RNA–Protein interactions for RNA: ENST00000317623.8

PCNX4-201, Transcript of pecanex 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCNX4, Length 17,339 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-201ENST00000317623 MCTP1Q6DN14 999 aa8.09□□□□□ -1.11
PCNX4-201ENST00000317623 TSPYL1Q9H0U9 437 aa8.09□□□□□ -1.11
PCNX4-201ENST00000317623 TPD52L1Q16890 204 aaPredicted RBP8.09□□□□□ -1.11
PCNX4-201ENST00000317623 HSP90B1P14625 803 aaKnown RBP8.09□□□□□ -1.11
PCNX4-201ENST00000317623 STK11IPQ8N1F8 1099 aa8.09□□□□□ -1.11
PCNX4-201ENST00000317623 TRIM6-TRIM34B2RNG4 842 aa8.09□□□□□ -1.11
PCNX4-201ENST00000317623 FOXD4L6Q3SYB3 417 aaPredicted RBP8.09□□□□□ -1.11
PCNX4-201ENST00000317623 FOXD4L3Q6VB84 417 aaPredicted RBP8.09□□□□□ -1.11
PCNX4-201ENST00000317623 PABPN1Q86U42 306 aaKnown RBP eCLIP8.09□□□□□ -1.11
PCNX4-201ENST00000317623 ESPNB1AK53 854 aa8.09□□□□□ -1.11
PCNX4-201ENST00000317623 H3BQV1 296 aa8.09□□□□□ -1.12
PCNX4-201ENST00000317623 IFFO2Q5TF58 517 aa8.09□□□□□ -1.12
PCNX4-201ENST00000317623 CCNB3Q8WWL7 1395 aa8.08□□□□□ -1.12
PCNX4-201ENST00000317623 TNIKQ9UKE5 1360 aa8.08□□□□□ -1.12
PCNX4-201ENST00000317623 CENPJQ9HC77 1338 aaPredicted RBP8.08□□□□□ -1.12
PCNX4-201ENST00000317623 ISY1Q9ULR0 285 aaKnown RBP8.08□□□□□ -1.12
PCNX4-201ENST00000317623 RUFY1Q96T51 708 aa8.08□□□□□ -1.12
PCNX4-201ENST00000317623 HAP1P54257 671 aaPredicted RBP8.07□□□□□ -1.12
PCNX4-201ENST00000317623 PLIN1O60240 522 aa8.07□□□□□ -1.12
PCNX4-201ENST00000317623 ERCC4Q92889 916 aaPredicted RBP8.07□□□□□ -1.12
PCNX4-201ENST00000317623 USP8P40818 1118 aa8.07□□□□□ -1.12
PCNX4-201ENST00000317623 LETM1O95202 739 aaPredicted RBP8.07□□□□□ -1.12
PCNX4-201ENST00000317623 HMMRO75330 724 aa8.07□□□□□ -1.12
PCNX4-201ENST00000317623 TSPY26PQ9H489 355 aa8.07□□□□□ -1.12
PCNX4-201ENST00000317623 PRDM10Q9NQV6 1147 aa8.07□□□□□ -1.12
PCNX4-201ENST00000317623 BCL11BQ9C0K0 894 aaPredicted RBP8.07□□□□□ -1.12
PCNX4-201ENST00000317623 SMC4Q9NTJ3 1288 aa8.07□□□□□ -1.12
PCNX4-201ENST00000317623 CLSTN1O94985 981 aa8.06□□□□□ -1.12
PCNX4-201ENST00000317623 KIF3AQ9Y496 699 aa8.06□□□□□ -1.12
PCNX4-201ENST00000317623 DCTN1Q14203 1278 aa8.06□□□□□ -1.12
PCNX4-201ENST00000317623 SETD5Q9C0A6 1442 aa8.06□□□□□ -1.12
PCNX4-201ENST00000317623 ERICH4A6NGS2 130 aa8.06□□□□□ -1.12
PCNX4-201ENST00000317623 CDR1P51861 262 aa8.06□□□□□ -1.12
PCNX4-201ENST00000317623 BBXQ8WY36 941 aaPredicted RBP8.06□□□□□ -1.12
PCNX4-201ENST00000317623 PLCD4Q9BRC7 762 aa8.06□□□□□ -1.12
PCNX4-201ENST00000317623 REC8O95072 547 aa8.05□□□□□ -1.12
PCNX4-201ENST00000317623 ZHX1Q9UKY1 873 aaPredicted RBP8.05□□□□□ -1.12
PCNX4-201ENST00000317623 CALCOCO1Q9P1Z2 691 aa8.05□□□□□ -1.12
PCNX4-201ENST00000317623 PES1O00541 588 aaKnown RBP8.05□□□□□ -1.12
PCNX4-201ENST00000317623 ANKRD45Q5TZF3 282 aa8.05□□□□□ -1.12
PCNX4-201ENST00000317623 GRPEL1Q9HAV7 217 aa8.05□□□□□ -1.12
PCNX4-201ENST00000317623 RNF214Q8ND24 703 aa8.05□□□□□ -1.12
PCNX4-201ENST00000317623 GOLGA3Q08378 1498 aa8.05□□□□□ -1.12
PCNX4-201ENST00000317623 C22orf23Q9BZE7 217 aa8.05□□□□□ -1.12
PCNX4-201ENST00000317623 PPP1R15AO75807 674 aaPredicted RBP8.05□□□□□ -1.12
PCNX4-201ENST00000317623 KIAA0754O94854 1291 aa8.04□□□□□ -1.12
PCNX4-201ENST00000317623 CHMP4CQ96CF2 233 aa8.04□□□□□ -1.12
PCNX4-201ENST00000317623 PHLDB1Q86UU1 1377 aa8.04□□□□□ -1.12
PCNX4-201ENST00000317623 CHMP3Q9Y3E7 222 aa8.04□□□□□ -1.12
PCNX4-201ENST00000317623 PDCL2Q8N4E4 241 aa8.04□□□□□ -1.12
PCNX4-201ENST00000317623 IPO7O95373 1038 aaKnown RBP8.04□□□□□ -1.12
PCNX4-201ENST00000317623 NLRP13Q86W25 1043 aa8.04□□□□□ -1.12
PCNX4-201ENST00000317623 NAT10Q9H0A0 1025 aaKnown RBP8.04□□□□□ -1.12
PCNX4-201ENST00000317623 C14orf37Q86TY3 774 aa8.04□□□□□ -1.12
PCNX4-201ENST00000317623 SASS6Q6UVJ0 657 aa8.04□□□□□ -1.12
PCNX4-201ENST00000317623 CAVIN1Q6NZI2 390 aaKnown RBP8.04□□□□□ -1.12
PCNX4-201ENST00000317623 CCP110O43303 1012 aa8.04□□□□□ -1.12
PCNX4-201ENST00000317623 CEP89Q96ST8 783 aa8.03□□□□□ -1.12
PCNX4-201ENST00000317623 DCAF11Q8TEB1 546 aa8.03□□□□□ -1.12
PCNX4-201ENST00000317623 CLUAP1Q96AJ1 413 aa8.03□□□□□ -1.12
PCNX4-201ENST00000317623 ZCCHC6Q5VYS8 1495 aaKnown RBP8.03□□□□□ -1.12
PCNX4-201ENST00000317623 U2AF1L5P0DN76 240 aaPredicted RBP8.03□□□□□ -1.12
PCNX4-201ENST00000317623 U2AF1Q01081 240 aaKnown RBP eCLIP8.03□□□□□ -1.12
PCNX4-201ENST00000317623 HOOK1Q9UJC3 728 aaKnown RBP8.03□□□□□ -1.12
PCNX4-201ENST00000317623 IRX3P78415 501 aaPredicted RBP8.02□□□□□ -1.12
PCNX4-201ENST00000317623 GORABQ5T7V8 394 aa8.02□□□□□ -1.13
PCNX4-201ENST00000317623 DYDC1Q8WWB3 177 aa8.02□□□□□ -1.13
PCNX4-201ENST00000317623 NPHP1O15259 732 aa8.02□□□□□ -1.13
PCNX4-201ENST00000317623 AEBP1Q8IUX7 1158 aa8.02□□□□□ -1.13
PCNX4-201ENST00000317623 GPATCH11Q8N954 259 aa8.02□□□□□ -1.13
PCNX4-201ENST00000317623 CGNQ9P2M7 1197 aaKnown RBP8.02□□□□□ -1.13
PCNX4-201ENST00000317623 SENP3Q9H4L4 574 aaPredicted RBP8.02□□□□□ -1.13
PCNX4-201ENST00000317623 ANKRD20A12PQ8NF67 263 aa8.02□□□□□ -1.13
PCNX4-201ENST00000317623 TIGD1Q96MW7 591 aa8.02□□□□□ -1.13
PCNX4-201ENST00000317623 FAM184AQ8NB25 1140 aa8.02□□□□□ -1.13
PCNX4-201ENST00000317623 CCDC112Q8NEF3 446 aa8.02□□□□□ -1.13
PCNX4-201ENST00000317623 CBX1P83916 185 aa8.01□□□□□ -1.13
PCNX4-201ENST00000317623 TRIM5Q9C035 493 aa8.01□□□□□ -1.13
PCNX4-201ENST00000317623 MSH5O43196 834 aa8.01□□□□□ -1.13
PCNX4-201ENST00000317623 GIMAP7Q8NHV1 300 aa8.01□□□□□ -1.13
PCNX4-201ENST00000317623 RASSF8Q8NHQ8 419 aa8.01□□□□□ -1.13
PCNX4-201ENST00000317623 MBD3O95983 291 aa8.01□□□□□ -1.13
PCNX4-201ENST00000317623 ZRSR2Q15696 482 aaKnown RBP8.01□□□□□ -1.13
PCNX4-201ENST00000317623 SKIDA1Q1XH10 827 aa8.01□□□□□ -1.13
PCNX4-201ENST00000317623 NCBP3Q53F19 620 aaKnown RBP8.01□□□□□ -1.13
PCNX4-201ENST00000317623 CCDC146Q8IYE0 955 aa8.01□□□□□ -1.13
PCNX4-201ENST00000317623 FBXW7Q969H0 707 aa8.01□□□□□ -1.13
PCNX4-201ENST00000317623 A0A0G2JS52 829 aa8□□□□□ -1.13
PCNX4-201ENST00000317623 CGNL1Q0VF96 1302 aa8□□□□□ -1.13
PCNX4-201ENST00000317623 RTF1Q92541 710 aaKnown RBP8□□□□□ -1.13
PCNX4-201ENST00000317623 INCENPQ9NQS7 918 aa8□□□□□ -1.13
PCNX4-201ENST00000317623 ZSCAN30Q86W11 494 aa8□□□□□ -1.13
PCNX4-201ENST00000317623 CAGE1Q8TC20 777 aa8□□□□□ -1.13
PCNX4-201ENST00000317623 CT47B1P0C2W7 299 aaPredicted RBP8□□□□□ -1.13
PCNX4-201ENST00000317623 POGKQ9P215 609 aa8□□□□□ -1.13
PCNX4-201ENST00000317623 GTF2A1P52655 376 aaPredicted RBP8□□□□□ -1.13
PCNX4-201ENST00000317623 E9PSI1 815 aa8□□□□□ -1.13
PCNX4-201ENST00000317623 AXDND1Q5T1B0 1012 aaPredicted RBP7.99□□□□□ -1.13
PCNX4-201ENST00000317623 BICD2Q8TD16 824 aa7.99□□□□□ -1.13
PCNX4-201ENST00000317623 IPO4Q8TEX9 1081 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms