RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 DNMT1P26358 1616 aaKnown RBP19.68■□□□□ 0.74
TPM3-204ENST00000323144 LTBP4Q8N2S1 1624 aa19.68■□□□□ 0.74
TPM3-204ENST00000323144 PTPRTO14522 1441 aa19.68■□□□□ 0.74
TPM3-204ENST00000323144 KANK4Q5T7N3 995 aaPredicted RBP19.67■□□□□ 0.74
TPM3-204ENST00000323144 GGT6Q6P531 493 aa19.67■□□□□ 0.74
TPM3-204ENST00000323144 PZPP20742 1482 aa19.66■□□□□ 0.74
TPM3-204ENST00000323144 PLA2R1Q13018 1463 aa19.65■□□□□ 0.74
TPM3-204ENST00000323144 ABCC3O15438 1527 aa19.64■□□□□ 0.73
TPM3-204ENST00000323144 NEURL4Q96JN8 1562 aa19.64■□□□□ 0.73
TPM3-204ENST00000323144 TCOF1Q13428 1488 aaKnown RBP19.63■□□□□ 0.73
TPM3-204ENST00000323144 MIA2Q96PC5 1412 aa19.63■□□□□ 0.73
TPM3-204ENST00000323144 CERKQ8TCT0 537 aa19.63■□□□□ 0.73
TPM3-204ENST00000323144 A2ML1A8K2U0 1454 aa19.62■□□□□ 0.73
TPM3-204ENST00000323144 SHANK2Q9UPX8 1470 aa19.61■□□□□ 0.73
TPM3-204ENST00000323144 PRDM15P57071 1507 aaPredicted RBP19.6■□□□□ 0.73
TPM3-204ENST00000323144 DEPDC5O75140 1603 aa19.59■□□□□ 0.73
TPM3-204ENST00000323144 KIF3BO15066 747 aa19.59■□□□□ 0.73
TPM3-204ENST00000323144 SPATA31D1Q6ZQQ2 1576 aa19.57■□□□□ 0.72
TPM3-204ENST00000323144 DUOX2Q9NRD8 1548 aa19.57■□□□□ 0.72
TPM3-204ENST00000323144 TNRQ92752 1358 aa19.56■□□□□ 0.72
TPM3-204ENST00000323144 FGD6Q6ZV73 1430 aa19.55■□□□□ 0.72
TPM3-204ENST00000323144 DMRT2Q9Y5R5 561 aa19.55■□□□□ 0.72
TPM3-204ENST00000323144 NCKAP5LQ9HCH0 1330 aa19.53■□□□□ 0.72
TPM3-204ENST00000323144 ABCC5O15440 1437 aa19.53■□□□□ 0.72
TPM3-204ENST00000323144 DAPK1P53355 1430 aa19.53■□□□□ 0.72
TPM3-204ENST00000323144 ERVK-7P63135 1459 aa19.53■□□□□ 0.72
TPM3-204ENST00000323144 UBR1Q8IWV7 1749 aa19.52■□□□□ 0.72
TPM3-204ENST00000323144 RSPH4AQ5TD94 716 aa19.52■□□□□ 0.72
TPM3-204ENST00000323144 PPP6R1Q9UPN7 881 aa19.52■□□□□ 0.72
TPM3-204ENST00000323144 IQSEC2Q5JU85 1478 aa19.52■□□□□ 0.72
TPM3-204ENST00000323144 FBXO31Q5XUX0 539 aaPredicted RBP19.51■□□□□ 0.71
TPM3-204ENST00000323144 UGGT1Q9NYU2 1555 aa19.5■□□□□ 0.71
TPM3-204ENST00000323144 NLRP1Q9C000 1473 aa19.5■□□□□ 0.71
TPM3-204ENST00000323144 KIF15Q9NS87 1388 aa19.5■□□□□ 0.71
TPM3-204ENST00000323144 IQGAP1P46940 1657 aa19.49■□□□□ 0.71
TPM3-204ENST00000323144 CFAP65Q6ZU64 1925 aaKnown RBP19.49■□□□□ 0.71
TPM3-204ENST00000323144 TSPY4P0CV99 314 aa19.49■□□□□ 0.71
TPM3-204ENST00000323144 TSPY10P0CW01 314 aa19.49■□□□□ 0.71
TPM3-204ENST00000323144 ERBINQ96RT1 1412 aa19.49■□□□□ 0.71
TPM3-204ENST00000323144 ZNF335Q9H4Z2 1342 aaPredicted RBP19.48■□□□□ 0.71
TPM3-204ENST00000323144 WASHC2CQ9Y4E1 1318 aa19.48■□□□□ 0.71
TPM3-204ENST00000323144 VWDEQ8N2E2 1590 aa19.45■□□□□ 0.7
TPM3-204ENST00000323144 STRCP1A6NGW2 1772 aa19.44■□□□□ 0.7
TPM3-204ENST00000323144 PIK3C2BO00750 1634 aa19.43■□□□□ 0.7
TPM3-204ENST00000323144 PKD2Q13563 968 aa19.42■□□□□ 0.7
TPM3-204ENST00000323144 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.42■□□□□ 0.73e-7■■□□□ 11.8
TPM3-204ENST00000323144 ADGRL2O95490 1459 aa19.41■□□□□ 0.7
TPM3-204ENST00000323144 EFCAB6Q5THR3 1501 aa19.41■□□□□ 0.7
TPM3-204ENST00000323144 SYNMO15061 1565 aa19.4■□□□□ 0.7
TPM3-204ENST00000323144 APLP2Q06481 763 aa19.39■□□□□ 0.69
TPM3-204ENST00000323144 MED14O60244 1454 aa19.38■□□□□ 0.69
TPM3-204ENST00000323144 LMTK2Q8IWU2 1503 aa19.38■□□□□ 0.69
TPM3-204ENST00000323144 CPS1P31327 1500 aa19.37■□□□□ 0.69
TPM3-204ENST00000323144 NPHP4O75161 1426 aaPredicted RBP19.36■□□□□ 0.69
TPM3-204ENST00000323144 UNC13BO14795 1591 aa19.36■□□□□ 0.69
TPM3-204ENST00000323144 ARHGAP31Q2M1Z3 1444 aa19.35■□□□□ 0.69
TPM3-204ENST00000323144 RRP7BPQ9NSQ0 103 aa19.35■□□□□ 0.69
TPM3-204ENST00000323144 KDM5AP29375 1690 aaKnown RBP19.35■□□□□ 0.69
TPM3-204ENST00000323144 GCC2Q8IWJ2 1684 aa19.33■□□□□ 0.69
TPM3-204ENST00000323144 ANKRD30AQ9BXX3 1397 aa19.33■□□□□ 0.69
TPM3-204ENST00000323144 ALKQ9UM73 1620 aa19.33■□□□□ 0.69
TPM3-204ENST00000323144 SLIT1O75093 1534 aa19.33■□□□□ 0.68
TPM3-204ENST00000323144 TET3O43151 1660 aa19.33■□□□□ 0.68
TPM3-204ENST00000323144 MYO5BQ9ULV0 1848 aa19.32■□□□□ 0.68
TPM3-204ENST00000323144 ARHGAP23Q9P227 1491 aa19.32■□□□□ 0.68
TPM3-204ENST00000323144 ADGRB3O60242 1522 aa19.31■□□□□ 0.68
TPM3-204ENST00000323144 SCAF11Q99590 1463 aaKnown RBP19.31■□□□□ 0.68
TPM3-204ENST00000323144 CHIC2Q9UKJ5 165 aa19.31■□□□□ 0.68
TPM3-204ENST00000323144 XIRP1Q702N8 1843 aaKnown RBP19.3■□□□□ 0.68
TPM3-204ENST00000323144 THEMISQ8N1K5 641 aaPredicted RBP19.26■□□□□ 0.67
TPM3-204ENST00000323144 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.26■□□□□ 0.671e-11■■■■■ 30.9
TPM3-204ENST00000323144 KANK1Q14678 1352 aa19.26■□□□□ 0.67
TPM3-204ENST00000323144 E9PCH4 1651 aa19.26■□□□□ 0.67
TPM3-204ENST00000323144 FAM50AQ14320 339 aaKnown RBP19.25■□□□□ 0.67
TPM3-204ENST00000323144 ANKLE2Q86XL3 938 aa19.25■□□□□ 0.67
TPM3-204ENST00000323144 IQGAP3Q86VI3 1631 aa19.25■□□□□ 0.67
TPM3-204ENST00000323144 UBAP1LF5GYI3 381 aa19.24■□□□□ 0.67
TPM3-204ENST00000323144 NOS1P29475 1434 aa19.24■□□□□ 0.67
TPM3-204ENST00000323144 ANKRD50Q9ULJ7 1429 aa19.24■□□□□ 0.67
TPM3-204ENST00000323144 LRRC7Q96NW7 1537 aa19.23■□□□□ 0.67
TPM3-204ENST00000323144 DISP3Q9P2K9 1392 aa19.2■□□□□ 0.66
TPM3-204ENST00000323144 RPRD2Q5VT52 1461 aaKnown RBP19.19■□□□□ 0.66
TPM3-204ENST00000323144 TMEM131LA2VDJ0 1609 aa19.18■□□□□ 0.66
TPM3-204ENST00000323144 NWD1Q149M9 1564 aa19.18■□□□□ 0.66
TPM3-204ENST00000323144 MED1Q15648 1581 aaPredicted RBP19.17■□□□□ 0.66
TPM3-204ENST00000323144 TMEM2Q9UHN6 1383 aa19.17■□□□□ 0.66
TPM3-204ENST00000323144 LTKP29376 864 aa19.16■□□□□ 0.66
TPM3-204ENST00000323144 SPHKAPQ2M3C7 1700 aa19.14■□□□□ 0.65
TPM3-204ENST00000323144 ROCK1Q13464 1354 aa19.13■□□□□ 0.65
TPM3-204ENST00000323144 SCAF1Q9H7N4 1312 aaKnown RBP19.12■□□□□ 0.65
TPM3-204ENST00000323144 ZFYVE9O95405 1425 aa19.1■□□□□ 0.65
TPM3-204ENST00000323144 PIP4K2BP78356 416 aa19.1■□□□□ 0.65
TPM3-204ENST00000323144 ILDR2Q71H61 639 aa19.1■□□□□ 0.65
TPM3-204ENST00000323144 PPARGC1BQ86YN6 1023 aaKnown RBP19.1■□□□□ 0.65
TPM3-204ENST00000323144 IDI1Q13907 227 aa19.09■□□□□ 0.65
TPM3-204ENST00000323144 TXNDC2Q86VQ3 553 aa19.09■□□□□ 0.65
TPM3-204ENST00000323144 CHD2O14647 1828 aaKnown RBP19.07■□□□□ 0.64
TPM3-204ENST00000323144 NKTRP30414 1462 aaKnown RBP19.06■□□□□ 0.64
TPM3-204ENST00000323144 HSPA1LP34931 641 aa19.06■□□□□ 0.64
TPM3-204ENST00000323144 STAG3Q9UJ98 1225 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms