RNA–Protein interactions for RNA: ENST00000316485.11

PATJ-202, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 5 BASIC

Gene PATJ, Length 3,657 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-202ENST00000316485 RTEL1-TNFRSF6BF6WH68 1400 aa6.34□□□□□ -1.39
PATJ-202ENST00000316485 ZFYVE16Q7Z3T8 1539 aa6.34□□□□□ -1.39
PATJ-202ENST00000316485 PLXNC1O60486 1568 aa6.34□□□□□ -1.4
PATJ-202ENST00000316485 FAM135AQ9P2D6 1515 aa6.33□□□□□ -1.4
PATJ-202ENST00000316485 KANK1Q14678 1352 aa6.33□□□□□ -1.4
PATJ-202ENST00000316485 ERBINQ96RT1 1412 aa6.33□□□□□ -1.4
PATJ-202ENST00000316485 TRHP20396 242 aaPredicted RBP6.33□□□□□ -1.4
PATJ-202ENST00000316485 CFAP74Q9C0B2 1584 aa6.33□□□□□ -1.4
PATJ-202ENST00000316485 POGZQ7Z3K3 1410 aa6.33□□□□□ -1.4
PATJ-202ENST00000316485 RPRD2Q5VT52 1461 aaKnown RBP6.32□□□□□ -1.4
PATJ-202ENST00000316485 DCAF11Q8TEB1 546 aa6.32□□□□□ -1.4
PATJ-202ENST00000316485 NEO1Q92859 1461 aa6.32□□□□□ -1.4
PATJ-202ENST00000316485 DHX29Q7Z478 1369 aaKnown RBP6.32□□□□□ -1.4
PATJ-202ENST00000316485 CCDC144AA2RUR9 1427 aa6.31□□□□□ -1.4
PATJ-202ENST00000316485 NBPF8Q3BBV2 869 aa6.31□□□□□ -1.4
PATJ-202ENST00000316485 DIP2BQ9P265 1576 aa6.31□□□□□ -1.4
PATJ-202ENST00000316485 A2MP01023 1474 aa6.31□□□□□ -1.4
PATJ-202ENST00000316485 INO80Q9ULG1 1556 aaPredicted RBP6.31□□□□□ -1.4
PATJ-202ENST00000316485 CHGAP10645 457 aaKnown RBP6.3□□□□□ -1.4
PATJ-202ENST00000316485 DDX10Q13206 875 aaKnown RBP6.3□□□□□ -1.4
PATJ-202ENST00000316485 KDM5DQ9BY66 1539 aa6.3□□□□□ -1.4
PATJ-202ENST00000316485 MLECQ14165 292 aa6.3□□□□□ -1.4
PATJ-202ENST00000316485 MAP3K4Q9Y6R4 1608 aa6.3□□□□□ -1.4
PATJ-202ENST00000316485 KIDINS220Q9ULH0 1771 aa6.3□□□□□ -1.4
PATJ-202ENST00000316485 POLR3GLQ9BT43 218 aa6.3□□□□□ -1.4
PATJ-202ENST00000316485 UNC13BO14795 1591 aa6.3□□□□□ -1.4
PATJ-202ENST00000316485 WASHC2CQ9Y4E1 1318 aa6.3□□□□□ -1.4
PATJ-202ENST00000316485 EIF4G2P78344 907 aaKnown RBP eCLIP6.29□□□□□ -1.4
PATJ-202ENST00000316485 MIER1Q8N108 512 aa6.29□□□□□ -1.4
PATJ-202ENST00000316485 GLI2P10070 1586 aa6.29□□□□□ -1.4
PATJ-202ENST00000316485 HECW2Q9P2P5 1572 aa6.29□□□□□ -1.4
PATJ-202ENST00000316485 HSPA5P11021 654 aaKnown RBP6.29□□□□□ -1.4
PATJ-202ENST00000316485 YEATS2Q9ULM3 1422 aa6.29□□□□□ -1.4
PATJ-202ENST00000316485 SCAF1Q9H7N4 1312 aaKnown RBP6.29□□□□□ -1.4
PATJ-202ENST00000316485 TEX14Q8IWB6 1497 aa6.29□□□□□ -1.4
PATJ-202ENST00000316485 MLH3Q9UHC1 1453 aa6.28□□□□□ -1.4
PATJ-202ENST00000316485 IQGAP3Q86VI3 1631 aa6.28□□□□□ -1.4
PATJ-202ENST00000316485 KDM5CP41229 1560 aa6.27□□□□□ -1.41
PATJ-202ENST00000316485 ARID4BQ4LE39 1312 aaPredicted RBP6.27□□□□□ -1.41
PATJ-202ENST00000316485 YTHDC1Q96MU7 727 aaKnown RBP6.27□□□□□ -1.41
PATJ-202ENST00000316485 ABCA6Q8N139 1617 aa6.27□□□□□ -1.41
PATJ-202ENST00000316485 CARD11Q9BXL7 1154 aa6.27□□□□□ -1.41
PATJ-202ENST00000316485 PLA2R1Q13018 1463 aa6.26□□□□□ -1.41
PATJ-202ENST00000316485 CFAP65Q6ZU64 1925 aaKnown RBP6.26□□□□□ -1.41
PATJ-202ENST00000316485 MAGI2Q86UL8 1455 aa6.26□□□□□ -1.41
PATJ-202ENST00000316485 CACNB1Q02641 598 aaPredicted RBP6.26□□□□□ -1.41
PATJ-202ENST00000316485 RICTORQ6R327 1708 aa6.25□□□□□ -1.41
PATJ-202ENST00000316485 CNGB1Q14028 1251 aaPredicted RBP6.25□□□□□ -1.41
PATJ-202ENST00000316485 ESF1Q9H501 851 aaKnown RBP6.25□□□□□ -1.41
PATJ-202ENST00000316485 DIP2CQ9Y2E4 1556 aa6.25□□□□□ -1.41
PATJ-202ENST00000316485 E9PCH4 1651 aa6.25□□□□□ -1.41
PATJ-202ENST00000316485 ROCK2O75116 1388 aaKnown RBP6.24□□□□□ -1.41
PATJ-202ENST00000316485 ATP10AO60312 1499 aa6.24□□□□□ -1.41
PATJ-202ENST00000316485 KIF13AQ9H1H9 1805 aa6.24□□□□□ -1.41
PATJ-202ENST00000316485 FRMPD1Q5SYB0 1578 aa6.24□□□□□ -1.41
PATJ-202ENST00000316485 EIF2AK4Q9P2K8 1649 aaKnown RBP6.24□□□□□ -1.41
PATJ-202ENST00000316485 PPRC1Q5VV67 1664 aaKnown RBP6.24□□□□□ -1.41
PATJ-202ENST00000316485 CEP152O94986 1710 aa6.24□□□□□ -1.41
PATJ-202ENST00000316485 TET3O43151 1660 aa6.24□□□□□ -1.41
PATJ-202ENST00000316485 COL17A1Q9UMD9 1497 aaPredicted RBP6.23□□□□□ -1.41
PATJ-202ENST00000316485 DEPDC5O75140 1603 aa6.23□□□□□ -1.41
PATJ-202ENST00000316485 PRDM15P57071 1507 aaPredicted RBP6.23□□□□□ -1.41
PATJ-202ENST00000316485 NBPF1Q3BBV0 1214 aa6.23□□□□□ -1.41
PATJ-202ENST00000316485 NUTM2DQ5VT03 806 aaPredicted RBP6.23□□□□□ -1.41
PATJ-202ENST00000316485 MROH1Q8NDA8 1641 aa6.23□□□□□ -1.41
PATJ-202ENST00000316485 UGGT1Q9NYU2 1555 aa6.23□□□□□ -1.41
PATJ-202ENST00000316485 USP47Q96K76 1375 aa6.23□□□□□ -1.41
PATJ-202ENST00000316485 STAG3Q9UJ98 1225 aa6.22□□□□□ -1.41
PATJ-202ENST00000316485 NPATQ14207 1427 aa6.22□□□□□ -1.41
PATJ-202ENST00000316485 C11orf95C9JLR9 678 aaPredicted RBP6.22□□□□□ -1.41
PATJ-202ENST00000316485 FBXO31Q5XUX0 539 aaPredicted RBP6.22□□□□□ -1.41
PATJ-202ENST00000316485 DNAJC5Q9H3Z4 198 aa6.22□□□□□ -1.41
PATJ-202ENST00000316485 WASHC2AQ641Q2 1341 aa6.22□□□□□ -1.41
PATJ-202ENST00000316485 EFCAB6Q5THR3 1501 aa6.22□□□□□ -1.41
PATJ-202ENST00000316485 SPHKAPQ2M3C7 1700 aa6.22□□□□□ -1.41
PATJ-202ENST00000316485 VWDEQ8N2E2 1590 aa6.22□□□□□ -1.41
PATJ-202ENST00000316485 ST20-MTHFSA0A0A6YYL1 179 aa6.21□□□□□ -1.41
PATJ-202ENST00000316485 ANP32CO43423 234 aa6.21□□□□□ -1.41
PATJ-202ENST00000316485 TRPM2O94759 1503 aa6.21□□□□□ -1.41
PATJ-202ENST00000316485 CLTCL1P53675 1640 aa6.21□□□□□ -1.42
PATJ-202ENST00000316485 ABCC3O15438 1527 aa6.21□□□□□ -1.42
PATJ-202ENST00000316485 RNF17Q9BXT8 1623 aaKnown RBP6.21□□□□□ -1.42
PATJ-202ENST00000316485 PTPRTO14522 1441 aa6.21□□□□□ -1.42
PATJ-202ENST00000316485 PRAG1Q86YV5 1406 aa6.21□□□□□ -1.42
PATJ-202ENST00000316485 UHRF1BP1Q6BDS2 1440 aa6.2□□□□□ -1.42
PATJ-202ENST00000316485 ZMYM4Q5VZL5 1548 aa6.2□□□□□ -1.42
PATJ-202ENST00000316485 RALGAPBQ86X10 1494 aa6.2□□□□□ -1.42
PATJ-202ENST00000316485 SPATA31E1Q6ZUB1 1445 aa6.2□□□□□ -1.42
PATJ-202ENST00000316485 IDI1Q13907 227 aa6.19□□□□□ -1.42
PATJ-202ENST00000316485 CCDC7Q96M83 1385 aa6.19□□□□□ -1.42
PATJ-202ENST00000316485 KIF7Q2M1P5 1343 aa6.19□□□□□ -1.42
PATJ-202ENST00000316485 ADGRF5Q8IZF2 1346 aa6.19□□□□□ -1.42
PATJ-202ENST00000316485 CFAP70Q5T0N1 1121 aa6.19□□□□□ -1.42
PATJ-202ENST00000316485 LMTK2Q8IWU2 1503 aa6.19□□□□□ -1.42
PATJ-202ENST00000316485 CAMSAP1Q5T5Y3 1602 aa6.18□□□□□ -1.42
PATJ-202ENST00000316485 NOS1P29475 1434 aa6.18□□□□□ -1.42
PATJ-202ENST00000316485 CNTLNQ9NXG0 1405 aa6.17□□□□□ -1.42
PATJ-202ENST00000316485 KIF1BO60333 1816 aa6.17□□□□□ -1.42
PATJ-202ENST00000316485 ARHGEF40Q8TER5 1519 aa6.17□□□□□ -1.42
PATJ-202ENST00000316485 CENPBP07199 599 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms