A0A0G2JS52 829 aa9.79□□□□□ -0.84
CBX3P1-201ENST00000325243 MAP3K7O43318 606 aa9.79□□□□□ -0.84
CBX3P1-201ENST00000325243 PAXIP1Q6ZW49 1069 aaPredicted RBP9.79□□□□□ -0.84
CBX3P1-201ENST00000325243 SPDYE16A6NNV3 312 aaPredicted RBP9.78□□□□□ -0.84
CBX3P1-201ENST00000325243 PRIM1P49642 420 aaKnown RBP9.78□□□□□ -0.84
CBX3P1-201ENST00000325243 E2F4Q16254 413 aa9.78□□□□□ -0.84
CBX3P1-201ENST00000325243 CFAP44Q96MT7 982 aa9.78□□□□□ -0.84
CBX3P1-201ENST00000325243 FAM98CQ17RN3 349 aaKnown RBP9.77□□□□□ -0.85
CBX3P1-201ENST00000325243 WBP1LQ9NX94 342 aa9.77□□□□□ -0.85
CBX3P1-201ENST00000325243 TSKSQ9UJT2 592 aa9.77□□□□□ -0.85
CBX3P1-201ENST00000325243 ITGBL1O95965 494 aaPredicted RBP9.75□□□□□ -0.85
CBX3P1-201ENST00000325243 ARIH1Q9Y4X5 557 aaPredicted RBP9.75□□□□□ -0.85
CBX3P1-201ENST00000325243 RGS20O76081 388 aa9.73□□□□□ -0.85
CBX3P1-201ENST00000325243 FAM198AQ9UFP1 575 aa9.73□□□□□ -0.85
CBX3P1-201ENST00000325243 GRXCR2A6NFK2 248 aa9.72□□□□□ -0.85
CBX3P1-201ENST00000325243 PACS2Q86VP3 889 aa9.72□□□□□ -0.85
CBX3P1-201ENST00000325243 WDR70Q9NW82 654 aa9.72□□□□□ -0.85
CBX3P1-201ENST00000325243 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.72□□□□□ -0.85
CBX3P1-201ENST00000325243 C3orf80F5H4A9 247 aa9.71□□□□□ -0.86
CBX3P1-201ENST00000325243 NYAP1Q6ZVC0 841 aa9.71□□□□□ -0.86
CBX3P1-201ENST00000325243 CDCA7LQ96GN5 454 aa9.71□□□□□ -0.86
CBX3P1-201ENST00000325243 LRCH3Q96II8 777 aa9.71□□□□□ -0.86
CBX3P1-201ENST00000325243 HPS5Q9UPZ3 1129 aa9.71□□□□□ -0.86
CBX3P1-201ENST00000325243 SMAPO00193 183 aa9.7□□□□□ -0.86
CBX3P1-201ENST00000325243 PRSS12P56730 875 aa9.7□□□□□ -0.86
CBX3P1-201ENST00000325243 TSR3Q9UJK0 312 aaKnown RBP9.7□□□□□ -0.86
CBX3P1-201ENST00000325243 OSBPP22059 807 aa9.68□□□□□ -0.86
CBX3P1-201ENST00000325243 CDHR5Q9HBB8 845 aa9.68□□□□□ -0.86
CBX3P1-201ENST00000325243 KCNC4Q03721 635 aa9.66□□□□□ -0.86
CBX3P1-201ENST00000325243 CERKQ8TCT0 537 aa9.66□□□□□ -0.86
CBX3P1-201ENST00000325243 SAMD7Q7Z3H4 446 aa9.65□□□□□ -0.86
CBX3P1-201ENST00000325243 TATDN2Q93075 761 aa9.64□□□□□ -0.87
CBX3P1-201ENST00000325243 IRX2Q9BZI1 471 aaPredicted RBP9.64□□□□□ -0.87
CBX3P1-201ENST00000325243 PNMA3Q9UL41 463 aa9.63□□□□□ -0.87
CBX3P1-201ENST00000325243 NBPF26B4DH59 902 aa9.62□□□□□ -0.87
CBX3P1-201ENST00000325243 PPP4CP60510 307 aa9.62□□□□□ -0.87
CBX3P1-201ENST00000325243 NUDT18Q6ZVK8 323 aa9.6□□□□□ -0.87
CBX3P1-201ENST00000325243 NPDC1Q9NQX5 325 aaPredicted RBP9.6□□□□□ -0.87
CBX3P1-201ENST00000325243 RBM27Q9P2N5 1060 aaKnown RBP9.59□□□□□ -0.87
CBX3P1-201ENST00000325243 TJAP1Q5JTD0 557 aa9.58□□□□□ -0.88
CBX3P1-201ENST00000325243 TTC13Q8NBP0 860 aa9.58□□□□□ -0.88
CBX3P1-201ENST00000325243 TSHZ2Q9NRE2 1034 aa9.58□□□□□ -0.88
CBX3P1-201ENST00000325243 PADI6Q6TGC4 694 aa9.56□□□□□ -0.88
CBX3P1-201ENST00000325243 RNF40O75150 1001 aa9.54□□□□□ -0.88
CBX3P1-201ENST00000325243 MLLT3P42568 568 aaPredicted RBP9.54□□□□□ -0.88
CBX3P1-201ENST00000325243 KCNV2Q8TDN2 545 aa9.54□□□□□ -0.88
CBX3P1-201ENST00000325243 MTRQ99707 1265 aa9.54□□□□□ -0.88
CBX3P1-201ENST00000325243 APLP1P51693 650 aa9.52□□□□□ -0.89
CBX3P1-201ENST00000325243 SWT1Q5T5J6 900 aaKnown RBP9.51□□□□□ -0.89
CBX3P1-201ENST00000325243 ZNF516Q92618 1163 aa9.51□□□□□ -0.89
CBX3P1-201ENST00000325243 ARHGEF1Q92888 912 aaKnown RBP9.51□□□□□ -0.89
CBX3P1-201ENST00000325243 IL21Q9HBE4 155 aa9.51□□□□□ -0.89
CBX3P1-201ENST00000325243 HDGFP51858 240 aaKnown RBP9.5□□□□□ -0.89
CBX3P1-201ENST00000325243 EYA1Q99502 592 aa9.49□□□□□ -0.89
CBX3P1-201ENST00000325243 PPP1R18Q6NYC8 613 aa9.47□□□□□ -0.89
CBX3P1-201ENST00000325243 NKX2-3Q8TAU0 364 aa9.46□□□□□ -0.9
CBX3P1-201ENST00000325243 PTGDRQ13258 359 aa9.45□□□□□ -0.9
CBX3P1-201ENST00000325243 Q6ZNB5 142 aa9.45□□□□□ -0.9
CBX3P1-201ENST00000325243 SLF2Q8IX21 1173 aa9.45□□□□□ -0.9
CBX3P1-201ENST00000325243 PRKD2Q9BZL6 878 aa9.44□□□□□ -0.9
CBX3P1-201ENST00000325243 COPS2P61201 443 aa9.43□□□□□ -0.9
CBX3P1-201ENST00000325243 NECTIN2Q92692 538 aa9.42□□□□□ -0.9
CBX3P1-201ENST00000325243 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.41□□□□□ -0.9
CBX3P1-201ENST00000325243 LCE2BO14633 110 aa9.4□□□□□ -0.9
CBX3P1-201ENST00000325243 FAM161AQ3B820 660 aa9.4□□□□□ -0.9
CBX3P1-201ENST00000325243 ADGRG1Q9Y653 693 aa9.4□□□□□ -0.9
CBX3P1-201ENST00000325243 NUTM2FA1L443 756 aa9.39□□□□□ -0.91
CBX3P1-201ENST00000325243 GFRA3O60609 400 aa9.39□□□□□ -0.91
CBX3P1-201ENST00000325243 SEMA3EO15041 775 aa9.38□□□□□ -0.91
CBX3P1-201ENST00000325243 DNAJB2P25686 324 aa9.38□□□□□ -0.91
CBX3P1-201ENST00000325243 TMEM134Q9H6X4 195 aa9.38□□□□□ -0.91
CBX3P1-201ENST00000325243 ZPR1O75312 459 aa9.37□□□□□ -0.91
CBX3P1-201ENST00000325243 SLC4A3P48751 1232 aa9.37□□□□□ -0.91
CBX3P1-201ENST00000325243 LAPTM4AQ15012 233 aa9.37□□□□□ -0.91
CBX3P1-201ENST00000325243 RBM46Q8TBY0 533 aaKnown RBP9.37□□□□□ -0.91
CBX3P1-201ENST00000325243 V9GY48 417 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms