RNA–Protein interactions for RNA: ENST00000318887.7

C3orf38-201, Transcript of chromosome 3 open reading frame 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf38, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf38-201ENST00000318887 KIF14Q15058 1648 aa16.88■□□□□ 0.29
C3orf38-201ENST00000318887 TRHP20396 242 aaPredicted RBP16.87■□□□□ 0.29
C3orf38-201ENST00000318887 WDR7Q9Y4E6 1490 aa16.86■□□□□ 0.29
C3orf38-201ENST00000318887 FAM69CQ0P6D2 419 aa16.85■□□□□ 0.29
C3orf38-201ENST00000318887 PNISRQ8TF01 805 aaKnown RBP16.85■□□□□ 0.29
C3orf38-201ENST00000318887 TROQ12816 1431 aaPredicted RBP16.85■□□□□ 0.29
C3orf38-201ENST00000318887 FGD6Q6ZV73 1430 aa16.85■□□□□ 0.29
C3orf38-201ENST00000318887 NAIPQ13075 1403 aa16.84■□□□□ 0.29
C3orf38-201ENST00000318887 DHX29Q7Z478 1369 aaKnown RBP16.84■□□□□ 0.29
C3orf38-201ENST00000318887 POGKQ9P215 609 aa16.83■□□□□ 0.28
C3orf38-201ENST00000318887 FAM161AQ3B820 660 aa16.83■□□□□ 0.28
C3orf38-201ENST00000318887 ZNF777Q9ULD5 760 aaPredicted RBP16.83■□□□□ 0.28
C3orf38-201ENST00000318887 CENPJQ9HC77 1338 aaPredicted RBP16.82■□□□□ 0.28
C3orf38-201ENST00000318887 PDE3BQ13370 1112 aa16.81■□□□□ 0.28
C3orf38-201ENST00000318887 TMC1Q8TDI8 760 aa16.81■□□□□ 0.28
C3orf38-201ENST00000318887 SPATA31E1Q6ZUB1 1445 aa16.81■□□□□ 0.28
C3orf38-201ENST00000318887 EHBP1L1Q8N3D4 1523 aa16.8■□□□□ 0.28
C3orf38-201ENST00000318887 LRPPRCP42704 1394 aaKnown RBP16.79■□□□□ 0.28
C3orf38-201ENST00000318887 TTC37Q6PGP7 1564 aa16.79■□□□□ 0.28
C3orf38-201ENST00000318887 ZNF644Q9H582 1327 aaPredicted RBP16.78■□□□□ 0.28
C3orf38-201ENST00000318887 PTPRKQ15262 1439 aa16.78■□□□□ 0.28
C3orf38-201ENST00000318887 KTN1Q86UP2 1357 aaKnown RBP16.78■□□□□ 0.28
C3orf38-201ENST00000318887 L3MBTL2Q969R5 705 aa16.78■□□□□ 0.28
C3orf38-201ENST00000318887 PDCL3Q9H2J4 239 aa16.78■□□□□ 0.28
C3orf38-201ENST00000318887 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.78■□□□□ 0.28
C3orf38-201ENST00000318887 CALD1Q05682 793 aaKnown RBP16.77■□□□□ 0.28
C3orf38-201ENST00000318887 C8orf34Q49A92 452 aa16.76■□□□□ 0.27
C3orf38-201ENST00000318887 SUPT6HQ7KZ85 1726 aaKnown RBP16.75■□□□□ 0.27
C3orf38-201ENST00000318887 TPM2P07951 284 aa16.75■□□□□ 0.27
C3orf38-201ENST00000318887 GOLGA6L3A6NEY3 463 aa16.75■□□□□ 0.27
C3orf38-201ENST00000318887 TSPOAP1O95153 1857 aa16.75■□□□□ 0.27
C3orf38-201ENST00000318887 MIA2Q96PC5 1412 aa16.74■□□□□ 0.27
C3orf38-201ENST00000318887 RBM10P98175 930 aaKnown RBP16.74■□□□□ 0.27
C3orf38-201ENST00000318887 CENPQQ7L2Z9 268 aaPredicted RBP16.74■□□□□ 0.27
C3orf38-201ENST00000318887 XRCC6P12956 609 aaKnown RBP eCLIP16.73■□□□□ 0.27
C3orf38-201ENST00000318887 CFDP1Q9UEE9 299 aaPredicted RBP16.73■□□□□ 0.27
C3orf38-201ENST00000318887 SKAP1Q86WV1 359 aa16.73■□□□□ 0.27
C3orf38-201ENST00000318887 KDM2BQ8NHM5 1336 aa16.73■□□□□ 0.27
C3orf38-201ENST00000318887 ABCC10Q5T3U5 1492 aa16.73■□□□□ 0.27
C3orf38-201ENST00000318887 DIP2BQ9P265 1576 aa16.72■□□□□ 0.27
C3orf38-201ENST00000318887 BRD4O60885 1362 aaPredicted RBP16.72■□□□□ 0.27
C3orf38-201ENST00000318887 SENP3-EIF4A1A0A087X0R7 540 aa16.72■□□□□ 0.27
C3orf38-201ENST00000318887 ARID4BQ4LE39 1312 aaPredicted RBP16.71■□□□□ 0.27
C3orf38-201ENST00000318887 FSD2A1L4K1 749 aa16.71■□□□□ 0.27
C3orf38-201ENST00000318887 CRBNQ96SW2 442 aa16.71■□□□□ 0.27
C3orf38-201ENST00000318887 GPATCH8Q9UKJ3 1502 aaKnown RBP16.71■□□□□ 0.27
C3orf38-201ENST00000318887 CD109Q6YHK3 1445 aa16.71■□□□□ 0.27
C3orf38-201ENST00000318887 DENND4BO75064 1496 aaPredicted RBP16.71■□□□□ 0.26
C3orf38-201ENST00000318887 AAMPQ13685 434 aa16.7■□□□□ 0.26
C3orf38-201ENST00000318887 BECN1Q14457 450 aa16.69■□□□□ 0.26
C3orf38-201ENST00000318887 KIF13AQ9H1H9 1805 aa16.69■□□□□ 0.26
C3orf38-201ENST00000318887 NBPF8Q3BBV2 869 aa16.68■□□□□ 0.26
C3orf38-201ENST00000318887 MYOM3Q5VTT5 1437 aa16.68■□□□□ 0.26
C3orf38-201ENST00000318887 ARHGAP5Q13017 1502 aa16.68■□□□□ 0.26
C3orf38-201ENST00000318887 ROCK2O75116 1388 aaKnown RBP16.68■□□□□ 0.26
C3orf38-201ENST00000318887 CDC42BPAQ5VT25 1732 aa16.68■□□□□ 0.26
C3orf38-201ENST00000318887 CNGB1Q14028 1251 aaPredicted RBP16.67■□□□□ 0.26
C3orf38-201ENST00000318887 PRDM4Q9UKN5 801 aa16.67■□□□□ 0.26
C3orf38-201ENST00000318887 A0A0U1RQG5 324 aaPredicted RBP16.67■□□□□ 0.26
C3orf38-201ENST00000318887 HNRNPMP52272 730 aaKnown RBP eCLIP16.66■□□□□ 0.26
C3orf38-201ENST00000318887 ESPNB1AK53 854 aa16.66■□□□□ 0.26
C3orf38-201ENST00000318887 ABCA9Q8IUA7 1624 aa16.66■□□□□ 0.26
C3orf38-201ENST00000318887 KIF15Q9NS87 1388 aa16.65■□□□□ 0.26
C3orf38-201ENST00000318887 FGD1P98174 961 aa16.65■□□□□ 0.26
C3orf38-201ENST00000318887 MYBBP1AQ9BQG0 1328 aaKnown RBP16.65■□□□□ 0.26
C3orf38-201ENST00000318887 RPRD2Q5VT52 1461 aaKnown RBP16.65■□□□□ 0.26
C3orf38-201ENST00000318887 TEX14Q8IWB6 1497 aa16.65■□□□□ 0.26
C3orf38-201ENST00000318887 CDC42BPBQ9Y5S2 1711 aa16.65■□□□□ 0.26
C3orf38-201ENST00000318887 MRE11P49959 708 aa16.65■□□□□ 0.26
C3orf38-201ENST00000318887 PLIN1O60240 522 aa16.64■□□□□ 0.25
C3orf38-201ENST00000318887 GCC2Q8IWJ2 1684 aa16.64■□□□□ 0.25
C3orf38-201ENST00000318887 MYO5CQ9NQX4 1742 aa16.64■□□□□ 0.25
C3orf38-201ENST00000318887 PLCH2O75038 1416 aa16.64■□□□□ 0.25
C3orf38-201ENST00000318887 RALBP1Q15311 655 aa16.63■□□□□ 0.25
C3orf38-201ENST00000318887 MPHOSPH9Q99550 1183 aa16.63■□□□□ 0.25
C3orf38-201ENST00000318887 FANCAO15360 1455 aa16.63■□□□□ 0.25
C3orf38-201ENST00000318887 PANK2Q9BZ23 570 aa16.63■□□□□ 0.25
C3orf38-201ENST00000318887 CHIC2Q9UKJ5 165 aa16.63■□□□□ 0.25
C3orf38-201ENST00000318887 EFCAB2Q5VUJ9 269 aa16.62■□□□□ 0.25
C3orf38-201ENST00000318887 MYH16Q9H6N6 1097 aa16.61■□□□□ 0.25
C3orf38-201ENST00000318887 PREX2Q70Z35 1606 aa16.61■□□□□ 0.25
C3orf38-201ENST00000318887 ISY1Q9ULR0 285 aaKnown RBP16.61■□□□□ 0.25
C3orf38-201ENST00000318887 MAP3K4Q9Y6R4 1608 aa16.6■□□□□ 0.25
C3orf38-201ENST00000318887 RAPGEF3O95398 923 aa16.6■□□□□ 0.25
C3orf38-201ENST00000318887 ARXQ96QS3 562 aa16.6■□□□□ 0.25
C3orf38-201ENST00000318887 POLR3GLQ9BT43 218 aa16.6■□□□□ 0.25
C3orf38-201ENST00000318887 AFAP1Q8N556 730 aa16.6■□□□□ 0.25
C3orf38-201ENST00000318887 CAMSAP2Q08AD1 1489 aa16.59■□□□□ 0.25
C3orf38-201ENST00000318887 MAP7D2Q96T17 732 aa16.59■□□□□ 0.25
C3orf38-201ENST00000318887 SLKQ9H2G2 1235 aaPredicted RBP16.59■□□□□ 0.25
C3orf38-201ENST00000318887 ANTXR1Q9H6X2 564 aa16.59■□□□□ 0.25
C3orf38-201ENST00000318887 GLI2P10070 1586 aa16.58■□□□□ 0.24
C3orf38-201ENST00000318887 SAMD9LQ8IVG5 1584 aa16.58■□□□□ 0.24
C3orf38-201ENST00000318887 ANKRD30BQ9BXX2 1392 aa16.57■□□□□ 0.24
C3orf38-201ENST00000318887 RRP7BPQ9NSQ0 103 aa16.57■□□□□ 0.24
C3orf38-201ENST00000318887 ITSN2Q9NZM3 1697 aa16.57■□□□□ 0.24
C3orf38-201ENST00000318887 USP47Q96K76 1375 aa16.57■□□□□ 0.24
C3orf38-201ENST00000318887 ARHGEF12Q9NZN5 1544 aa16.57■□□□□ 0.24
C3orf38-201ENST00000318887 BCORL1Q5H9F3 1711 aa16.57■□□□□ 0.24
C3orf38-201ENST00000318887 TRIM44Q96DX7 344 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms