RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 ADAMTS12P58397 1594 aa17.52■□□□□ 0.4
PCDHB9-201ENST00000316105 C11orf95C9JLR9 678 aaPredicted RBP17.51■□□□□ 0.39
PCDHB9-201ENST00000316105 SRPK2P78362 688 aaKnown RBP17.51■□□□□ 0.39
PCDHB9-201ENST00000316105 MLECQ14165 292 aa17.51■□□□□ 0.39
PCDHB9-201ENST00000316105 UPF2Q9HAU5 1272 aaKnown RBP17.51■□□□□ 0.39
PCDHB9-201ENST00000316105 NUTM2DQ5VT03 806 aaPredicted RBP17.51■□□□□ 0.39
PCDHB9-201ENST00000316105 ABCA5Q8WWZ7 1642 aa17.51■□□□□ 0.39
PCDHB9-201ENST00000316105 NUP153P49790 1475 aaKnown RBP17.5■□□□□ 0.39
PCDHB9-201ENST00000316105 NBPF1Q3BBV0 1214 aa17.5■□□□□ 0.39
PCDHB9-201ENST00000316105 FRAT1Q92837 279 aaPredicted RBP17.5■□□□□ 0.39
PCDHB9-201ENST00000316105 U2SURPO15042 1029 aaKnown RBP17.49■□□□□ 0.39
PCDHB9-201ENST00000316105 TRAK1Q9UPV9 953 aa17.48■□□□□ 0.39
PCDHB9-201ENST00000316105 RAPGEF6Q8TEU7 1601 aa17.47■□□□□ 0.39
PCDHB9-201ENST00000316105 MAPK8IP3Q9UPT6 1336 aa17.47■□□□□ 0.39
PCDHB9-201ENST00000316105 PDE3BQ13370 1112 aa17.47■□□□□ 0.39
PCDHB9-201ENST00000316105 RGS3P49796 1198 aa17.46■□□□□ 0.39
PCDHB9-201ENST00000316105 RPRD2Q5VT52 1461 aaKnown RBP17.46■□□□□ 0.39
PCDHB9-201ENST00000316105 GPATCH8Q9UKJ3 1502 aaKnown RBP17.46■□□□□ 0.38
PCDHB9-201ENST00000316105 KIF14Q15058 1648 aa17.45■□□□□ 0.38
PCDHB9-201ENST00000316105 CCDC146Q8IYE0 955 aa17.45■□□□□ 0.38
PCDHB9-201ENST00000316105 WDR62O43379 1518 aa17.45■□□□□ 0.38
PCDHB9-201ENST00000316105 OSCARQ8IYS5 282 aa17.44■□□□□ 0.38
PCDHB9-201ENST00000316105 CCDC141Q6ZP82 1450 aa17.43■□□□□ 0.38
PCDHB9-201ENST00000316105 TCOF1Q13428 1488 aaKnown RBP17.43■□□□□ 0.38
PCDHB9-201ENST00000316105 SAMD9Q5K651 1589 aa17.43■□□□□ 0.38
PCDHB9-201ENST00000316105 KIAA0556O60303 1618 aa17.43■□□□□ 0.38
PCDHB9-201ENST00000316105 PLEKHH2Q8IVE3 1493 aa17.42■□□□□ 0.38
PCDHB9-201ENST00000316105 NOP58Q9Y2X3 529 aaKnown RBP17.41■□□□□ 0.38
PCDHB9-201ENST00000316105 FTSJ3Q8IY81 847 aaKnown RBP17.41■□□□□ 0.38
PCDHB9-201ENST00000316105 GOLGA2Q08379 1002 aa17.41■□□□□ 0.38
PCDHB9-201ENST00000316105 PBRM1Q86U86 1689 aa17.39■□□□□ 0.38
PCDHB9-201ENST00000316105 LAS1LQ9Y4W2 734 aaKnown RBP17.39■□□□□ 0.37
PCDHB9-201ENST00000316105 DDRGK1Q96HY6 314 aa17.38■□□□□ 0.37
PCDHB9-201ENST00000316105 U2AF1L5P0DN76 240 aaPredicted RBP17.38■□□□□ 0.37
PCDHB9-201ENST00000316105 U2AF1Q01081 240 aaKnown RBP eCLIP17.38■□□□□ 0.37
PCDHB9-201ENST00000316105 BRD4O60885 1362 aaPredicted RBP17.37■□□□□ 0.37
PCDHB9-201ENST00000316105 ATP10BO94823 1461 aa17.37■□□□□ 0.37
PCDHB9-201ENST00000316105 RRP1P56182 461 aaKnown RBP17.37■□□□□ 0.37
PCDHB9-201ENST00000316105 PLIN1O60240 522 aa17.36■□□□□ 0.37
PCDHB9-201ENST00000316105 EIF4G3O43432 1585 aaKnown RBP17.36■□□□□ 0.37
PCDHB9-201ENST00000316105 DISP1Q96F81 1524 aa17.36■□□□□ 0.37
PCDHB9-201ENST00000316105 EXOC6Q8TAG9 804 aa17.35■□□□□ 0.37
PCDHB9-201ENST00000316105 STAC3Q96MF2 364 aa17.35■□□□□ 0.37
PCDHB9-201ENST00000316105 TARBP1Q13395 1621 aaKnown RBP17.35■□□□□ 0.37
PCDHB9-201ENST00000316105 PNISRQ8TF01 805 aaKnown RBP17.34■□□□□ 0.37
PCDHB9-201ENST00000316105 SCAPERQ9BY12 1400 aa17.34■□□□□ 0.37
PCDHB9-201ENST00000316105 MAGI3Q5TCQ9 1506 aa17.34■□□□□ 0.37
PCDHB9-201ENST00000316105 CYB5RLQ6IPT4 315 aa17.34■□□□□ 0.37
PCDHB9-201ENST00000316105 CFAP70Q5T0N1 1121 aa17.34■□□□□ 0.37
PCDHB9-201ENST00000316105 HDGFL2Q7Z4V5 671 aaPredicted RBP17.33■□□□□ 0.36
PCDHB9-201ENST00000316105 TCERG1O14776 1098 aaKnown RBP17.32■□□□□ 0.36
PCDHB9-201ENST00000316105 HSP90AA1P07900 732 aaKnown RBP17.32■□□□□ 0.36
PCDHB9-201ENST00000316105 VGFO15240 615 aaPredicted RBP17.31■□□□□ 0.36
PCDHB9-201ENST00000316105 C14orf37Q86TY3 774 aa17.31■□□□□ 0.36
PCDHB9-201ENST00000316105 ITSN2Q9NZM3 1697 aa17.3■□□□□ 0.36
PCDHB9-201ENST00000316105 MYH16Q9H6N6 1097 aa17.3■□□□□ 0.36
PCDHB9-201ENST00000316105 APAF1O14727 1248 aa17.3■□□□□ 0.36
PCDHB9-201ENST00000316105 CENPJQ9HC77 1338 aaPredicted RBP17.29■□□□□ 0.36
PCDHB9-201ENST00000316105 RRP7AQ9Y3A4 280 aaKnown RBP17.29■□□□□ 0.36
PCDHB9-201ENST00000316105 PLEKHG5O94827 1062 aa17.29■□□□□ 0.36
PCDHB9-201ENST00000316105 PNNQ9H307 717 aaKnown RBP17.28■□□□□ 0.36
PCDHB9-201ENST00000316105 TERF2IPQ9NYB0 399 aa17.27■□□□□ 0.36
PCDHB9-201ENST00000316105 ADAMTS8Q9UP79 889 aa17.27■□□□□ 0.36
PCDHB9-201ENST00000316105 TMEM132EQ6IEE7 984 aa17.27■□□□□ 0.35
PCDHB9-201ENST00000316105 CDCA7LQ96GN5 454 aa17.27■□□□□ 0.35
PCDHB9-201ENST00000316105 HDGFP51858 240 aaKnown RBP17.27■□□□□ 0.35
PCDHB9-201ENST00000316105 CRBNQ96SW2 442 aa17.26■□□□□ 0.35
PCDHB9-201ENST00000316105 ERBINQ96RT1 1412 aa17.26■□□□□ 0.35
PCDHB9-201ENST00000316105 EVC2Q86UK5 1308 aa17.26■□□□□ 0.35
PCDHB9-201ENST00000316105 SOX12O15370 315 aa17.25■□□□□ 0.35
PCDHB9-201ENST00000316105 BECN1Q14457 450 aa17.25■□□□□ 0.35
PCDHB9-201ENST00000316105 MS4A1P11836 297 aa17.25■□□□□ 0.35
PCDHB9-201ENST00000316105 CGNL1Q0VF96 1302 aa17.25■□□□□ 0.35
PCDHB9-201ENST00000316105 ZBTB7CA1YPR0 619 aa17.24■□□□□ 0.35
PCDHB9-201ENST00000316105 DNMT1P26358 1616 aaKnown RBP17.24■□□□□ 0.35
PCDHB9-201ENST00000316105 NUP160Q12769 1436 aa17.23■□□□□ 0.35
PCDHB9-201ENST00000316105 PPP2R1AP30153 589 aa17.23■□□□□ 0.35
PCDHB9-201ENST00000316105 MINK1Q8N4C8 1332 aaPredicted RBP17.23■□□□□ 0.35
PCDHB9-201ENST00000316105 CLUAP1Q96AJ1 413 aa17.22■□□□□ 0.35
PCDHB9-201ENST00000316105 E9PSI1 815 aa17.2■□□□□ 0.34
PCDHB9-201ENST00000316105 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.2■□□□□ 0.34
PCDHB9-201ENST00000316105 SMG6Q86US8 1419 aaKnown RBP17.2■□□□□ 0.34
PCDHB9-201ENST00000316105 PZPP20742 1482 aa17.19■□□□□ 0.34
PCDHB9-201ENST00000316105 IPO9Q96P70 1041 aaKnown RBP17.19■□□□□ 0.34
PCDHB9-201ENST00000316105 SYCP2Q9BX26 1530 aa17.18■□□□□ 0.34
PCDHB9-201ENST00000316105 BCL2L13Q9BXK5 485 aa17.18■□□□□ 0.34
PCDHB9-201ENST00000316105 FANCIQ9NVI1 1328 aa17.17■□□□□ 0.34
PCDHB9-201ENST00000316105 FAM69CQ0P6D2 419 aa17.17■□□□□ 0.34
PCDHB9-201ENST00000316105 RAPGEF3O95398 923 aa17.17■□□□□ 0.34
PCDHB9-201ENST00000316105 CEP170Q5SW79 1584 aa17.17■□□□□ 0.34
PCDHB9-201ENST00000316105 SMC4Q9NTJ3 1288 aa17.16■□□□□ 0.34
PCDHB9-201ENST00000316105 ARXQ96QS3 562 aa17.16■□□□□ 0.34
PCDHB9-201ENST00000316105 PDE4AP27815 886 aa17.15■□□□□ 0.34
PCDHB9-201ENST00000316105 GCC2Q8IWJ2 1684 aa17.14■□□□□ 0.34
PCDHB9-201ENST00000316105 RALGAPBQ86X10 1494 aa17.14■□□□□ 0.33
PCDHB9-201ENST00000316105 ITPRIPQ8IWB1 547 aa17.14■□□□□ 0.33
PCDHB9-201ENST00000316105 CABP2Q9NPB3 220 aa17.14■□□□□ 0.33
PCDHB9-201ENST00000316105 GLIPR1L2Q4G1C9 344 aa17.14■□□□□ 0.33
PCDHB9-201ENST00000316105 ADGRL1O94910 1474 aa17.13■□□□□ 0.33
PCDHB9-201ENST00000316105 CENPQQ7L2Z9 268 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms