RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 RTN4Q9NQC3 1192 aaKnown RBP15.59■□□□□ 0.09
CACNA1F-201ENST00000323022 ANKRD30AQ9BXX3 1397 aa15.58■□□□□ 0.09
CACNA1F-201ENST00000323022 CALD1Q05682 793 aaKnown RBP15.58■□□□□ 0.08
CACNA1F-201ENST00000323022 COG3Q96JB2 828 aa15.58■□□□□ 0.08
CACNA1F-201ENST00000323022 NLRP2Q9NX02 1062 aa15.58■□□□□ 0.08
CACNA1F-201ENST00000323022 MCCP23508 829 aa15.57■□□□□ 0.08
CACNA1F-201ENST00000323022 TEFQ10587 303 aa15.57■□□□□ 0.08
CACNA1F-201ENST00000323022 FAM177BA6PVY3 158 aa15.57■□□□□ 0.08
CACNA1F-201ENST00000323022 HSP90AB1P08238 724 aaKnown RBP15.56■□□□□ 0.08
CACNA1F-201ENST00000323022 ESCO1Q5FWF5 840 aa15.55■□□□□ 0.08
CACNA1F-201ENST00000323022 CHMP4AQ9BY43 222 aa15.55■□□□□ 0.08
CACNA1F-201ENST00000323022 EIF3AQ14152 1382 aaKnown RBP15.55■□□□□ 0.08
CACNA1F-201ENST00000323022 ARHGAP35Q9NRY4 1499 aa15.55■□□□□ 0.08
CACNA1F-201ENST00000323022 HSP90B1P14625 803 aaKnown RBP15.55■□□□□ 0.08
CACNA1F-201ENST00000323022 EIF2S2P20042 333 aaKnown RBP15.55■□□□□ 0.08
CACNA1F-201ENST00000323022 FANCD2Q9BXW9 1451 aa15.55■□□□□ 0.08
CACNA1F-201ENST00000323022 VPS8Q8N3P4 1428 aa15.54■□□□□ 0.08
CACNA1F-201ENST00000323022 NRDCO43847 1150 aa15.54■□□□□ 0.08
CACNA1F-201ENST00000323022 GPATCH3Q96I76 525 aa15.54■□□□□ 0.08
CACNA1F-201ENST00000323022 ITPRIPQ8IWB1 547 aa15.53■□□□□ 0.08
CACNA1F-201ENST00000323022 AMOTL1Q8IY63 956 aa15.53■□□□□ 0.08
CACNA1F-201ENST00000323022 CFAP44Q96MT7 982 aa15.53■□□□□ 0.08
CACNA1F-201ENST00000323022 FMN1Q68DA7 1419 aa15.52■□□□□ 0.08
CACNA1F-201ENST00000323022 NECTIN2Q92692 538 aa15.52■□□□□ 0.07
CACNA1F-201ENST00000323022 RAPGEF2Q9Y4G8 1499 aa15.52■□□□□ 0.07
CACNA1F-201ENST00000323022 RAPGEF4Q8WZA2 1011 aa15.51■□□□□ 0.07
CACNA1F-201ENST00000323022 VGFO15240 615 aaPredicted RBP15.51■□□□□ 0.07
CACNA1F-201ENST00000323022 DHX16O60231 1041 aaKnown RBP15.51■□□□□ 0.07
CACNA1F-201ENST00000323022 TRIM6-TRIM34B2RNG4 842 aa15.51■□□□□ 0.07
CACNA1F-201ENST00000323022 KANK4Q5T7N3 995 aaPredicted RBP15.5■□□□□ 0.07
CACNA1F-201ENST00000323022 IPO8O15397 1037 aaKnown RBP15.5■□□□□ 0.07
CACNA1F-201ENST00000323022 CREBRFQ8IUR6 639 aa15.5■□□□□ 0.07
CACNA1F-201ENST00000323022 RBM42Q9BTD8 480 aaKnown RBP15.5■□□□□ 0.07
CACNA1F-201ENST00000323022 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.49■□□□□ 0.07
CACNA1F-201ENST00000323022 B4GALNT3Q6L9W6 998 aa15.48■□□□□ 0.07
CACNA1F-201ENST00000323022 PDE3BQ13370 1112 aa15.48■□□□□ 0.07
CACNA1F-201ENST00000323022 TXNDC2Q86VQ3 553 aa15.48■□□□□ 0.07
CACNA1F-201ENST00000323022 SLC4A3P48751 1232 aa15.47■□□□□ 0.07
CACNA1F-201ENST00000323022 WASHC2AQ641Q2 1341 aa15.47■□□□□ 0.07
CACNA1F-201ENST00000323022 KIAA2012Q0VF49 1180 aa15.47■□□□□ 0.07
CACNA1F-201ENST00000323022 HDAC5Q9UQL6 1122 aa15.47■□□□□ 0.07
CACNA1F-201ENST00000323022 FHOD3Q2V2M9 1422 aa15.46■□□□□ 0.06
CACNA1F-201ENST00000323022 ERICH6BQ5W0A0 696 aa15.45■□□□□ 0.06
CACNA1F-201ENST00000323022 CCDC146Q8IYE0 955 aa15.45■□□□□ 0.06
CACNA1F-201ENST00000323022 ELL2O00472 640 aaPredicted RBP15.45■□□□□ 0.06
CACNA1F-201ENST00000323022 SPRYD3Q8NCJ5 442 aa15.45■□□□□ 0.06
CACNA1F-201ENST00000323022 FYB1O15117 783 aa15.44■□□□□ 0.06
CACNA1F-201ENST00000323022 RSPH4AQ5TD94 716 aa15.44■□□□□ 0.06
CACNA1F-201ENST00000323022 KTN1Q86UP2 1357 aaKnown RBP15.43■□□□□ 0.06
CACNA1F-201ENST00000323022 NEXNQ0ZGT2 675 aa15.43■□□□□ 0.06
CACNA1F-201ENST00000323022 MPHOSPH9Q99550 1183 aa15.43■□□□□ 0.06
CACNA1F-201ENST00000323022 L1TD1Q5T7N2 865 aaKnown RBP15.42■□□□□ 0.06
CACNA1F-201ENST00000323022 LMOD3Q0VAK6 560 aa15.42■□□□□ 0.06
CACNA1F-201ENST00000323022 SETD5Q9C0A6 1442 aa15.42■□□□□ 0.06
CACNA1F-201ENST00000323022 TCERG1O14776 1098 aaKnown RBP15.42■□□□□ 0.06
CACNA1F-201ENST00000323022 NAP1L5Q96NT1 182 aaPredicted RBP15.42■□□□□ 0.06
CACNA1F-201ENST00000323022 FBXO3Q9UK99 471 aa15.41■□□□□ 0.06
CACNA1F-201ENST00000323022 SMC4Q9NTJ3 1288 aa15.41■□□□□ 0.06
CACNA1F-201ENST00000323022 ADAMTS2O95450 1211 aa15.41■□□□□ 0.06
CACNA1F-201ENST00000323022 CHAF1AQ13111 956 aaPredicted RBP15.41■□□□□ 0.06
CACNA1F-201ENST00000323022 DDX54Q8TDD1 881 aaKnown RBP15.41■□□□□ 0.06
CACNA1F-201ENST00000323022 PLIN1O60240 522 aa15.4■□□□□ 0.06
CACNA1F-201ENST00000323022 TOM1L2Q6ZVM7 507 aa15.4■□□□□ 0.06
CACNA1F-201ENST00000323022 APPP05067 770 aa15.39■□□□□ 0.05
CACNA1F-201ENST00000323022 GPRASP1Q5JY77 1395 aa15.39■□□□□ 0.05
CACNA1F-201ENST00000323022 NOL8Q76FK4 1167 aaKnown RBP15.38■□□□□ 0.05
CACNA1F-201ENST00000323022 AIMP1Q12904 312 aaKnown RBP15.38■□□□□ 0.05
CACNA1F-201ENST00000323022 CCDC27Q2M243 656 aa15.38■□□□□ 0.05
CACNA1F-201ENST00000323022 RRP7AQ9Y3A4 280 aaKnown RBP15.38■□□□□ 0.05
CACNA1F-201ENST00000323022 EVC2Q86UK5 1308 aa15.38■□□□□ 0.05
CACNA1F-201ENST00000323022 DRC7Q8IY82 874 aa15.38■□□□□ 0.05
CACNA1F-201ENST00000323022 ABTB2Q8N961 1025 aa15.38■□□□□ 0.05
CACNA1F-201ENST00000323022 MTMR7Q9Y216 660 aa15.38■□□□□ 0.05
CACNA1F-201ENST00000323022 SUPT16HQ9Y5B9 1047 aaKnown RBP15.38■□□□□ 0.05
CACNA1F-201ENST00000323022 IKQ13123 557 aaPredicted RBP15.38■□□□□ 0.05
CACNA1F-201ENST00000323022 C9orf78Q9NZ63 289 aaPredicted RBP15.38■□□□□ 0.05
CACNA1F-201ENST00000323022 HSPA5P11021 654 aaKnown RBP15.37■□□□□ 0.05
CACNA1F-201ENST00000323022 NLRP6P59044 892 aa15.37■□□□□ 0.05
CACNA1F-201ENST00000323022 CCDC18Q5T9S5 1454 aa15.37■□□□□ 0.05
CACNA1F-201ENST00000323022 NOC3LQ8WTT2 800 aaKnown RBP15.37■□□□□ 0.05
CACNA1F-201ENST00000323022 PMFBP1Q8TBY8 1022 aa15.37■□□□□ 0.05
CACNA1F-201ENST00000323022 CCDC43Q96MW1 224 aaKnown RBP15.37■□□□□ 0.05
CACNA1F-201ENST00000323022 XPCQ01831 940 aaPredicted RBP15.36■□□□□ 0.05
CACNA1F-201ENST00000323022 ANKLE2Q86XL3 938 aa15.36■□□□□ 0.05
CACNA1F-201ENST00000323022 THEMISQ8N1K5 641 aaPredicted RBP15.36■□□□□ 0.05
CACNA1F-201ENST00000323022 HMMRO75330 724 aa15.36■□□□□ 0.05
CACNA1F-201ENST00000323022 DEKP35659 375 aaKnown RBP15.36■□□□□ 0.05
CACNA1F-201ENST00000323022 AKAP17AQ02040 695 aaKnown RBP15.36■□□□□ 0.05
CACNA1F-201ENST00000323022 GRM1Q13255 1194 aa15.35■□□□□ 0.05
CACNA1F-201ENST00000323022 RBM5P52756 815 aaKnown RBP eCLIP15.34■□□□□ 0.05
CACNA1F-201ENST00000323022 HSCBQ8IWL3 235 aa15.34■□□□□ 0.05
CACNA1F-201ENST00000323022 CLUAP1Q96AJ1 413 aa15.34■□□□□ 0.05
CACNA1F-201ENST00000323022 FGD5Q6ZNL6 1462 aa15.34■□□□□ 0.05
CACNA1F-201ENST00000323022 CEP89Q96ST8 783 aa15.34■□□□□ 0.05
CACNA1F-201ENST00000323022 RUSC2Q8N2Y8 1516 aa15.33■□□□□ 0.05
CACNA1F-201ENST00000323022 IBSPP21815 317 aaPredicted RBP15.33■□□□□ 0.05
CACNA1F-201ENST00000323022 NGLY1Q96IV0 654 aa15.33■□□□□ 0.05
CACNA1F-201ENST00000323022 NOP58Q9Y2X3 529 aaKnown RBP15.32■□□□□ 0.04
CACNA1F-201ENST00000323022 BICDL1Q6ZP65 573 aa15.31■□□□□ 0.04
CACNA1F-201ENST00000323022 NCAPD3P42695 1498 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms