RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 SPAG9O60271 1321 aaKnown RBP9.76□□□□□ -0.85
CDHR3-201ENST00000317716 ASXL2Q76L83 1435 aa9.76□□□□□ -0.85
CDHR3-201ENST00000317716 RRP1P56182 461 aaKnown RBP9.76□□□□□ -0.85
CDHR3-201ENST00000317716 LRRC9Q6ZRR7 1453 aa9.76□□□□□ -0.85
CDHR3-201ENST00000317716 NCOA2Q15596 1464 aa9.75□□□□□ -0.85
CDHR3-201ENST00000317716 STAG3Q9UJ98 1225 aa9.75□□□□□ -0.85
CDHR3-201ENST00000317716 UGGT2Q9NYU1 1516 aa9.75□□□□□ -0.85
CDHR3-201ENST00000317716 AMER1Q5JTC6 1135 aaPredicted RBP9.75□□□□□ -0.85
CDHR3-201ENST00000317716 DCAF11Q8TEB1 546 aa9.75□□□□□ -0.85
CDHR3-201ENST00000317716 CDCA7LQ96GN5 454 aa9.74□□□□□ -0.85
CDHR3-201ENST00000317716 FYCO1Q9BQS8 1478 aa9.74□□□□□ -0.85
CDHR3-201ENST00000317716 ARHGAP5Q13017 1502 aa9.73□□□□□ -0.85
CDHR3-201ENST00000317716 USP35Q9P2H5 1018 aa9.73□□□□□ -0.85
CDHR3-201ENST00000317716 C11orf95C9JLR9 678 aaPredicted RBP9.72□□□□□ -0.85
CDHR3-201ENST00000317716 CD109Q6YHK3 1445 aa9.72□□□□□ -0.85
CDHR3-201ENST00000317716 TROQ12816 1431 aaPredicted RBP9.72□□□□□ -0.85
CDHR3-201ENST00000317716 NUTM2DQ5VT03 806 aaPredicted RBP9.72□□□□□ -0.85
CDHR3-201ENST00000317716 FOXD4L1Q9NU39 408 aa9.72□□□□□ -0.85
CDHR3-201ENST00000317716 RAPGEF6Q8TEU7 1601 aa9.71□□□□□ -0.85
CDHR3-201ENST00000317716 HSP90AA2PQ14568 343 aaPredicted RBP9.71□□□□□ -0.85
CDHR3-201ENST00000317716 KIF7Q2M1P5 1343 aa9.71□□□□□ -0.86
CDHR3-201ENST00000317716 HECW1Q76N89 1606 aa9.71□□□□□ -0.86
CDHR3-201ENST00000317716 CCDC146Q8IYE0 955 aa9.71□□□□□ -0.86
CDHR3-201ENST00000317716 SCAPERQ9BY12 1400 aa9.7□□□□□ -0.86
CDHR3-201ENST00000317716 TSPOAP1O95153 1857 aa9.7□□□□□ -0.86
CDHR3-201ENST00000317716 CLUAP1Q96AJ1 413 aa9.7□□□□□ -0.86
CDHR3-201ENST00000317716 RSPH6AQ9H0K4 717 aa9.69□□□□□ -0.86
CDHR3-201ENST00000317716 TIAM1Q13009 1591 aa9.69□□□□□ -0.86
CDHR3-201ENST00000317716 RIMBP3CA6NJZ7 1639 aa9.69□□□□□ -0.86
CDHR3-201ENST00000317716 RIMBP3BA6NNM3 1639 aa9.69□□□□□ -0.86
CDHR3-201ENST00000317716 RIMBP3Q9UFD9 1639 aa9.69□□□□□ -0.86
CDHR3-201ENST00000317716 PKD2Q13563 968 aa9.69□□□□□ -0.86
CDHR3-201ENST00000317716 PKNOX2Q96KN3 472 aa9.69□□□□□ -0.86
CDHR3-201ENST00000317716 ST20-MTHFSA0A0A6YYL1 179 aa9.68□□□□□ -0.86
CDHR3-201ENST00000317716 KNSTRNQ9Y448 316 aa9.68□□□□□ -0.86
CDHR3-201ENST00000317716 CCDC7Q96M83 1385 aa9.68□□□□□ -0.86
CDHR3-201ENST00000317716 L1TD1Q5T7N2 865 aaKnown RBP9.68□□□□□ -0.86
CDHR3-201ENST00000317716 FGD6Q6ZV73 1430 aa9.68□□□□□ -0.86
CDHR3-201ENST00000317716 GOLGA6L3A6NEY3 463 aa9.67□□□□□ -0.86
CDHR3-201ENST00000317716 SLC24A1O60721 1099 aa9.67□□□□□ -0.86
CDHR3-201ENST00000317716 MYOM3Q5VTT5 1437 aa9.67□□□□□ -0.86
CDHR3-201ENST00000317716 PLEKHG5O94827 1062 aa9.67□□□□□ -0.86
CDHR3-201ENST00000317716 BACH2Q9BYV9 841 aa9.67□□□□□ -0.86
CDHR3-201ENST00000317716 ABCC2Q92887 1545 aa9.67□□□□□ -0.86
CDHR3-201ENST00000317716 BCL2L13Q9BXK5 485 aa9.67□□□□□ -0.86
CDHR3-201ENST00000317716 CLASP1Q7Z460 1538 aa9.66□□□□□ -0.86
CDHR3-201ENST00000317716 MFAP1P55081 439 aaKnown RBP9.66□□□□□ -0.86
CDHR3-201ENST00000317716 DNTTIP2Q5QJE6 756 aaKnown RBP9.66□□□□□ -0.86
CDHR3-201ENST00000317716 FAM161AQ3B820 660 aa9.65□□□□□ -0.86
CDHR3-201ENST00000317716 NBPF8Q3BBV2 869 aa9.65□□□□□ -0.86
CDHR3-201ENST00000317716 WASHC2CQ9Y4E1 1318 aa9.65□□□□□ -0.86
CDHR3-201ENST00000317716 NUP155O75694 1391 aa9.65□□□□□ -0.86
CDHR3-201ENST00000317716 SAMD9Q5K651 1589 aa9.65□□□□□ -0.86
CDHR3-201ENST00000317716 CNTLNQ9NXG0 1405 aa9.65□□□□□ -0.87
CDHR3-201ENST00000317716 HSP90AB1P08238 724 aaKnown RBP9.64□□□□□ -0.87
CDHR3-201ENST00000317716 RRBP1Q9P2E9 1410 aaKnown RBP9.64□□□□□ -0.87
CDHR3-201ENST00000317716 MAGI3Q5TCQ9 1506 aa9.64□□□□□ -0.87
CDHR3-201ENST00000317716 PTMAP06454 111 aaKnown RBP9.64□□□□□ -0.87
CDHR3-201ENST00000317716 CEBPAP49715 358 aaPredicted RBP9.64□□□□□ -0.87
CDHR3-201ENST00000317716 FTSJ3Q8IY81 847 aaKnown RBP9.64□□□□□ -0.87
CDHR3-201ENST00000317716 POGKQ9P215 609 aa9.64□□□□□ -0.87
CDHR3-201ENST00000317716 WDR7Q9Y4E6 1490 aa9.64□□□□□ -0.87
CDHR3-201ENST00000317716 PLCB2Q00722 1185 aa9.63□□□□□ -0.87
CDHR3-201ENST00000317716 KIF14Q15058 1648 aa9.62□□□□□ -0.87
CDHR3-201ENST00000317716 FANCAO15360 1455 aa9.62□□□□□ -0.87
CDHR3-201ENST00000317716 A0A0U1RQG5 324 aaPredicted RBP9.62□□□□□ -0.87
CDHR3-201ENST00000317716 NLRP13Q86W25 1043 aa9.62□□□□□ -0.87
CDHR3-201ENST00000317716 MYH16Q9H6N6 1097 aa9.62□□□□□ -0.87
CDHR3-201ENST00000317716 KTN1Q86UP2 1357 aaKnown RBP9.62□□□□□ -0.87
CDHR3-201ENST00000317716 ANKRD30AQ9BXX3 1397 aa9.62□□□□□ -0.87
CDHR3-201ENST00000317716 COG6Q9Y2V7 657 aa9.62□□□□□ -0.87
CDHR3-201ENST00000317716 RRP7AQ9Y3A4 280 aaKnown RBP9.61□□□□□ -0.87
CDHR3-201ENST00000317716 MS4A1P11836 297 aa9.61□□□□□ -0.87
CDHR3-201ENST00000317716 SAFB2Q14151 953 aaKnown RBP eCLIP9.61□□□□□ -0.87
CDHR3-201ENST00000317716 C20orf194Q5TEA3 1177 aa9.61□□□□□ -0.87
CDHR3-201ENST00000317716 HSCBQ8IWL3 235 aa9.61□□□□□ -0.87
CDHR3-201ENST00000317716 KIF15Q9NS87 1388 aa9.61□□□□□ -0.87
CDHR3-201ENST00000317716 ADGRL1O94910 1474 aa9.61□□□□□ -0.87
CDHR3-201ENST00000317716 EHBP1L1Q8N3D4 1523 aa9.61□□□□□ -0.87
CDHR3-201ENST00000317716 GPATCH8Q9UKJ3 1502 aaKnown RBP9.6□□□□□ -0.87
CDHR3-201ENST00000317716 USP47Q96K76 1375 aa9.6□□□□□ -0.87
CDHR3-201ENST00000317716 SUPT6HQ7KZ85 1726 aaKnown RBP9.59□□□□□ -0.87
CDHR3-201ENST00000317716 MSNP26038 577 aaKnown RBP9.59□□□□□ -0.87
CDHR3-201ENST00000317716 MYBBP1AQ9BQG0 1328 aaKnown RBP9.59□□□□□ -0.87
CDHR3-201ENST00000317716 GOLGA6L22H0YM25 854 aa9.59□□□□□ -0.87
CDHR3-201ENST00000317716 ADCY10Q96PN6 1610 aa9.59□□□□□ -0.87
CDHR3-201ENST00000317716 RALBP1Q15311 655 aa9.59□□□□□ -0.87
CDHR3-201ENST00000317716 UBE2Q2Q8WVN8 375 aa9.59□□□□□ -0.87
CDHR3-201ENST00000317716 GOLGA2Q08379 1002 aa9.58□□□□□ -0.88
CDHR3-201ENST00000317716 CENPQQ7L2Z9 268 aaPredicted RBP9.58□□□□□ -0.88
CDHR3-201ENST00000317716 PNISRQ8TF01 805 aaKnown RBP9.58□□□□□ -0.88
CDHR3-201ENST00000317716 TRAPPC8Q9Y2L5 1435 aa9.58□□□□□ -0.88
CDHR3-201ENST00000317716 ABCA8O94911 1581 aa9.58□□□□□ -0.88
CDHR3-201ENST00000317716 FOXD4L5Q5VV16 416 aaPredicted RBP9.58□□□□□ -0.88
CDHR3-201ENST00000317716 FOXD4L4Q8WXT5 416 aaPredicted RBP9.58□□□□□ -0.88
CDHR3-201ENST00000317716 PANK3Q9H999 370 aa9.58□□□□□ -0.88
CDHR3-201ENST00000317716 FAM13BQ9NYF5 915 aa9.58□□□□□ -0.88
CDHR3-201ENST00000317716 ZCCHC11Q5TAX3 1644 aaKnown RBP9.57□□□□□ -0.88
CDHR3-201ENST00000317716 APBB1O00213 710 aa9.57□□□□□ -0.88
CDHR3-201ENST00000317716 RBM10P98175 930 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms