RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 CFAP70Q5T0N1 1121 aa17.18■□□□□ 0.34
NBPF3-201ENST00000318220 CHMP3Q9Y3E7 222 aa17.18■□□□□ 0.34
NBPF3-201ENST00000318220 EVC2Q86UK5 1308 aa17.17■□□□□ 0.34
NBPF3-201ENST00000318220 G3V3G9 751 aa17.17■□□□□ 0.34
NBPF3-201ENST00000318220 DCAF8Q5TAQ9 597 aa17.17■□□□□ 0.34
NBPF3-201ENST00000318220 EIF3AQ14152 1382 aaKnown RBP17.17■□□□□ 0.34
NBPF3-201ENST00000318220 FBXO31Q5XUX0 539 aaPredicted RBP17.17■□□□□ 0.34
NBPF3-201ENST00000318220 UBAP1LF5GYI3 381 aa17.16■□□□□ 0.34
NBPF3-201ENST00000318220 TULP1O00294 542 aaPredicted RBP17.16■□□□□ 0.34
NBPF3-201ENST00000318220 ADAMTS2O95450 1211 aa17.16■□□□□ 0.34
NBPF3-201ENST00000318220 ABTB2Q8N961 1025 aa17.15■□□□□ 0.34
NBPF3-201ENST00000318220 UPF2Q9HAU5 1272 aaKnown RBP17.15■□□□□ 0.34
NBPF3-201ENST00000318220 APBB1O00213 710 aa17.14■□□□□ 0.34
NBPF3-201ENST00000318220 CABP2Q9NPB3 220 aa17.14■□□□□ 0.33
NBPF3-201ENST00000318220 KIAA0586Q9BVV6 1533 aa17.14■□□□□ 0.33
NBPF3-201ENST00000318220 DCAF8L1A6NGE4 600 aa17.13■□□□□ 0.33
NBPF3-201ENST00000318220 URB2Q14146 1524 aaKnown RBP17.13■□□□□ 0.33
NBPF3-201ENST00000318220 ANKRD50Q9ULJ7 1429 aa17.13■□□□□ 0.33
NBPF3-201ENST00000318220 DNMBPQ6XZF7 1577 aa17.13■□□□□ 0.33
NBPF3-201ENST00000318220 ELL2O00472 640 aaPredicted RBP17.12■□□□□ 0.33
NBPF3-201ENST00000318220 TEFQ10587 303 aa17.12■□□□□ 0.33
NBPF3-201ENST00000318220 C1orf141Q5JVX7 400 aa17.12■□□□□ 0.33
NBPF3-201ENST00000318220 RAPGEF4Q8WZA2 1011 aa17.12■□□□□ 0.33
NBPF3-201ENST00000318220 PLB1Q6P1J6 1458 aa17.11■□□□□ 0.33
NBPF3-201ENST00000318220 PRDM11Q9NQV5 511 aa17.1■□□□□ 0.33
NBPF3-201ENST00000318220 SYNJ1O43426 1573 aa17.1■□□□□ 0.33
NBPF3-201ENST00000318220 RTL5Q5HYW3 569 aaPredicted RBP17.1■□□□□ 0.33
NBPF3-201ENST00000318220 DHX57Q6P158 1386 aaKnown RBP17.09■□□□□ 0.33
NBPF3-201ENST00000318220 PRAM1Q96QH2 718 aa17.09■□□□□ 0.33
NBPF3-201ENST00000318220 SLC52A1Q9NWF4 448 aa17.09■□□□□ 0.33
NBPF3-201ENST00000318220 TAF7LQ5H9L4 462 aa17.08■□□□□ 0.33
NBPF3-201ENST00000318220 CCDC146Q8IYE0 955 aa17.08■□□□□ 0.32
NBPF3-201ENST00000318220 PANK3Q9H999 370 aa17.07■□□□□ 0.32
NBPF3-201ENST00000318220 GGNBP2Q9H3C7 697 aa17.07■□□□□ 0.32
NBPF3-201ENST00000318220 DMRT2Q9Y5R5 561 aa17.07■□□□□ 0.32
NBPF3-201ENST00000318220 CENPJQ9HC77 1338 aaPredicted RBP17.07■□□□□ 0.32
NBPF3-201ENST00000318220 GPRASP1Q5JY77 1395 aa17.07■□□□□ 0.32
NBPF3-201ENST00000318220 TIMELESSQ9UNS1 1208 aa17.07■□□□□ 0.32
NBPF3-201ENST00000318220 RRP7AQ9Y3A4 280 aaKnown RBP17.07■□□□□ 0.32
NBPF3-201ENST00000318220 GRIN2AQ12879 1464 aa17.07■□□□□ 0.32
NBPF3-201ENST00000318220 ZC3H6P61129 1189 aaKnown RBP17.07■□□□□ 0.32
NBPF3-201ENST00000318220 STK31Q9BXU1 1019 aa17.07■□□□□ 0.32
NBPF3-201ENST00000318220 PPP6R1Q9UPN7 881 aa17.07■□□□□ 0.32
NBPF3-201ENST00000318220 PHLDB1Q86UU1 1377 aa17.06■□□□□ 0.32
NBPF3-201ENST00000318220 SLC4A10Q6U841 1118 aa17.06■□□□□ 0.32
NBPF3-201ENST00000318220 NGLY1Q96IV0 654 aa17.06■□□□□ 0.32
NBPF3-201ENST00000318220 FRAT2O75474 233 aaPredicted RBP17.05■□□□□ 0.32
NBPF3-201ENST00000318220 TTC5Q8N0Z6 440 aa17.05■□□□□ 0.32
NBPF3-201ENST00000318220 KTN1Q86UP2 1357 aaKnown RBP17.05■□□□□ 0.32
NBPF3-201ENST00000318220 FOXO3O43524 673 aa17.04■□□□□ 0.32
NBPF3-201ENST00000318220 TROQ12816 1431 aaPredicted RBP17.04■□□□□ 0.32
NBPF3-201ENST00000318220 TOM1L2Q6ZVM7 507 aa17.03■□□□□ 0.32
NBPF3-201ENST00000318220 DDX54Q8TDD1 881 aaKnown RBP17.03■□□□□ 0.32
NBPF3-201ENST00000318220 MAGI1Q96QZ7 1491 aaPredicted RBP17.02■□□□□ 0.32
NBPF3-201ENST00000318220 EIF2S2P20042 333 aaKnown RBP17.02■□□□□ 0.32
NBPF3-201ENST00000318220 NECTIN2Q92692 538 aa17.02■□□□□ 0.32
NBPF3-201ENST00000318220 FGD6Q6ZV73 1430 aa17.02■□□□□ 0.31
NBPF3-201ENST00000318220 NCOA2Q15596 1464 aa17.01■□□□□ 0.31
NBPF3-201ENST00000318220 NAP1L2Q9ULW6 460 aaPredicted RBP17■□□□□ 0.31
NBPF3-201ENST00000318220 PDE3BQ13370 1112 aa17■□□□□ 0.31
NBPF3-201ENST00000318220 KCNJ4P48050 445 aa17■□□□□ 0.31
NBPF3-201ENST00000318220 GORABQ5T7V8 394 aa17■□□□□ 0.31
NBPF3-201ENST00000318220 CGNL1Q0VF96 1302 aa17■□□□□ 0.31
NBPF3-201ENST00000318220 ABCA10Q8WWZ4 1543 aa16.99■□□□□ 0.31
NBPF3-201ENST00000318220 FGD1P98174 961 aa16.98■□□□□ 0.31
NBPF3-201ENST00000318220 CASKIN1Q8WXD9 1431 aa16.98■□□□□ 0.31
NBPF3-201ENST00000318220 ARHGEF11O15085 1522 aa16.98■□□□□ 0.31
NBPF3-201ENST00000318220 FAM177BA6PVY3 158 aa16.97■□□□□ 0.31
NBPF3-201ENST00000318220 TOM1O60784 492 aa16.97■□□□□ 0.31
NBPF3-201ENST00000318220 HMOX1P09601 288 aa16.97■□□□□ 0.31
NBPF3-201ENST00000318220 IDI1Q13907 227 aa16.97■□□□□ 0.31
NBPF3-201ENST00000318220 ARAP1Q96P48 1450 aa16.96■□□□□ 0.31
NBPF3-201ENST00000318220 RGS3P49796 1198 aa16.96■□□□□ 0.31
NBPF3-201ENST00000318220 WAPLQ7Z5K2 1190 aa16.95■□□□□ 0.3
NBPF3-201ENST00000318220 RBM42Q9BTD8 480 aaKnown RBP16.95■□□□□ 0.3
NBPF3-201ENST00000318220 ADGRL1O94910 1474 aa16.95■□□□□ 0.3
NBPF3-201ENST00000318220 TCERG1O14776 1098 aaKnown RBP16.95■□□□□ 0.3
NBPF3-201ENST00000318220 TPRNQ4KMQ1 711 aa16.95■□□□□ 0.3
NBPF3-201ENST00000318220 CLUAP1Q96AJ1 413 aa16.95■□□□□ 0.3
NBPF3-201ENST00000318220 CDK13Q14004 1512 aaKnown RBP16.94■□□□□ 0.3
NBPF3-201ENST00000318220 CALD1Q05682 793 aaKnown RBP16.94■□□□□ 0.3
NBPF3-201ENST00000318220 DNAJC5Q9H3Z4 198 aa16.94■□□□□ 0.3
NBPF3-201ENST00000318220 C9orf84Q5VXU9 1444 aa16.94■□□□□ 0.3
NBPF3-201ENST00000318220 ANP32AP39687 249 aaKnown RBP16.93■□□□□ 0.3
NBPF3-201ENST00000318220 AMOTL2Q9Y2J4 779 aa16.93■□□□□ 0.3
NBPF3-201ENST00000318220 NBPF1Q3BBV0 1214 aa16.93■□□□□ 0.3
NBPF3-201ENST00000318220 NLRP13Q86W25 1043 aa16.93■□□□□ 0.3
NBPF3-201ENST00000318220 CABP1Q9NZU7 370 aa16.93■□□□□ 0.3
NBPF3-201ENST00000318220 SUPT16HQ9Y5B9 1047 aaKnown RBP16.93■□□□□ 0.3
NBPF3-201ENST00000318220 DENND4BO75064 1496 aaPredicted RBP16.91■□□□□ 0.3
NBPF3-201ENST00000318220 SLC12A5Q9H2X9 1139 aa16.9■□□□□ 0.3
NBPF3-201ENST00000318220 ASXL2Q76L83 1435 aa16.89■□□□□ 0.29
NBPF3-201ENST00000318220 CDK19Q9BWU1 502 aa16.89■□□□□ 0.29
NBPF3-201ENST00000318220 CHMP4AQ9BY43 222 aa16.89■□□□□ 0.29
NBPF3-201ENST00000318220 LRRC9Q6ZRR7 1453 aa16.89■□□□□ 0.29
NBPF3-201ENST00000318220 PRXQ9BXM0 1461 aa16.89■□□□□ 0.29
NBPF3-201ENST00000318220 DIAPH1O60610 1272 aaKnown RBP16.89■□□□□ 0.29
NBPF3-201ENST00000318220 TOP2BQ02880 1626 aa16.87■□□□□ 0.29
NBPF3-201ENST00000318220 FBXW7Q969H0 707 aa16.87■□□□□ 0.29
NBPF3-201ENST00000318220 SMC4Q9NTJ3 1288 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms